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Exchange HTSeq VCF reader for PyVCF #18

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jblachly opened this issue Feb 22, 2017 · 2 comments
Open

Exchange HTSeq VCF reader for PyVCF #18

jblachly opened this issue Feb 22, 2017 · 2 comments
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@jblachly @davidemoeller
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enhancement
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2.0

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@jblachly
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We are already using this in another project. PyVCF is nicely written and very fast.
Library repo
https://github.com/jamescasbon/PyVCF

Documentation
https://pyvcf.readthedocs.io/en/latest/
@jblachly jblachly added this to the 2.0 milestone Feb 22, 2017
@kwkroll32
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Can I ask that we use branch 'issue-14' (or a subsequent branch of that) when we get started on this? Refactoring is already underway.

@jblachly
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Yes, I am all for issue branches, thanks for the heads up

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@davidemoeller davidemoeller

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@jblachly @kwkroll32 @davidemoeller