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ci.yml
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name: Continuous Integration
# TODO: add main here
on:
push:
branches:
- "main"
- "major-bigraph-refactor"
jobs:
test-microservices:
runs-on: ubuntu-latest
steps:
- name: Checkout code
uses: actions/checkout@v2
- name: Set up Python
uses: actions/setup-python@v2
with:
python-version: '3.10'
- name: Install deps and run tests
run: |
pip install --upgrade pip
pip install poetry
poetry env use 3.10
poetry install --only=github
poetry run pytest
build-base-image:
runs-on: ubuntu-latest
steps:
- name: Checkout code
uses: actions/checkout@v2
- name: Get new base image version
run: |
BASE_VERSION=$(cat ./assets/.BASE_VERSION)
echo "BASE_VERSION=$BASE_VERSION" >> $GITHUB_ENV
echo "Base Version: $BASE_VERSION"
- name: Create gcloud config artifact
run: |
echo "$BIOSIMULATIONS_GCLOUD_CONFIG" > ./assets/docker/configs/.biosimulations.json
env:
BIOSIMULATIONS_GCLOUD_CONFIG: ${{ secrets.BIO_JSON_CONTENT }}
- name: Test build base image
run: |
docker build --no-cache -f ./Dockerfile-base -it ghcr.io/biosimulators/bio-compose-server-base:${{ env.BASE_VERSION }} .
get-microservice-versions:
runs-on: ubuntu-latest
steps:
- name: Checkout repository
uses: actions/checkout@v3
# Step 5: Extract API container version
- name: Extract API container version
id: extract_api_version
run: |
API_VERSION=$(python3 .github/parse_container_version.py api)
echo "API_VERSION=$API_VERSION" >> $GITHUB_ENV
echo "API Version: $API_VERSION"
# Step 6: Extract worker container version
- name: Extract worker container version
id: extract_worker_version
run: |
WORKER_VERSION=$(python3 .github/parse_container_version.py worker)
echo "WORKER_VERSION=$WORKER_VERSION" >> $GITHUB_ENV
echo "WORKER Version: $WORKER_VERSION"
# Step 7: Debug output of extracted versions
- name: Debug output of extracted versions
run: |
echo "API_VERSION=${{ env.API_VERSION }}"
echo "WORKER_VERSION=${{ env.WORKER_VERSION }}"
build-microservice-images:
needs: get-microservice-versions
runs-on: ubuntu-latest
steps:
- name: Checkout repository
uses: actions/checkout@v3
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v2
- name: Set up Python
uses: actions/setup-python@v2
with:
python-version: '3.10'
- name: Log in to GHCR
run: echo "${{ secrets.REPO_ADMIN_GHCR_TOKEN }}" | docker login ghcr.io -u "${{ secrets.REPO_ADMIN_GH_USERNAME }}" --password-stdin
- name: Install Docker Compose
run: |
sudo curl -L "https://github.com/docker/compose/releases/download/$(curl -s https://api.github.com/repos/docker/compose/releases/latest | grep 'tag_name' | cut -d\" -f4)/docker-compose-$(uname -s)-$(uname -m)" -o /usr/local/bin/docker-compose
sudo chmod +x /usr/local/bin/docker-compose
docker-compose --version # Check if Docker Compose is installed correctly
- name: Build Docker containers with Docker Compose
run: docker-compose build