From 3d00618a5b681fc91202778ef0a57eee85e5abc9 Mon Sep 17 00:00:00 2001
From: Lucian Smith <lpsmith@uw.edu>
Date: Thu, 10 Oct 2024 14:16:58 -0700
Subject: [PATCH] Add pypdf2 to dependencies.

---
 poetry.lock    | 20 +++++++++++++++++++-
 pyproject.toml |  5 +++--
 2 files changed, 22 insertions(+), 3 deletions(-)

diff --git a/poetry.lock b/poetry.lock
index 753ffc6..dbec9fa 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -2279,6 +2279,24 @@ files = [
 [package.extras]
 diagrams = ["jinja2", "railroad-diagrams"]
 
+[[package]]
+name = "pypdf2"
+version = "3.0.1"
+description = "A pure-python PDF library capable of splitting, merging, cropping, and transforming PDF files"
+optional = false
+python-versions = ">=3.6"
+files = [
+    {file = "PyPDF2-3.0.1.tar.gz", hash = "sha256:a74408f69ba6271f71b9352ef4ed03dc53a31aa404d29b5d31f53bfecfee1440"},
+    {file = "pypdf2-3.0.1-py3-none-any.whl", hash = "sha256:d16e4205cfee272fbdc0568b68d82be796540b1537508cef59388f839c191928"},
+]
+
+[package.extras]
+crypto = ["PyCryptodome"]
+dev = ["black", "flit", "pip-tools", "pre-commit (<2.18.0)", "pytest-cov", "wheel"]
+docs = ["myst_parser", "sphinx", "sphinx_rtd_theme"]
+full = ["Pillow", "PyCryptodome"]
+image = ["Pillow"]
+
 [[package]]
 name = "pyreadline3"
 version = "3.5.4"
@@ -3534,4 +3552,4 @@ pyYaml = "*"
 [metadata]
 lock-version = "2.0"
 python-versions = "^3.10"
-content-hash = "e43d385a9f76aaf4eec33364430d0e47d9224e9129e0f27f1d0d1c73de2d86a5"
+content-hash = "9ff5969aca0d9915120b88514909f7cf7315e53eaa496075f0d7330d3adf2289"
diff --git a/pyproject.toml b/pyproject.toml
index 97884a1..35f0787 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -18,14 +18,15 @@ exclude = ['tests', 'tests.*']
 
 [tool.poetry.dependencies]
 python = "^3.10"
+tellurium = "^2.2.10"
 biosimulators_utils = {version = "^0.2.3", extras = ["logging", "sbml"]}
-docker = "^7.1.0"
 kisao = "^2.34"
 libroadrunner = "^2.7.0"
 lxml = "^4.9.2"
 numpy = "^1.24.4"
 pandas = "^2.0.2"
-tellurium = "^2.2.10"
+docker = "^7.1.0"
+pyPDF2 = "^3.0.1"
 
 [tool.poetry.group.dev.dependencies]
 flake8 = "^7.1.1"