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biosimulators.json
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biosimulators.json
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{
"id": "libsbmlsim",
"name": "LibSBMLSim",
"version": "1.4.0",
"description": "A library for simulating an SBML model which contains Ordinary Differential Equations (ODEs).",
"urls": [{
"type": "Home page",
"url": "https://fun.bio.keio.ac.jp/software/libsbmlsim/"
}],
"image": {
"url": "ghcr.io/biosimulators/biosimulators_libsbmlsim/libsbmlsim:1.4.0",
"format": {
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"id": "format_3973",
"version": null,
"supportedFeatures": []
},
"operatingSystemType": "Linux"
},
"cli": {
"packageRepository": "PyPI",
"package": "biosimulators-libsbmlsim",
"command": "biosimulators-libsbmlsim",
"installationInstructions": "https://docs.biosimulators.org/Biosimulators_LibSBMLSim/installation.html"
},
"pythonApi": {
"package": "biosimulators-libsbmlsim",
"module": "biosimulators_libsbmlsim",
"installationInstructions": "https://docs.biosimulators.org/Biosimulators_LibSBMLSim/installation.html"
},
"authors": [{
"firstName": "Hiromu",
"lastName": "Takizawa",
"identifiers": []
},
{
"firstName": "Akito",
"lastName": "Tabira",
"identifiers": []
},
{
"firstName": "Kazushige",
"lastName": "Nakamura",
"identifiers": []
},
{
"firstName": "Yoichi",
"lastName": "Chikahara",
"identifiers": []
},
{
"firstName": "Tatsuhiro",
"lastName": "Matsui",
"identifiers": []
},
{
"firstName": "Noriko",
"lastName": "Hiroi",
"identifiers": []
},
{
"firstName": "Akira",
"lastName": "Funahashi",
"identifiers": []
},
{
"firstName": "Kazuki",
"lastName": "Hirata",
"identifiers": []
},
{
"firstName": "Keisuke",
"lastName": "Iba",
"identifiers": []
},
{
"firstName": "Suguru",
"lastName": "Sakuma",
"identifiers": []
},
{
"firstName": "Nobuyuki",
"lastName": "Ohta",
"identifiers": []
},
{
"firstName": "Takeshi",
"lastName": "Abe",
"identifiers": []
}
],
"references": {
"identifiers": [{
"namespace": "pypi",
"id": "biosimulators-libsbmlsim",
"url": "https://pypi.org/project/biosimulators-libsbmlsim/"
}],
"citations": [{
"title": "LibSBMLSim: a reference implementation of fully functional SBML simulator",
"authors": "Hiromu Takizawa, Kazushige Nakamura, Akito Tabira, Yoichi Chikahara, Tatsuhiro Matsui, Noriko Hiroi & Akira Funahashi",
"journal": "Bioinformatics",
"volume": "29",
"issue": "11",
"year": 2013,
"pages": "1474-1476",
"identifiers": [{
"namespace": "doi",
"id": "10.1093/bioinformatics/btt157",
"url": "https://doi.org/10.1093/bioinformatics/btt157"
}]
}]
},
"license": {
"namespace": "SPDX",
"id": "GPL-2.0-or-later"
},
"algorithms": [{
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"kisaoId": {
"namespace": "KISAO",
"id": "KISAO_0000030"
},
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"id": "SBO_0000293"
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"modelChangePatterns": [
{
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"types": ["SedAttributeModelChange", "SedComputeAttributeChangeModelChange", "SedSetValueAttributeModelChange"],
"target": {
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"grammar": "XPath"
}
},
{
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