From 954be1db124bc5466e354f2a3460a9359ef97787 Mon Sep 17 00:00:00 2001
From: Deepak <deepakunni3@users.noreply.github.com>
Date: Tue, 19 Jan 2021 09:43:05 -0800
Subject: [PATCH] Fix inferring category for NCBITaxon prefix in
 ObographJsonTransformer

Change OrganismalEntity to OrganismTaxon for NCBITaxon prefix
---
 kgx/transformers/json_transformer.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/kgx/transformers/json_transformer.py b/kgx/transformers/json_transformer.py
index 685fc7de..87b0ade6 100644
--- a/kgx/transformers/json_transformer.py
+++ b/kgx/transformers/json_transformer.py
@@ -375,7 +375,7 @@ def get_category(self, curie: str, node: dict) -> Optional[str]:
             elif prefix == 'PR':
                 category = "biolink:Protein"
             elif prefix == 'NCBITaxon':
-                category = "biolink:OrganismalEntity"
+                category = "biolink:OrganismTaxon"
             else:
                 log.debug(f"{curie} Could not find a category mapping for '{category}'; Defaulting to 'biolink:OntologyClass'")
         return category