From 3093a650c6ac703e752d0178f0910da5e2ab746f Mon Sep 17 00:00:00 2001 From: Will Nickols Date: Fri, 15 Nov 2024 14:50:06 -0500 Subject: [PATCH] Allow either q-values in significant results --- R/utility_scripts.R | 3 +- tests/testthat/expected_results_run1.tsv | 2527 ++++++++++--------- tests/testthat/test_maaslin_write_results.R | 3 +- 3 files changed, 1381 insertions(+), 1152 deletions(-) diff --git a/R/utility_scripts.R b/R/utility_scripts.R index 3e8aaab..4dd020b 100644 --- a/R/utility_scripts.R +++ b/R/utility_scripts.R @@ -333,7 +333,8 @@ write_results <- function(output, ########################################### significant_results <- - fit_data[fit_data$qval_joint <= max_significance & + fit_data[fit_data$qval_joint <= max_significance | + fit_data$qval_individual <= max_significance & is.na(fit_data$error),] significant_results$error <- NULL significant_results_file <- diff --git a/tests/testthat/expected_results_run1.tsv b/tests/testthat/expected_results_run1.tsv index 46c7f10..b4d488d 100644 --- a/tests/testthat/expected_results_run1.tsv +++ b/tests/testthat/expected_results_run1.tsv @@ -1,1151 +1,1378 @@ "feature" "metadata" "value" "name" "coef" "stderr" "pval_individual" "qval_individual" "pval_joint" "qval_joint" "model" "N" "N_not_zero" -"1" "Phocaeicola_sartorii" "reads" "reads" "reads" 1.09514373725997 0.0787239668301347 5.41737101378567e-44 1.05855429609372e-40 1.08347420275714e-43 1.14414875811154e-40 "prevalence" 1527 424 -"2" "Faecalibacterium_prausnitzii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.49194163836917 0.282163617540849 3.54275099714693e-35 3.46126772421255e-32 7.08550199429391e-35 3.74114505298719e-32 "prevalence" 1527 1374 -"3" "Bifidobacterium_longum" "age" "age" "age" -0.672428387468092 0.0593867641608605 1.01111001373663e-29 4.93927241710342e-27 2.02222002747324e-29 7.11821449670581e-27 "prevalence" 1527 843 -"4" "Clostridium_sp_AM49_4BH" "diagnosis" "CD" "diagnosisCD" -1.81049294555846 0.162948238658055 1.11100671030317e-28 4.34181422386478e-26 2.22201342060633e-28 5.86611543040072e-26 "prevalence" 1527 344 -"5" "Phocaeicola_dorei" "reads" "reads" "reads" 0.65950022958877 0.0634326812084893 2.56258274545074e-25 8.34547780768459e-23 5.12516549090151e-25 1.0824349516784e-22 "prevalence" 1527 769 -"6" "GGB16040_SGB9347" "age" "age" "age" 0.959785431885208 0.0943561467875372 2.64574976490589e-24 7.38542148660872e-22 5.2914995298118e-24 9.31303917246876e-22 "prevalence" 1527 114 -"7" "Firmicutes_bacterium_AF16_15" "diagnosis" "UC" "diagnosisUC" -1.67302568460685 0.165975284149971 6.77476366502364e-24 1.65473602518202e-21 1.35495273300473e-23 2.0440429800757e-21 "prevalence" 1527 827 -"8" "Eubacterium_rectale" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.36034123205341 0.237168802828556 2.46774705145763e-23 5.35775304283134e-21 4.93549410291527e-23 6.51485221584816e-21 "prevalence" 1527 1211 -"9" "Phascolarctobacterium_faecium" "age" "age" "age" 0.573582942756144 0.05778324700496 3.19401931541863e-23 6.24111374232801e-21 6.38803863083726e-23 7.49529866018239e-21 "prevalence" 1527 503 -"10" "Dysosmobacter_welbionis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.39540766502285 0.241667222753396 3.69147814631094e-23 6.55740754353779e-21 7.38295629262187e-23 7.7964018450087e-21 "prevalence" 1527 1191 -"11" "Blautia_faecis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.41789548597885 0.248936141086085 2.65630578460566e-22 4.32535125259955e-20 5.31261156921132e-22 5.10010710644287e-20 "prevalence" 1527 1125 -"12" "Fusicatenibacter_saccharivorans" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.34982606021717 0.243286566702391 4.51664499955289e-22 6.78886486855873e-20 9.03328999910582e-22 7.94929519921312e-20 "prevalence" 1527 1119 -"13" "Lachnospira_sp_NSJ_43" "diagnosis" "CD" "diagnosisCD" -1.65444063973956 0.176984858163163 8.93865989505542e-21 1.16440942899589e-18 1.78773197901108e-20 1.45218843833516e-18 "prevalence" 1527 296 -"14" "Bacteroides_ovatus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.12944188701312 0.228316539484205 1.09209356907842e-20 1.33371927123702e-18 2.18418713815684e-20 1.6475011556383e-18 "prevalence" 1527 1176 -"15" "Clostridium_sp_AM49_4BH" "diagnosis" "UC" "diagnosisUC" -1.56682180970953 0.16960646406172 2.51184944378274e-20 2.8871493018538e-18 5.02369888756548e-20 3.5366840168461e-18 "prevalence" 1527 344 -"16" "Bacteroides_faecis" "reads" "reads" "reads" 0.599573256652432 0.0657369505860103 7.4575174133567e-20 8.09554945872166e-18 1.49150348267135e-19 9.84392298563089e-18 "prevalence" 1527 434 -"17" "Dysosmobacter_welbionis" "reads" "reads" "reads" 0.719033593058648 0.0798212170207683 2.09750839877172e-19 2.04926570559997e-17 4.19501679754345e-19 2.6058457283564e-17 "prevalence" 1527 1191 -"18" "Roseburia_sp_AF02_12" "diagnosis" "CD" "diagnosisCD" -1.38133207948781 0.153624019305375 2.43565459307431e-19 2.26631860707962e-17 4.87130918614863e-19 2.85783472254053e-17 "prevalence" 1527 363 -"19" "Clostridiales_bacterium" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.46290899961471 0.275191886061891 3.56166187811641e-19 3.1634033226543e-17 7.12332375623282e-19 3.95906836135887e-17 "prevalence" 1527 985 -"20" "Alistipes_putredinis" "diagnosis" "UC" "diagnosisUC" -1.41881124867536 0.159222447352137 5.06315949565022e-19 4.30148419760892e-17 1.01263189913004e-18 5.34669642740663e-17 "prevalence" 1527 873 -"21" "Parabacteroides_distasonis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.99483627501521 0.225180696004265 8.08625273374346e-19 6.32021513669389e-17 1.61725054674869e-18 8.13245989222198e-17 "prevalence" 1527 1140 -"22" "Clostridium_sp_AT4" "diagnosis" "UC" "diagnosisUC" 1.41495613892002 0.160974676271486 1.49653159586667e-18 1.12470105320134e-16 2.99306319173336e-18 1.43667033203201e-16 "prevalence" 1527 528 -"23" "Gemmiger_formicilis" "diagnosis" "UC" "diagnosisUC" -1.44746012581736 0.164872569095093 1.64545079301112e-18 1.19081883316435e-16 3.29090158602225e-18 1.51095307601717e-16 "prevalence" 1527 472 -"24" "Coprococcus_eutactus" "age" "age" "age" 0.649187236894288 0.0740854074996768 1.906504870912e-18 1.33046804205787e-16 3.81300974182399e-18 1.67772428640256e-16 "prevalence" 1527 177 -"25" "Vescimonas_coprocola" "diagnosis" "CD" "diagnosisCD" -1.19942666904347 0.138951055251296 6.02839829258536e-18 3.9264967545706e-16 1.20567965851707e-17 5.09279087757612e-16 "prevalence" 1527 599 -"26" "Clostridium_fessum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.66453221259049 0.309121800094995 6.7139175862956e-18 4.23193385923277e-16 1.34278351725912e-17 5.45376690086783e-16 "prevalence" 1527 926 -"27" "Bacteroides_thetaiotaomicron" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.05730435377746 0.239353642651514 8.30838472902755e-18 5.07330742516245e-16 1.66167694580551e-17 6.49900316581712e-16 "prevalence" 1527 1062 -"28" "Lacrimispora_amygdalina" "age" "age" "age" -0.490742803277601 0.0576796646885697 1.76847698320534e-17 1.04715273490401e-15 3.53695396641067e-17 1.33393692447488e-15 "prevalence" 1527 865 -"29" "Anaerostipes_hadrus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.00089705073568 0.236827896734184 2.94466328462588e-17 1.59829779393305e-15 5.88932656925177e-17 2.00617059907415e-15 "prevalence" 1527 1128 -"30" "Bacteroides_intestinalis" "age" "age" "age" 0.667370374903454 0.0789696823967667 2.88893802866339e-17 1.59829779393305e-15 5.77787605732681e-17 2.00617059907415e-15 "prevalence" 1527 158 -"31" "GGB9342_SGB14306" "age" "age" "age" 0.804139092158702 0.0958467160502985 4.86783503243169e-17 2.57074314955987e-15 4.86783503243169e-17 1.77256337732685e-15 "prevalence" 1527 92 -"32" "Candidatus_Cibionibacter_quicibialis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.08935377985834 0.250379488214661 7.13657840171801e-17 3.57560876845051e-15 1.4273156803436e-16 4.71014174513389e-15 "prevalence" 1527 933 -"33" "Bacteroides_eggerthii" "reads" "reads" "reads" 0.552230762831585 0.066813745179718 1.39429308388375e-16 6.81112171477211e-15 2.7885861677675e-16 8.92347573685599e-15 "prevalence" 1527 409 -"34" "Veillonella_dispar" "age" "age" "age" -0.527221869668846 0.0642311293655203 2.24531506547714e-16 1.07008430193716e-14 4.49063013095428e-16 1.39473688773168e-14 "prevalence" 1527 526 -"35" "Haemophilus_parainfluenzae" "age" "age" "age" -0.473498884769755 0.0580115331490337 3.29110806724484e-16 1.53114884842772e-14 6.58221613448968e-16 1.9859486394346e-14 "prevalence" 1527 674 -"36" "Bacteroides_caccae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.92045033141674 0.238101054374111 7.28207834780855e-16 3.30911188177161e-14 1.45641566956172e-15 4.27215263071437e-14 "prevalence" 1527 958 -"37" "Clostridium_sp_AF34_10BH" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.32598487705993 0.28889653047911 8.19371769017192e-16 3.63875553786271e-14 1.63874353803439e-15 4.67706263828194e-14 "prevalence" 1527 960 -"38" "Flavonifractor_plautii" "reads" "reads" "reads" 0.610651617235571 0.0766301113808322 1.60195691657354e-15 6.95605292218822e-14 3.20391383314708e-15 8.67521284052131e-14 "prevalence" 1527 1224 -"39" "Escherichia_coli" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 3.53316975073643 0.386785738517075 2.88657986402541e-15 1.22616892484905e-13 2.88657986402541e-15 8.02165351687061e-14 "abundance" 1527 707 -"40" "Bacteroides_ovatus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.9675113987018 0.378504407592304 4.50197310135384e-15 1.87167137022243e-13 9.0039462027077e-15 2.37704179751483e-13 "prevalence" 1527 1176 -"41" "Bifidobacterium_adolescentis" "diagnosis" "CD" "diagnosisCD" -1.16784820511269 0.151190145061628 1.1241031922436e-14 4.57603674509166e-13 2.24820638448719e-14 5.79050229760602e-13 "prevalence" 1527 427 -"42" "Clostridiales_bacterium" "reads" "reads" "reads" 0.507991262659046 0.0659644885899088 1.350257390144e-14 5.38449579661504e-13 2.70051478028797e-14 6.78986573329547e-13 "prevalence" 1527 985 -"43" "GGB9713_SGB15249" "diagnosis" "UC" "diagnosisUC" -1.43590471626305 0.186937600861644 1.5760772106312e-14 6.15930973914672e-13 3.15215442126236e-14 7.74110481128617e-13 "prevalence" 1527 329 -"44" "Clostridium_symbiosum" "diagnosis" "UC" "diagnosisUC" 1.24796785301432 0.163255979820422 2.10183432388165e-14 8.05291033110733e-13 4.20366864776324e-14 9.86460909341773e-13 "prevalence" 1527 539 -"45" "Odoribacter_splanchnicus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.95587588914198 0.25717770402721 2.84566165092546e-14 1.04913638979403e-12 5.69132330185083e-14 1.30652987103358e-12 "prevalence" 1527 757 -"46" "Veillonella_parvula" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 4.0545509254458 0.487773408119981 3.94129173741931e-14 1.42616371387358e-12 3.94129173741931e-14 9.45910016980633e-13 "abundance" 1527 547 -"47" "Veillonella_parvula" "age" "age" "age" -0.462668655010271 0.0614699010142759 5.20183290014423e-14 1.84806936125124e-12 1.04036658002882e-13 2.33750448619241e-12 "prevalence" 1527 547 -"48" "Vescimonas_coprocola" "diagnosis" "UC" "diagnosisUC" -1.12327242940779 0.149406384637398 5.55203037867337e-14 1.93726202855853e-12 1.11040607573464e-13 2.44289336661621e-12 "prevalence" 1527 599 -"49" "Odoribacter_splanchnicus" "diagnosis" "UC" "diagnosisUC" -1.11168846118177 0.148837110014618 8.07072341624673e-14 2.71899888885278e-12 1.61414468324928e-13 3.47864650104334e-12 "prevalence" 1527 757 -"50" "Blautia_wexlerae" "reads" "reads" "reads" 0.657396395548862 0.0880803041046774 8.41882006659178e-14 2.78819905256277e-12 1.68376401331828e-13 3.55610959612822e-12 "prevalence" 1527 1302 -"51" "Blautia_faecis" "reads" "reads" "reads" 0.527824518957148 0.0707520466379199 8.63903110181698e-14 2.8134444621584e-12 1.72780622036332e-13 3.57757523275228e-12 "prevalence" 1527 1125 -"52" "Roseburia_sp_AF02_12" "diagnosis" "UC" "diagnosisUC" -1.22100355194971 0.164616584467821 1.1957058004108e-13 3.83017890820115e-12 2.39141160082146e-13 4.8564050970528e-12 "prevalence" 1527 363 -"53" "Coprococcus_comes" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.51914731620594 0.341044013224675 1.50658737777688e-13 4.74818021963874e-12 3.01317475555352e-13 6.00360856955569e-12 "prevalence" 1527 759 -"54" "Firmicutes_bacterium_AF16_15" "diagnosis" "CD" "diagnosisCD" -1.16457278864629 0.15798943617334 1.69090447067785e-13 5.24448783445163e-12 3.38180894135542e-13 6.61331526309504e-12 "prevalence" 1527 827 -"55" "Dialister_invisus" "age" "age" "age" -0.415727318114717 0.0566862960551625 2.23676813383434e-13 6.82913270861297e-12 4.47353626766817e-13 8.58918963392289e-12 "prevalence" 1527 726 -"56" "Bilophila_wadsworthia" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.14723383540997 0.293076045345147 2.36167924647501e-13 7.09957115017257e-12 4.72335849294945e-13 8.90690458670468e-12 "prevalence" 1527 764 -"57" "Alistipes_shahii" "diagnosis" "UC" "diagnosisUC" -1.07708382249983 0.148519174393121 4.10197183833026e-13 1.19630641374587e-11 8.20394367665882e-13 1.51988851272837e-11 "prevalence" 1527 673 -"58" "Parabacteroides_distasonis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.8849606965823 0.399901698315178 5.42620744548184e-13 1.53663903601036e-11 1.08524148909607e-12 1.97588795256112e-11 "prevalence" 1527 1140 -"59" "Alistipes_onderdonkii" "diagnosis" "UC" "diagnosisUC" -1.09221696818463 0.151910569105113 6.48539023310039e-13 1.78485246696875e-11 1.29707804661965e-12 2.32154985971247e-11 "prevalence" 1527 831 -"60" "Blautia_wexlerae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.66401963032286 0.233823616064911 1.10654577093227e-12 3.00304227278008e-11 2.21309154186332e-12 3.89504111367943e-11 "prevalence" 1527 1302 -"61" "Alistipes_communis" "age" "age" "age" 0.42291130611774 0.059593878271291 1.27903952253278e-12 3.42362085894391e-11 2.55807904506392e-12 4.4284122485041e-11 "prevalence" 1527 407 -"62" "Ruminococcus_lactaris" "diagnosis" "CD" "diagnosisCD" -1.09796410841328 0.15565813407815 1.74235247075371e-12 4.60075233493616e-11 3.48470494150439e-12 5.93523938423973e-11 "prevalence" 1527 379 -"63" "GGB9713_SGB15249" "age" "age" "age" 0.438446861616058 0.0622369623819675 1.85730031116817e-12 4.77521685266133e-11 3.71460062233288e-12 6.2263781860056e-11 "prevalence" 1527 329 -"64" "Eubacterium_rectale" "antibiotics" "Yes" "antibioticsYes" -1.40545105091999 0.20093257524649 2.65940690684724e-12 6.74867674802533e-11 5.31881381368739e-12 8.77604279258419e-11 "prevalence" 1527 1211 -"65" "Blautia_obeum" "reads" "reads" "reads" 0.416940807998322 0.0596816166095911 2.82664163548149e-12 7.0810996868344e-11 5.65328327095498e-12 9.18441097558225e-11 "prevalence" 1527 899 -"66" "Clostridiaceae_bacterium" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.55030391117108 0.222606282816419 3.29967188400338e-12 8.1614669130919e-11 6.59934376799586e-12 1.05589500287934e-10 "prevalence" 1527 1109 -"67" "Akkermansia_muciniphila" "age" "age" "age" 0.402884843658068 0.0579712445775997 3.65970498146367e-12 8.938829417225e-11 7.31940996291392e-12 1.15362640609509e-10 "prevalence" 1527 407 -"68" "Ruthenibacterium_lactatiformans" "reads" "reads" "reads" 0.404201713987728 0.0582452939818321 3.93084044597641e-12 9.48254596473815e-11 7.86168089193735e-12 1.22087279733615e-10 "prevalence" 1527 797 -"69" "Gemmiger_formicilis" "diagnosis" "CD" "diagnosisCD" -0.947778210536067 0.139698396277238 1.16521345405813e-11 2.64747335956928e-10 2.33042690810267e-11 3.56656639848757e-10 "prevalence" 1527 472 -"70" "Eubacterium_rectale" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.59224100757678 0.382744096082115 1.26332243612112e-11 2.83739314963296e-10 2.52664487222628e-11 3.81162426438708e-10 "prevalence" 1527 1211 -"71" "Clostridiaceae_bacterium" "reads" "reads" "reads" 0.459792370167278 0.0679984006036621 1.36276896993157e-11 3.02596655368895e-10 2.72553793984456e-11 4.05375783728993e-10 "prevalence" 1527 1109 -"72" "Clostridium_sp_AF34_10BH" "reads" "reads" "reads" 0.432535160953567 0.064057306759689 1.45503790162731e-11 3.194543887393e-10 2.91007580323345e-11 4.26811117807572e-10 "prevalence" 1527 960 -"73" "Oscillibacter_sp_ER4" "age" "age" "age" 0.384560759107731 0.0571833404569206 1.75533518857811e-11 3.81102773164625e-10 3.5106703771254e-11 5.07844920307455e-10 "prevalence" 1527 458 -"74" "Dorea_longicatena" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.50738546543997 0.224272301693768 1.80198308535173e-11 3.86931313052448e-10 3.60396617067098e-11 5.1429571300386e-10 "prevalence" 1527 1020 -"75" "Ruminococcus_bicirculans" "diagnosis" "CD" "diagnosisCD" -0.903379163423745 0.136807077874152 4.02085097880568e-11 8.44811055116806e-10 8.04170195744968e-11 1.11737332461406e-09 "prevalence" 1527 678 -"76" "Lachnospira_sp_NSJ_43" "diagnosis" "UC" "diagnosisUC" -1.12963506188417 0.171325002529533 4.29514956093764e-11 8.92842791709803e-10 8.5902991216908e-11 1.17809816526045e-09 "prevalence" 1527 296 -"77" "Bacteroides_xylanisolvens" "diagnosis" "UC" "diagnosisUC" -2.50891616005376 0.326415896681732 4.35630420625444e-11 8.96022991475912e-10 4.35630420625444e-11 6.13367632240625e-10 "abundance" 1527 959 -"78" "Enterocloster_bolteae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.74885477482868 0.365500539081191 5.08982855862428e-11 1.03409581917181e-09 1.01796571169895e-10 1.37238126202257e-09 "abundance" 1527 866 -"79" "Enterocloster_bolteae" "diagnosis" "UC" "diagnosisUC" 0.975270754756839 0.148510541353228 5.13343369803814e-11 1.03409581917181e-09 1.02668673958128e-10 1.37238126202257e-09 "prevalence" 1527 866 -"80" "Anaerostipes_hadrus" "antibiotics" "Yes" "antibioticsYes" -1.2763111589527 0.194412615954771 5.20466310502171e-11 1.0377460925727e-09 1.04093262097725e-10 1.37403105968997e-09 "prevalence" 1527 1128 -"81" "Alistipes_shahii" "diagnosis" "CD" "diagnosisCD" -0.898053197805288 0.136976576730745 5.5176304653169e-11 1.08903534638679e-09 1.10352609303293e-10 1.43867105462071e-09 "prevalence" 1527 673 -"82" "Clostridium_sp_1001270H_150608_G6" "diagnosis" "CD" "diagnosisCD" -1.41571819534831 0.216008410430393 5.60175767017732e-11 1.09458344875265e-09 1.12035153400408e-10 1.44279417061989e-09 "prevalence" 1527 141 -"83" "Roseburia_hominis" "diagnosis" "UC" "diagnosisUC" -1.02876876208489 0.157753535088926 6.96692938205993e-11 1.33464509926913e-09 1.39338587636345e-10 1.77278974149374e-09 "prevalence" 1527 876 -"84" "Flavonifractor_plautii" "age" "age" "age" -0.418556325150903 0.0642056087091602 7.07779335389068e-11 1.34271924402936e-09 1.41555867072804e-10 1.77955947177239e-09 "prevalence" 1527 1224 -"85" "Enterocloster_bolteae" "diagnosis" "CD" "diagnosisCD" 0.880867473865516 0.13612510792159 9.73474384733453e-11 1.81158947406587e-09 1.94694876937214e-10 2.41879752994939e-09 "prevalence" 1527 866 -"86" "Collinsella_SGB14861" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.28743358196434 0.35400878146219 1.03658851484857e-10 1.91084335661707e-09 2.07317702958967e-10 2.54566853865895e-09 "prevalence" 1527 593 -"87" "Blautia_obeum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.52922093913241 0.237325760903327 1.16709069557392e-10 2.13130394313219e-09 2.33418139101164e-10 2.83321327460723e-09 "prevalence" 1527 899 -"88" "Alistipes_finegoldii" "diagnosis" "UC" "diagnosisUC" -0.952125681375197 0.147971725631546 1.23871550099116e-10 2.20585620146455e-09 2.47743100182888e-10 2.94679029298832e-09 "prevalence" 1527 639 -"89" "Clostridium_fessum" "reads" "reads" "reads" 0.404954381207481 0.0629384308387789 1.24178189437616e-10 2.20585620146455e-09 2.48356378859811e-10 2.94679029298832e-09 "prevalence" 1527 926 -"90" "GGB33469_SGB15236" "diagnosis" "UC" "diagnosisUC" -1.1841147788213 0.18562794595044 1.78284957005312e-10 3.11043576775339e-09 3.56569913978839e-10 4.13777834243576e-09 "prevalence" 1527 293 -"91" "GGB3175_SGB4191" "diagnosis" "UC" "diagnosisUC" -1.86332142313712 0.29337941642426 2.13594038502769e-10 3.69347567464079e-09 4.27188076959914e-10 4.90337618771379e-09 "prevalence" 1527 154 -"92" "Roseburia_inulinivorans" "antibiotics" "Yes" "antibioticsYes" -1.26125212230481 0.198736033587669 2.20456678775147e-10 3.77870482742664e-09 4.40913357501693e-10 5.00650005937406e-09 "prevalence" 1527 951 -"93" "GGB9453_SGB14844" "age" "age" "age" 0.431435390774637 0.0681484324442692 2.43863283920768e-10 4.14355527635809e-09 4.87726567782064e-10 5.47914101678575e-09 "prevalence" 1527 222 -"94" "Lacrimispora_celerecrescens" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.06738039971956 0.326658159210444 2.46946524410449e-10 4.15977162670704e-09 4.93893048759914e-10 5.49001115253125e-09 "prevalence" 1527 756 -"95" "Ruminococcus_gnavus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.51636579183797 0.341437478241944 2.77074474475114e-10 4.62738053952456e-09 2.77074474475114e-10 3.25100716717467e-09 "abundance" 1527 767 -"96" "Clostridium_sp_AM22_11AC" "reads" "reads" "reads" 0.361727397169615 0.0576958395038867 3.62075013380451e-10 5.99571674699493e-09 7.24150026629803e-10 7.96565029292783e-09 "prevalence" 1527 730 -"97" "Bilophila_wadsworthia" "reads" "reads" "reads" 0.373932448579941 0.0598587188954 4.18633373879678e-10 6.87403035765454e-09 8.37266747584101e-10 9.11498644792589e-09 "prevalence" 1527 764 -"98" "Dialister_invisus" "antibiotics" "Yes" "antibioticsYes" -1.2992076655848 0.208195004286929 4.366200966424e-10 7.10963057366041e-09 8.73240193094162e-10 9.40960861130035e-09 "prevalence" 1527 726 -"99" "Dysosmobacter_welbionis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.35476715013347 0.377636712665423 4.50235061593064e-10 7.27073810208964e-09 9.00470122983415e-10 9.60501464515643e-09 "prevalence" 1527 1191 -"100" "Ruminococcus_bromii" "diagnosis" "UC" "diagnosisUC" -1.00068210292534 0.160584443712045 4.61987387759432e-10 7.39937176788467e-09 9.23974775305428e-10 9.75717362722532e-09 "prevalence" 1527 429 -"101" "Clostridium_sp_AM22_11AC" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.90703320983451 0.306979196354297 5.22294009861316e-10 8.29725605909766e-09 1.04458801944984e-09 1.07095626071751e-08 "prevalence" 1527 730 -"102" "Faecalibacterium_prausnitzii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.83444220146166 0.45996069593685 7.1669860445062e-10 1.11802012978878e-08 1.43339720838758e-09 1.455449473132e-08 "prevalence" 1527 1374 -"103" "Lacrimispora_amygdalina" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.62620575821068 0.26443022373522 7.75570978896504e-10 1.19328007304234e-08 1.5511419571915e-09 1.56000562551831e-08 "prevalence" 1527 865 -"104" "Phocaeicola_vulgatus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.24771045845211 0.365799719873122 8.01411168983038e-10 1.22340423765067e-08 1.60282233732381e-09 1.59677395114523e-08 "prevalence" 1527 1288 -"105" "Prevotella_copri_clade_A" "reads" "reads" "reads" 0.420723165128971 0.0686975805908748 9.10950295658426e-10 1.37984254086555e-08 1.82190059048702e-09 1.79806263883579e-08 "prevalence" 1527 289 -"106" "Oscillospiraceae_bacterium" "age" "age" "age" 0.614959980527969 0.100477326667829 9.33491981694482e-10 1.40311025556232e-08 1.86698396251755e-09 1.82549543001716e-08 "prevalence" 1527 81 -"107" "Clostridium_sp_AF20_17LB" "diagnosis" "UC" "diagnosisUC" 2.15438360709496 0.26244834595507 9.72171121382814e-10 1.45009341311605e-08 9.72171121382814e-10 1.01644822196065e-08 "abundance" 1527 654 -"108" "Bacteroides_uniformis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.12253777821977 0.39593944718432 1.03562580733296e-09 1.53304002085501e-08 1.03562580733296e-09 1.07095626071751e-08 "abundance" 1527 1244 -"109" "Roseburia_hominis" "reads" "reads" "reads" 0.36280646433289 0.0595404197458558 1.10504094219273e-09 1.61138059779447e-08 2.21008188316433e-09 2.14114354919407e-08 "prevalence" 1527 876 -"110" "Clostridium_fessum" "diagnosis" "UC" "diagnosisUC" -0.96769113219533 0.159339431271413 1.25430759280506e-09 1.81549410099339e-08 2.50861518403682e-09 2.40827057667535e-08 "prevalence" 1527 926 -"111" "Ruminococcus_torques" "reads" "reads" "reads" 0.390322704999764 0.0642887619077534 1.26800943542803e-09 1.8218312035488e-08 2.5360188692482e-09 2.41264497831181e-08 "prevalence" 1527 1093 -"112" "Clostridium_sp_AF20_17LB" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.55065801720366 0.420933648736136 1.36524008934279e-09 1.94721104713563e-08 2.7304801768217e-09 2.57445273814617e-08 "prevalence" 1527 654 -"113" "GGB33469_SGB15236" "age" "age" "age" 0.382017643381418 0.0631544446073691 1.45799117060185e-09 2.06443097634494e-08 2.91598233907796e-09 2.72502420359852e-08 "prevalence" 1527 293 -"114" "Coprococcus_eutactus" "diagnosis" "CD" "diagnosisCD" -1.35233655477055 0.223747885534772 1.5032145013477e-09 2.11315189613914e-08 3.00642900043574e-09 2.78490265303521e-08 "prevalence" 1527 177 -"115" "Sutterella_wadsworthensis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.64039530981989 0.390741333919277 2.08760231323879e-09 2.8726583944145e-08 4.17520462211948e-09 3.83392702692015e-08 "abundance" 1527 536 -"116" "Faecalibacterium_SGB15315" "reads" "reads" "reads" 0.354928696293948 0.0593926243299176 2.28721428363551e-09 3.12532637078587e-08 4.57442856203967e-09 4.16430738061542e-08 "prevalence" 1527 619 -"117" "Firmicutes_bacterium_AF16_15" "reads" "reads" "reads" 0.366226825228089 0.0614283826468324 2.49397489637056e-09 3.38418538021394e-08 4.9879497865212e-09 4.50194442270631e-08 "prevalence" 1527 827 -"118" "Lachnospira_eligens" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.41042588693355 0.236715388827642 2.54845112502101e-09 3.43425758502831e-08 5.0969022435474e-09 4.56129556710682e-08 "prevalence" 1527 929 -"119" "Clostridium_leptum" "reads" "reads" "reads" 0.34806457592805 0.0586200636013187 2.89161876755914e-09 3.87001580260997e-08 5.78323752675682e-09 5.1320158220632e-08 "prevalence" 1527 652 -"120" "Clostridium_sp_AF20_17LB" "reads" "reads" "reads" 0.340517146316562 0.057499053361596 3.17788909747079e-09 4.22421448738634e-08 6.35577818484257e-09 5.59308480266146e-08 "prevalence" 1527 654 -"121" "Bacteroides_thetaiotaomicron" "reads" "reads" "reads" 0.387044347264952 0.0654696414735284 3.38360365784502e-09 4.46727131583053e-08 6.76720730424126e-09 5.90592637461055e-08 "prevalence" 1527 1062 -"122" "Roseburia_inulinivorans" "diagnosis" "CD" "diagnosisCD" -0.882509739309594 0.149890711125149 3.91635588672037e-09 5.13594590781987e-08 7.83271175810289e-09 6.7797898496366e-08 "prevalence" 1527 951 -"123" "Waltera_intestinalis" "diagnosis" "CD" "diagnosisCD" -0.810665412550337 0.137764198778112 3.9939960101069e-09 5.20284546916592e-08 7.98799200426177e-09 6.85798337926864e-08 "prevalence" 1527 524 -"124" "Clostridium_sp_AT4" "reads" "reads" "reads" 0.342337858838054 0.0585557815710161 5.02462571466395e-09 6.41707101075383e-08 1.0049251404081e-08 8.55807216347546e-08 "prevalence" 1527 528 -"125" "Anaerostipes_hadrus" "age" "age" "age" -0.363147308433847 0.0623581898907412 5.76035352080535e-09 7.30891609068419e-08 1.1520707008429e-08 9.65544968325479e-08 "prevalence" 1527 1128 -"126" "Eubacterium_ventriosum" "diagnosis" "CD" "diagnosisCD" -0.802021553074345 0.138003867111254 6.18831626495805e-09 7.80127095595357e-08 1.23766324916208e-08 1.02911211898831e-07 "prevalence" 1527 520 -"127" "Eubacterium_siraeum" "age" "age" "age" 0.325976814495884 0.0561198067585968 6.30020574759505e-09 7.89141155820559e-08 1.26004114554975e-08 1.03953394507854e-07 "prevalence" 1527 565 -"128" "Fusicatenibacter_saccharivorans" "antibiotics" "Yes" "antibioticsYes" -1.15543162997613 0.199982136488736 7.57402894020218e-09 9.42653028608603e-08 1.51480578230384e-08 1.24002705900221e-07 "prevalence" 1527 1119 -"129" "GGB33512_SGB15201" "age" "age" "age" 0.482633963700395 0.0844182453781081 1.08308942443545e-08 1.33946628819422e-07 1.08308942443545e-08 9.1499394576307e-08 "prevalence" 1527 121 -"130" "Lachnospira_eligens" "reads" "reads" "reads" 0.341556373484134 0.0599802063933817 1.23745010627074e-08 1.52074057085096e-07 2.47490019722865e-08 2.01038046790266e-07 "prevalence" 1527 929 -"131" "Clostridium_leptum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.59231727930988 0.456565495857779 1.36386229954493e-08 1.65527138714956e-07 2.72772458048866e-08 2.18217966439092e-07 "prevalence" 1527 652 -"132" "Clostridium_sp_AF36_4" "diagnosis" "CD" "diagnosisCD" -0.776311070550406 0.136709210949919 1.35835631592081e-08 1.65527138714956e-07 2.7167126133903e-08 2.18217966439092e-07 "prevalence" 1527 568 -"133" "Collinsella_aerofaciens" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.50382903484685 0.265852879670446 1.54381973595556e-08 1.86211343460319e-07 3.08763944807733e-08 2.45153929110501e-07 "prevalence" 1527 698 -"134" "Collinsella_SGB14861" "diagnosis" "UC" "diagnosisUC" -0.843348723761008 0.149916687574864 1.85025755769785e-08 2.2180388145654e-07 3.70051508116117e-08 2.87334112184279e-07 "prevalence" 1527 593 -"135" "GGB9708_SGB15234" "age" "age" "age" 0.357564084832923 0.0637246449609789 2.01067706700582e-08 2.39564816398132e-07 4.0213540935834e-08 3.09967147651392e-07 "prevalence" 1527 282 -"136" "Bacteroides_uniformis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.97702094438259 0.353153237038414 2.16594133690176e-08 2.56499961957941e-07 4.33188262689049e-08 3.31483192318577e-07 "prevalence" 1527 1244 -"137" "Bacteroides_uniformis" "reads" "reads" "reads" 0.446555321243741 0.0802781695141451 2.65785098846837e-08 3.1098448092618e-07 5.31570190629501e-08 4.00955800931967e-07 "prevalence" 1527 1244 -"138" "Ruthenibacterium_lactatiformans" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.33289703344804 0.239864625641965 2.74651939449632e-08 3.17556147742355e-07 5.49303871355893e-08 4.11393537696329e-07 "prevalence" 1527 797 -"139" "Bilophila_wadsworthia" "diagnosis" "UC" "diagnosisUC" -0.827610360629959 0.14901633188566 2.79488177846988e-08 3.21246999713538e-07 5.5897634788261e-08 4.15689453073265e-07 "prevalence" 1527 764 -"140" "Enterocloster_bolteae" "reads" "reads" "reads" 0.313059825603443 0.0564835579301444 2.98192277580942e-08 3.40741351107111e-07 5.96384546270019e-08 4.40407049553245e-07 "prevalence" 1527 866 -"141" "Parasutterella_excrementihominis" "diagnosis" "CD" "diagnosisCD" -0.748659829795594 0.135235100340749 3.09479577346296e-08 3.51583194264338e-07 6.18959145114829e-08 4.53903373084208e-07 "prevalence" 1527 699 -"142" "Bacteroides_fragilis" "diagnosis" "CD" "diagnosisCD" 1.7480024850774 0.279907319609918 3.14210990559616e-08 3.54894956967335e-07 3.14210990559616e-08 2.47617019426085e-07 "abundance" 1527 787 -"143" "GGB3746_SGB5089" "antibiotics" "Yes" "antibioticsYes" -1.27826144671252 0.231536136779606 3.37486728495089e-08 3.7682803855966e-07 6.74973445600449e-08 4.91566867968327e-07 "prevalence" 1527 651 -"144" "Clostridium_symbiosum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.66672195928922 0.447010318038185 3.57871448031233e-08 3.95073903645779e-07 3.57871448031233e-08 2.79934999348875e-07 "abundance" 1527 539 -"145" "Bacteroides_fragilis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.79490695005213 0.478001382815327 3.87634658816083e-08 4.25527035576756e-07 7.75269302606102e-08 5.60742728460304e-07 "abundance" 1527 787 -"146" "Oscillospiraceae_bacterium" "diagnosis" "UC" "diagnosisUC" -4.04635095127963 0.642943454840981 4.60626162768207e-08 5.00035290027265e-07 4.60626162768207e-08 3.49943329412393e-07 "abundance" 1527 81 -"147" "Clostridium_sp_AF34_10BH" "diagnosis" "UC" "diagnosisUC" -0.920119743769929 0.168573185440937 4.80767518851309e-08 5.1901642642843e-07 9.61535014588875e-08 6.90735357418947e-07 "prevalence" 1527 960 -"148" "Faecalibacterium_prausnitzii" "age" "age" "age" -0.560281398171785 0.103038801113628 5.4010061295689e-08 5.79866262482288e-07 1.08020119674291e-07 7.65565411919809e-07 "prevalence" 1527 1374 -"149" "Clostridium_sp_AF36_4" "diagnosis" "UC" "diagnosisUC" -0.801909503082171 0.14821390163215 6.28533135093423e-08 6.7112226555877e-07 1.25706623068146e-07 8.84974626399746e-07 "prevalence" 1527 568 -"150" "Roseburia_hominis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.27382735075456 0.236182192006337 6.91330343532076e-08 7.34162766990042e-07 1.38266063927039e-07 9.66946778191744e-07 "prevalence" 1527 876 -"151" "Faecalibacterium_SGB15315" "diagnosis" "CD" "diagnosisCD" -0.740133977820123 0.137364755468718 7.12094917025336e-08 7.52126198847301e-07 1.42418978334276e-07 9.89437112638125e-07 "prevalence" 1527 619 -"152" "Clostridium_sp_AT4" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 3.31872997643215 0.594164203030907 7.26386466531892e-08 7.63096320216837e-07 1.45277288030005e-07 1.00269814483455e-06 "abundance" 1527 528 -"153" "Roseburia_faecis" "age" "age" "age" 0.314340417965388 0.0584690667026871 7.60813536451735e-08 7.94989117768284e-07 1.52162701501974e-07 1.04340138172782e-06 "prevalence" 1527 922 -"154" "Clostridium_sp_AT4" "diagnosis" "CD" "diagnosisCD" 0.813879892325335 0.151529228306779 7.82542022442188e-08 8.13344208431933e-07 1.56508398364717e-07 1.06627657208478e-06 "prevalence" 1527 528 -"155" "Akkermansia_sp_KLE1798" "diagnosis" "CD" "diagnosisCD" -1.52069767676839 0.285338174083823 9.85065586242768e-08 1.01842230450707e-06 9.85065586242768e-08 7.02857607481326e-07 "prevalence" 1527 70 -"156" "Fusicatenibacter_saccharivorans" "reads" "reads" "reads" 0.366832564760869 0.0689479007827118 1.03521574361045e-07 1.06463766474464e-06 2.07043138005374e-07 1.39259588365398e-06 "prevalence" 1527 1119 -"157" "Lacrimispora_amygdalina" "reads" "reads" "reads" 0.313449103176252 0.0590674494040284 1.1167048434326e-07 1.14242998118707e-06 2.23340956216223e-07 1.4833210677002e-06 "prevalence" 1527 865 -"158" "Alistipes_communis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.00479841433725 0.378384848412195 1.16882475752427e-07 1.18952269593876e-06 2.33764937843341e-07 1.54284858976605e-06 "prevalence" 1527 407 -"159" "GGB3746_SGB5089" "reads" "reads" "reads" 0.303576819105877 0.0575490969863641 1.32689026817903e-07 1.34339045804239e-06 2.65378036029428e-07 1.7406161866278e-06 "prevalence" 1527 651 -"160" "Roseburia_hominis" "diagnosis" "CD" "diagnosisCD" -0.780004734447743 0.147994128171274 1.36044201660469e-07 1.37025963940493e-06 2.72088384812913e-07 1.77361317507677e-06 "prevalence" 1527 876 -"161" "Roseburia_inulinivorans" "reads" "reads" "reads" 0.319870964059402 0.0608511596902514 1.46733065126239e-07 1.47034056029062e-06 2.93466108721885e-07 1.90122828717982e-06 "prevalence" 1527 951 -"162" "Bacteroides_stercoris" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.3717404037312 0.451422415083931 1.48889934030768e-07 1.48434148518428e-06 2.97779845893323e-07 1.91741169063017e-06 "prevalence" 1527 826 -"163" "Clostridium_sp_AF34_10BH" "antibiotics" "Yes" "antibioticsYes" -1.04506740679588 0.198965412643974 1.50042005951979e-07 1.48823390675212e-06 3.00083989391354e-07 1.92053753210467e-06 "prevalence" 1527 960 -"164" "Faecalibacterium_SGB15315" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.61971591045963 0.50262425860983 1.86738861190195e-07 1.83360670736503e-06 3.73477687508988e-07 2.37585806029814e-06 "prevalence" 1527 619 -"165" "Klebsiella_pneumoniae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 3.69228958172105 0.654175508718895 1.89331146316363e-07 1.84976529951086e-06 1.89331146316363e-07 1.28162622121846e-06 "abundance" 1527 119 -"166" "Fusicatenibacter_saccharivorans" "diagnosis" "UC" "diagnosisUC" -0.969122774168081 0.186406542667602 2.00391519127968e-07 1.94808471828881e-06 4.00782998099176e-07 2.53429249097443e-06 "prevalence" 1527 1119 -"167" "Lactobacillus_acidophilus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.3488242959603 0.452972502221417 2.15601054132398e-07 2.08556663254805e-06 2.15601054132398e-07 1.44097919723932e-06 "prevalence" 1527 26 -"168" "Ruminococcus_bromii" "age" "age" "age" 0.297750395046856 0.0576561767223427 2.4141641791072e-07 2.32378167782043e-06 4.82832777539553e-07 3.03494888739147e-06 "prevalence" 1527 429 -"169" "Parabacteroides_merdae" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.50397692144411 0.485067624332875 2.44169655055056e-07 2.33876228420382e-06 4.88339250491291e-07 3.05139792022961e-06 "prevalence" 1527 826 -"170" "Akkermansia_muciniphila" "diagnosis" "UC" "diagnosisUC" -0.842338934083437 0.165942988110716 3.85312710295866e-07 3.63720307206822e-06 7.70625272125847e-07 4.7039322969069e-06 "prevalence" 1527 407 -"171" "GGB9708_SGB15234" "diagnosis" "UC" "diagnosisUC" -0.960025060546137 0.18912637284391 3.85253307572991e-07 3.63720307206822e-06 7.70506466725872e-07 4.7039322969069e-06 "prevalence" 1527 282 -"172" "Prevotella_copri_clade_A" "age" "age" "age" -0.386535115021869 0.0762842529631017 4.04056247370353e-07 3.79579763154649e-06 8.08112331479256e-07 4.90440587380514e-06 "prevalence" 1527 289 -"173" "Faecalibacterium_SGB15346" "reads" "reads" "reads" 0.287464939519249 0.0569740198940365 4.52232169036207e-07 4.22804621194617e-06 9.04464133558481e-07 5.45779500021575e-06 "prevalence" 1527 743 -"174" "Bacteroides_xylanisolvens" "reads" "reads" "reads" 0.30171101542261 0.0599098745450371 4.75158125725052e-07 4.42123322698454e-06 9.5031602567486e-07 5.70189615404916e-06 "prevalence" 1527 959 -"175" "Candidatus_Cibionibacter_quicibialis" "reads" "reads" "reads" 0.299169129497617 0.0595607729424649 5.0891159801403e-07 4.71285906407305e-06 1.01782293703705e-06 6.07243514978034e-06 "prevalence" 1527 933 -"176" "GGB6601_SGB9333" "age" "age" "age" 0.533097705362222 0.106572928937349 5.66836058358365e-07 5.22451725486908e-06 5.66836058358365e-07 3.52105222133196e-06 "prevalence" 1527 69 -"177" "Oscillibacter_sp_ER4" "diagnosis" "UC" "diagnosisUC" -0.789291349088083 0.158307659816794 6.1703896397939e-07 5.66053584796117e-06 1.2340775472217e-06 7.25566929489219e-06 "prevalence" 1527 458 -"178" "Blautia_obeum" "diagnosis" "UC" "diagnosisUC" 1.61527308642655 0.225035175794205 6.48189288021683e-07 5.91851340558116e-06 6.48189288021683e-07 4.00285314708127e-06 "abundance" 1527 899 -"179" "Blautia_wexlerae" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.85640045000302 0.373413410288811 6.64591898577533e-07 6.04005846428139e-06 1.32918335547268e-06 7.75479349933229e-06 "prevalence" 1527 1302 -"180" "Roseburia_inulinivorans" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.87267941299064 0.377179684571656 6.87177034400715e-07 6.21640706119906e-06 1.37435359658915e-06 7.97427141757223e-06 "prevalence" 1527 951 -"181" "Clostridium_sp_AF36_4" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.7638590209868 0.357673004909349 8.16068793712488e-07 7.3483798290977e-06 1.6321369214567e-06 9.36704667966454e-06 "prevalence" 1527 568 -"182" "Eisenbergiella_massiliensis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.61255892030398 0.328932186934304 9.46702222711084e-07 8.4855786384287e-06 1.89340354917707e-06 1.07496459566182e-05 "prevalence" 1527 417 -"183" "Phascolarctobacterium_succinatutens" "diagnosis" "CD" "diagnosisCD" -1.25387988179355 0.255835446333731 9.52924711129005e-07 8.50235107555286e-06 1.90584851419251e-06 1.07624386683812e-05 "prevalence" 1527 125 -"184" "Gemmiger_formicilis" "antibiotics" "Yes" "antibioticsYes" 0.937621333342216 0.191440220850621 9.69531627148956e-07 8.61120363385936e-06 1.93906231430634e-06 1.08341259466005e-05 "prevalence" 1527 472 -"185" "Alistipes_putredinis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.32674239480827 0.577238138876982 1.04629184205507e-06 9.25092425056835e-06 1.04629184205507e-06 6.20721452365255e-06 "abundance" 1527 873 -"186" "Faecalibacterium_prausnitzii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.18366823474475 0.309490360335197 1.06123665544189e-06 9.34079470600653e-06 7.08550199429391e-35 3.74114505298719e-32 "abundance" 1527 1374 -"187" "Ruminococcus_torques" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.73977108181417 0.35678739102336 1.08142193639828e-06 9.47577786422531e-06 2.16284270332316e-06 1.18956348682774e-05 "prevalence" 1527 1093 -"188" "Blautia_wexlerae" "age" "age" "age" -0.367451191112025 0.0755019840906123 1.13433874302303e-06 9.89507992797768e-06 2.26867619932168e-06 1.23490828169262e-05 "prevalence" 1527 1302 -"189" "Dorea_longicatena" "antibiotics" "Yes" "antibioticsYes" -0.901701150360491 0.18571365938799 1.20186265582022e-06 1.04375094643232e-05 2.40372386716661e-06 1.30170892498869e-05 "prevalence" 1527 1020 -"190" "Enterocloster_clostridioformis" "age" "age" "age" 0.913795563005725 0.155178611401843 1.23676181162935e-06 1.06930645129369e-05 1.23676181162935e-06 7.25566929489219e-06 "abundance" 1527 312 -"191" "Phocaeicola_plebeius" "diagnosis" "CD" "diagnosisCD" -3.905310328259 0.731851638990529 1.25165566267071e-06 1.07741637218439e-05 2.50330975869953e-06 1.3487219924422e-05 "abundance" 1527 127 -"192" "Bifidobacterium_longum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.80374402311812 0.373904474388186 1.40652985772118e-06 1.19493884434226e-05 2.81305773711613e-06 1.50029745979527e-05 "prevalence" 1527 843 -"193" "Bacteroides_caccae" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.95320300516516 0.4061473976541 1.51612182196175e-06 1.28246841563344e-05 3.03224134529812e-06 1.60906877418835e-05 "prevalence" 1527 958 -"194" "GGB33469_SGB15236" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -6.4465254020086 1.24279003064576 1.58027467334065e-06 1.33097272056364e-05 1.58027467334065e-06 9.11896204944115e-06 "abundance" 1527 293 -"195" "Lachnospira_sp_NSJ_43" "age" "age" "age" 0.837033159421331 0.139181747479856 1.67119558325268e-06 1.40150908569774e-05 1.67119558325268e-06 9.5393650589991e-06 "abundance" 1527 296 -"196" "Alistipes_putredinis" "diagnosis" "UC" "diagnosisUC" -1.40391463595766 0.224512508889426 1.6978587995542e-06 1.41778465569611e-05 1.01263189913004e-18 5.34669642740663e-17 "abundance" 1527 873 -"197" "Dysosmobacter_welbionis" "diagnosis" "UC" "diagnosisUC" 1.33400315882702 0.160934962628569 1.93610018994761e-06 1.60302532676171e-05 1.93610018994761e-06 1.08341259466005e-05 "abundance" 1527 1191 -"198" "Clostridium_sp_AF34_10BH" "diagnosis" "CD" "diagnosisCD" -0.757639904244175 0.15914654554239 1.92977045294436e-06 1.60302532676171e-05 3.85953718187472e-06 2.02769714629836e-05 "prevalence" 1527 960 -"199" "Parasutterella_SGB9260" "diagnosis" "CD" "diagnosisCD" 1.94361850449468 0.379778567276142 1.95027717087015e-06 1.60795003876805e-05 1.95027717087015e-06 1.08394352233625e-05 "abundance" 1527 269 -"200" "Lacrimispora_celerecrescens" "diagnosis" "UC" "diagnosisUC" 1.46603533121906 0.202700483716219 2.00744029754674e-06 1.64812535353207e-05 2.00744029754674e-06 1.10987275089495e-05 "abundance" 1527 756 -"201" "Clostridiaceae_bacterium" "diagnosis" "UC" "diagnosisUC" -0.893374083384489 0.188250768566003 2.07827877939083e-06 1.69914507737643e-05 4.15655323953897e-06 2.17293080245205e-05 "prevalence" 1527 1109 -"202" "Bacteroides_salyersiae" "age" "age" "age" 1.15577792865701 0.21242807807593 2.21759371155095e-06 1.8054908801544e-05 2.21759371155095e-06 1.21335697378124e-05 "abundance" 1527 150 -"203" "Akkermansia_sp_KLE1798" "diagnosis" "UC" "diagnosisUC" -2.86092910206765 0.608911767602315 2.62169464152527e-06 2.10240210737103e-05 2.62169464152527e-06 1.40533479261456e-05 "prevalence" 1527 70 -"204" "Eubacterium_ventriosum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.36173226745263 0.502694318844274 2.62531276457795e-06 2.10240210737103e-05 5.25061863688878e-06 2.71796729438948e-05 "prevalence" 1527 520 -"205" "Lachnospira_eligens" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.71015647448783 0.36523610181603 2.83630423296833e-06 2.23473325452424e-05 5.67260042131495e-06 2.92208099751638e-05 "prevalence" 1527 929 -"206" "Clostridiaceae_bacterium" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.74018735115521 0.371782055549331 2.8594550363506e-06 2.24392575944942e-05 5.71890189621809e-06 2.93163126330403e-05 "prevalence" 1527 1109 -"207" "Dysosmobacter_sp_BX15" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.82596312761118 0.723678027010375 3.16333579153394e-06 2.46261280344913e-05 3.16333579153394e-06 1.67024129792992e-05 "abundance" 1527 621 -"208" "GGB3278_SGB4328" "diagnosis" "CD" "diagnosisCD" -0.904532331757244 0.194098318066265 3.15939052060817e-06 2.46261280344913e-05 6.31877105946789e-06 3.22348900425029e-05 "prevalence" 1527 179 -"209" "Alistipes_onderdonkii" "diagnosis" "CD" "diagnosisCD" -0.658231265563004 0.14241634868105 3.80278081577414e-06 2.93700937313149e-05 7.60554717040635e-06 3.8612777942063e-05 "prevalence" 1527 831 -"210" "GGB9480_SGB14874" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.32408776382515 0.50447881815491 4.0869969979682e-06 3.14409139135034e-05 8.17397729239193e-06 4.13000957931382e-05 "prevalence" 1527 332 -"211" "Parasutterella_excrementihominis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.23581139754766 0.269219389752885 4.42502014713973e-06 3.35135246802753e-05 8.85002071347616e-06 4.4292046793511e-05 "prevalence" 1527 699 -"212" "Phocaeicola_plebeius" "diagnosis" "UC" "diagnosisUC" -3.66721507138556 0.751243317778674 4.79546287790455e-06 3.61788975421834e-05 9.59090275934489e-06 4.77735533673029e-05 "abundance" 1527 127 -"213" "Clostridiales_bacterium" "age" "age" "age" 0.291368159955626 0.0638571658787858 5.04733192280108e-06 3.79326406813589e-05 1.00946383700426e-05 5.00466578345776e-05 "prevalence" 1527 985 -"214" "Bacteroides_finegoldii" "antibiotics" "Yes" "antibioticsYes" 2.69699755560915 0.571048118385532 5.16002764749945e-06 3.86310115831951e-05 5.16002764749945e-06 2.68423113091597e-05 "abundance" 1527 333 -"215" "Flavonifractor_plautii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.05844553490533 0.232942255325107 5.52462495563114e-06 4.12027372645162e-05 1.10492193897814e-05 5.42696543051588e-05 "prevalence" 1527 1224 -"216" "Lacrimispora_celerecrescens" "reads" "reads" "reads" 0.256838247285638 0.0565710964196747 5.62284383790111e-06 4.17758055485124e-05 1.12456560594294e-05 5.49787629572104e-05 "prevalence" 1527 756 -"217" "Bacteroides_xylanisolvens" "age" "age" "age" -0.252944783253537 0.0557651731182955 5.73606237967187e-06 4.24555526131774e-05 1.14720918569321e-05 5.58273225848863e-05 "prevalence" 1527 959 -"218" "GGB33469_SGB15236" "diagnosis" "CD" "diagnosisCD" -0.70726512828331 0.156706969525634 6.38274779840381e-06 4.70637328229473e-05 1.27654548573381e-05 6.1836331786005e-05 "prevalence" 1527 293 -"219" "Veillonella_rogosae" "age" "age" "age" -0.407597827543776 0.0903305354725168 6.4130563707827e-06 4.71094441673285e-05 1.28260716142734e-05 6.18462631263593e-05 "prevalence" 1527 207 -"220" "Faecalibacterium_SGB15315" "age" "age" "age" -0.261673493436863 0.0580818779364126 6.62942402109698e-06 4.83354273776996e-05 1.32588040929311e-05 6.36422596460693e-05 "prevalence" 1527 619 -"221" "Parabacteroides_distasonis" "reads" "reads" "reads" -0.0319735324875691 0.0603305375203703 7.02648705686038e-06 5.10399840487181e-05 1.40529247422004e-05 6.6846344719656e-05 "abundance" 1527 1140 -"222" "Bacteroides_salyersiae" "reads" "reads" "reads" 0.37673354857507 0.0840416362280285 7.37040757778748e-06 5.33399126185064e-05 1.47407608326671e-05 6.98037822389976e-05 "prevalence" 1527 150 -"223" "Faecalibacterium_SGB15315" "diagnosis" "UC" "diagnosisUC" -0.662628623942392 0.147924923241451 7.48206248337747e-06 5.39481553229505e-05 1.49640689854959e-05 7.05448966459094e-05 "prevalence" 1527 619 -"224" "Clostridium_sp_AF36_4" "age" "age" "age" 0.250170140950297 0.0558686575493138 7.54069366665076e-06 5.4171012590572e-05 1.50813304712405e-05 7.0781711011689e-05 "prevalence" 1527 568 -"225" "Waltera_intestinalis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.6794613939923 0.375205367575039 7.60144806958618e-06 5.44074341683934e-05 1.52028383571596e-05 7.10362712617723e-05 "prevalence" 1527 524 -"226" "Prevotella_copri_clade_B" "age" "age" "age" 2.91847979859574 0.546431039486533 8.40281242364682e-06 5.97058017302032e-05 8.40281242364682e-06 4.22541424731954e-05 "abundance" 1527 40 -"227" "Vescimonas_coprocola" "reads" "reads" "reads" 0.259152911381333 0.0582935622264414 8.76255590884751e-06 6.20363559633625e-05 1.7525035035309e-05 8.15261541730673e-05 "prevalence" 1527 599 -"228" "Bacteroides_thetaiotaomicron" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.59190198245345 0.358567221215058 9.01181172813418e-06 6.3570686342145e-05 1.80235422435177e-05 8.34774588120821e-05 "prevalence" 1527 1062 -"229" "Alistipes_putredinis" "age" "age" "age" 0.265293466511859 0.0599136801099253 9.51426130641751e-06 6.68736208371936e-05 1.90284320916668e-05 8.73653229947832e-05 "prevalence" 1527 873 -"230" "Parasutterella_excrementihominis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.88492323185135 0.426169890355157 9.73674471089328e-06 6.81921117028153e-05 1.9473394617589e-05 8.86375203283362e-05 "prevalence" 1527 699 -"231" "Alistipes_dispar" "antibiotics" "Yes" "antibioticsYes" 4.66923749068707 0.986954815878206 1.02297900346215e-05 7.13893204558946e-05 1.02297900346215e-05 5.04797115727119e-05 "abundance" 1527 83 -"232" "Escherichia_coli" "antibiotics" "Yes" "antibioticsYes" 2.02007770779435 0.439419839345034 1.07140413274642e-05 7.45026218998758e-05 2.14279678642469e-05 9.71155968439688e-05 "abundance" 1527 707 -"233" "Vescimonas_coprocola" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.38989422824519 0.316759575717443 1.1447547796499e-05 7.93209517530462e-05 2.28949645466474e-05 0.000103320865646409 "prevalence" 1527 599 -"234" "Fusicatenibacter_saccharivorans" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.63217581413997 0.372068124647702 1.15048423483359e-05 7.94362613026441e-05 2.30095523352743e-05 0.000103396116025743 "prevalence" 1527 1119 -"235" "Bacteroides_uniformis" "diagnosis" "CD" "diagnosisCD" 0.864615652807116 0.197202253447422 1.16300224647149e-05 7.99662321286257e-05 2.32599096720072e-05 0.000103936950155055 "prevalence" 1527 1244 -"236" "Roseburia_sp_AF02_12" "reads" "reads" "reads" 0.28949643585455 0.0660379979492996 1.16634473677883e-05 7.99662321286257e-05 2.33267586995721e-05 0.000103936950155055 "prevalence" 1527 363 -"237" "Odoribacter_splanchnicus" "antibiotics" "Yes" "antibioticsYes" 0.877106859928885 0.201367328041084 1.32608693824351e-05 8.96599957552879e-05 2.65215629142135e-05 0.000117675506039535 "prevalence" 1527 757 -"238" "Alistipes_putredinis" "diagnosis" "CD" "diagnosisCD" -0.650867907082522 0.149847737676372 1.40212329990576e-05 9.41494476981393e-05 2.80422694031404e-05 0.000123902244726846 "prevalence" 1527 873 -"239" "GGB1680_SGB2312" "age" "age" "age" 1.16639875218103 0.268512140292984 1.39954203422138e-05 9.41494476981393e-05 1.39954203422138e-05 6.6846344719656e-05 "prevalence" 1527 12 -"240" "Waltera_intestinalis" "diagnosis" "UC" "diagnosisUC" -0.638340475666128 0.147288785070007 1.4646538095015e-05 9.80114227317102e-05 2.92928616689519e-05 0.000128353783910428 "prevalence" 1527 524 -"241" "Phascolarctobacterium_faecium" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.21662308611554 0.281297101096002 1.52499583480121e-05 0.000101701087413023 3.04996841347947e-05 0.000133089530770013 "prevalence" 1527 503 -"242" "GGB9713_SGB15249" "diagnosis" "CD" "diagnosisCD" -0.648591398518527 0.150158806021359 1.56475455370527e-05 0.000103645098235258 3.12948462284242e-05 0.000135439990234491 "prevalence" 1527 329 -"243" "Phascolarctobacterium_faecium" "reads" "reads" "reads" 0.259558129624767 0.0601716883804979 1.60598901491255e-05 0.000105660018018152 3.21195223781793e-05 0.00013844169645452 "prevalence" 1527 503 -"244" "Ruminococcus_bicirculans" "reads" "reads" "reads" 0.240396114126552 0.0561197363663511 1.8386964808217e-05 0.000120564192064618 3.67735915359591e-05 0.00015721826988653 "prevalence" 1527 678 -"245" "Prevotella_copri_clade_B" "diagnosis" "UC" "diagnosisUC" -7.40394923116873 1.4840094772915 1.8899788862492e-05 0.000123512332566252 1.8899788862492e-05 8.71536115231072e-05 "abundance" 1527 40 -"246" "Eisenbergiella_massiliensis" "diagnosis" "CD" "diagnosisCD" 0.65267190245544 0.152624978458298 1.90015571614987e-05 0.000123763475645228 3.80027532638227e-05 0.00016181817518789 "prevalence" 1527 417 -"247" "Bacteroides_cellulosilyticus" "diagnosis" "UC" "diagnosisUC" -1.7619650568615 0.368886694524202 1.94360644585334e-05 0.000126172989873669 1.94360644585334e-05 8.86375203283362e-05 "abundance" 1527 433 -"248" "Parasutterella_excrementihominis" "diagnosis" "CD" "diagnosisCD" 1.21006474942789 0.248679044795565 1.99567930314615e-05 0.000129124415839324 6.18959145114829e-08 4.53903373084208e-07 "abundance" 1527 699 -"249" "Bacteroides_finegoldii" "age" "age" "age" 0.261212079085869 0.0612638277994342 2.01047371755128e-05 0.0001293010561119 4.02090701505688e-05 0.000169264904489448 "prevalence" 1527 333 -"250" "Coprococcus_comes" "reads" "reads" "reads" 0.242292907307477 0.0568283190549915 2.01164386172044e-05 0.0001293010561119 4.02324725633063e-05 0.000169264904489448 "prevalence" 1527 759 -"251" "Ruminococcus_bromii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.53145612749782 0.359314076025547 2.02455237790497e-05 0.000129704109718895 4.04906376768663e-05 0.000169633942165418 "prevalence" 1527 429 -"252" "Ruminococcus_torques" "diagnosis" "CD" "diagnosisCD" -0.695923714437689 0.16379138231605 2.14878344227347e-05 0.000137213164908574 4.29752071184412e-05 0.00017727272936357 "prevalence" 1527 1093 -"253" "Acidaminococcus_intestini" "diagnosis" "CD" "diagnosisCD" 0.930577937963633 0.21947262223007 2.23456187152892e-05 0.000142225859836076 4.46907381039028e-05 0.000182920230378765 "prevalence" 1527 173 -"254" "Dorea_longicatena" "reads" "reads" "reads" 0.25459920622627 0.0602878171445266 2.41005192671961e-05 0.000152402636401622 4.82004576993634e-05 0.000195017943795125 "prevalence" 1527 1020 -"255" "Lacrimispora_amygdalina" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.57875529381257 0.373814961277439 2.40686505473547e-05 0.000152402636401622 4.81367217947703e-05 0.000195017943795125 "prevalence" 1527 865 -"256" "Collinsella_aerofaciens" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.24292195774629 0.531448232234375 2.43873618295853e-05 0.000153719048435515 4.87741289157536e-05 0.000196585802042121 "prevalence" 1527 698 -"257" "GGB9713_SGB15249" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.14576776961182 0.508873123498971 2.47898090411458e-05 0.000155753333975559 4.95790035476593e-05 0.000199070067476533 "prevalence" 1527 329 -"258" "Clostridium_sp_AM49_4BH" "age" "age" "age" 0.269661775704869 0.0640160969520344 2.52665138390928e-05 0.000158239641158934 5.0532389281464e-05 0.000202129557125856 "prevalence" 1527 344 -"259" "Clostridium_symbiosum" "diagnosis" "CD" "diagnosisCD" 0.63929772299135 0.152046133152909 2.61509673390463e-05 0.000163255559682097 5.23012508049999e-05 0.00020841555037766 "prevalence" 1527 539 -"260" "Veillonella_parvula" "reads" "reads" "reads" -0.96366020013573 0.143110835527975 2.7279579143169e-05 0.000169758909699848 5.45584141108998e-05 0.000216592801883873 "abundance" 1527 547 -"261" "Roseburia_inulinivorans" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.960482282643063 0.229221321672017 2.7871350405798e-05 0.000172890852993426 5.57419239994225e-05 0.00022046244098648 "prevalence" 1527 951 -"262" "Ruminococcus_bicirculans" "diagnosis" "UC" "diagnosisUC" -0.614127710064175 0.146625482994736 2.80915074282641e-05 0.000173705080743127 5.61822257237387e-05 0.000221374740165179 "prevalence" 1527 678 -"263" "Sutterella_wadsworthensis" "age" "age" "age" -0.621316452210877 0.101013296737359 2.85993348057012e-05 0.000176287382367004 2.85993348057012e-05 0.000125837073145085 "abundance" 1527 536 -"264" "Clostridium_fessum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.91086768920497 0.457692315680728 2.97979558241545e-05 0.000182524155737924 5.95950237301376e-05 0.000233082759477872 "prevalence" 1527 926 -"265" "GGB9708_SGB15234" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.39557277460222 0.574366709051084 3.03522653476948e-05 0.000185338520279361 6.07036094353778e-05 0.000235672836631467 "prevalence" 1527 282 -"266" "Phocaeicola_vulgatus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.58995996406001 0.507400877451175 3.09965725167061e-05 0.000188683185973968 3.09965725167061e-05 0.0001347011546405 "abundance" 1527 1288 -"267" "Roseburia_hominis" "antibiotics" "Yes" "antibioticsYes" -0.798529835129373 0.191775140329254 3.12876281331912e-05 0.000189863432833092 6.25742773507081e-05 0.000242045556345596 "prevalence" 1527 876 -"268" "Bacteroides_finegoldii" "reads" "reads" "reads" 0.274308762048149 0.0659125384127351 3.15875601991694e-05 0.000191090070059372 6.31741226243796e-05 0.000243473990844324 "prevalence" 1527 333 -"269" "Prevotella_stercorea" "age" "age" "age" -1.38311788498821 0.332899482658092 3.25627312505182e-05 0.00019638141007257 3.25627312505182e-05 0.000139781480490029 "prevalence" 1527 40 -"270" "Firmicutes_bacterium_AF16_15" "antibiotics" "Yes" "antibioticsYes" -0.864563996191169 0.208618809410834 3.40959779286491e-05 0.00020499551037717 6.81907933215873e-05 0.000260903904882595 "prevalence" 1527 827 -"271" "Coprococcus_comes" "diagnosis" "UC" "diagnosisUC" 1.28769150873368 0.205713155078603 3.83413245239606e-05 0.000229812724293923 7.66811789907549e-05 0.000291278147533227 "abundance" 1527 759 -"272" "Flavonifractor_plautii" "diagnosis" "CD" "diagnosisCD" 0.919038302688689 0.17470068318003 3.93300248304751e-05 0.000235017946540515 3.93300248304751e-05 0.000166797213738882 "abundance" 1527 1224 -"273" "Bacteroides_ovatus" "diagnosis" "UC" "diagnosisUC" 1.26343939852593 0.199316486761413 4.06414653104648e-05 0.000240646737020146 4.06414653104648e-05 0.000169633942165418 "abundance" 1527 1176 -"274" "Barnesiella_intestinihominis" "age" "age" "age" 0.235559171274128 0.0573914158913035 4.05309238762916e-05 0.000240646737020146 8.1060204996793e-05 0.000306808517837324 "prevalence" 1527 431 -"275" "Bacteroides_fragilis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.875061928675612 0.213308825359613 4.09020839331995e-05 0.000241458223581486 7.75269302606102e-08 5.60742728460304e-07 "prevalence" 1527 787 -"276" "GGB1543_SGB2126" "diagnosis" "UC" "diagnosisUC" -7.55293540070802 1.6129620640864 4.11575254186669e-05 0.000242234351409865 4.11575254186669e-05 0.000171111601740599 "abundance" 1527 42 -"277" "Bacteroides_ovatus" "reads" "reads" "reads" -0.00272360430800005 0.0761498783601922 4.16845981150438e-05 0.00024442923591538 8.33674586243675e-05 0.000314226932749588 "abundance" 1527 1176 -"278" "Bacteroides_stercoris" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.45376618741882 0.74409055342062 4.19057287777136e-05 0.00024442923591538 4.19057287777136e-05 0.00017353901799712 "abundance" 1527 826 -"279" "Enterocloster_clostridioformis" "reads" "reads" "reads" 0.271315523735475 0.0662189151217583 4.18085293281883e-05 0.00024442923591538 8.36153107032521e-05 0.000314226932749588 "prevalence" 1527 312 -"280" "Barnesiella_intestinihominis" "diagnosis" "CD" "diagnosisCD" -0.577996506445857 0.141226657514909 4.26403106850411e-05 0.000247973711543364 8.5278803173987e-05 0.00031934190124727 "prevalence" 1527 431 -"281" "Roseburia_faecis" "diagnosis" "UC" "diagnosisUC" -0.619294737187615 0.151633281527912 4.42363505261453e-05 0.000256492073970588 8.84707441975829e-05 0.000328961640396646 "prevalence" 1527 922 -"282" "Parabacteroides_merdae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.55909836411257 0.509891312841185 4.46113354053423e-05 0.000257723921352199 4.46113354053423e-05 0.000182920230378765 "abundance" 1527 826 -"283" "Roseburia_faecis" "reads" "reads" "reads" 0.234408071917477 0.0574294038917092 4.47125943389945e-05 0.000257723921352199 8.94231894618965e-05 0.000331336449374606 "prevalence" 1527 922 -"284" "Ruminococcus_sp_BSD2780120874_150323_B10" "diagnosis" "UC" "diagnosisUC" -1.83207329362301 0.450661767436789 4.79716243777565e-05 0.000275695747159224 4.79716243777565e-05 0.000195017943795125 "prevalence" 1527 90 -"285" "Prevotella_sp_885" "diagnosis" "UC" "diagnosisUC" 2.25155723123537 0.554100076056391 4.83529539382117e-05 0.000277072351892274 9.67035698682687e-05 0.000355815225717393 "prevalence" 1527 69 -"286" "Tyzzerella_nexilis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.49839895680813 0.369183521502233 4.93502092909675e-05 0.000281959967703364 9.86979831387781e-05 0.000361892604842186 "prevalence" 1527 188 -"287" "Proteus_mirabilis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.87411312008869 0.463810010596197 5.32938497939833e-05 0.000302721460748382 0.000106584859353541 0.00038678217002522 "prevalence" 1527 100 -"288" "Clostridiales_bacterium" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.52644993273919 0.379088543043531 5.65815609542735e-05 0.000319538641920955 0.000113159920435507 0.000407839167166879 "prevalence" 1527 985 -"289" "Alistipes_shahii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.21130104237167 0.692918839779758 5.71075056408077e-05 0.000321579440985989 5.71075056408077e-05 0.000224184111363171 "abundance" 1527 673 -"290" "GGB3746_SGB5089" "diagnosis" "CD" "diagnosisCD" -0.547309830582067 0.136072588195752 5.76594668084346e-05 0.0003237545923669 0.000115315609002757 0.000414194840499697 "prevalence" 1527 651 -"291" "GGB3746_SGB5089" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.08966236646763 0.271007971529399 5.80067260253122e-05 0.000324771182388138 0.00011601008727036 0.000415276786974577 "prevalence" 1527 651 -"292" "Prevotella_copri_clade_E" "age" "age" "age" -1.31848453829175 0.328669186890663 6.0312330895609e-05 0.000336715127342914 6.0312330895609e-05 0.000235017791238978 "prevalence" 1527 38 -"293" "Prevotella_sp_885" "diagnosis" "CD" "diagnosisCD" 2.23594292607024 0.558674869074531 6.274939289751e-05 0.000349322831116053 0.000125494848308711 0.000446203905097639 "prevalence" 1527 69 -"294" "Collinsella_aerofaciens" "diagnosis" "UC" "diagnosisUC" 1.35700933959354 0.242264494894585 6.70261348263423e-05 0.000371017188245532 6.70261348263423e-05 0.000257380357733155 "abundance" 1527 698 -"295" "Alistipes_shahii" "reads" "reads" "reads" 0.02038091942929 0.0846406228031982 6.76602943685545e-05 0.000371371391000437 0.000135316010821675 0.000477905376012337 "abundance" 1527 673 -"296" "Ruthenibacterium_lactatiformans" "reads" "reads" "reads" -0.767159720892472 0.101159408352525 6.75901568291115e-05 0.000371371391000437 7.86168089193735e-12 1.22087279733615e-10 "abundance" 1527 797 -"297" "Phascolarctobacterium_faecium" "antibiotics" "Yes" "antibioticsYes" 0.763173431946333 0.192215101766866 7.1748006354011e-05 0.000391607833563512 0.000143490864931606 0.000505087844559253 "prevalence" 1527 503 -"298" "Gemmiger_formicilis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.57453395504445 0.648770533361868 7.24949088799498e-05 0.000393486255420616 0.000144984562248086 0.000508650158584648 "abundance" 1527 472 -"299" "Dysgonomonas_mossii" "diagnosis" "CD" "diagnosisCD" -3.59191309312294 0.908111821021644 7.6418109194266e-05 0.000413631538408853 7.6418109194266e-05 0.000291278147533227 "prevalence" 1527 31 -"300" "Candidatus_Cibionibacter_quicibialis" "diagnosis" "UC" "diagnosisUC" -0.59949930653047 0.152725989814079 8.66123403702387e-05 0.000465331665618694 0.000173217179042973 0.000602200259037667 "prevalence" 1527 933 -"301" "Phocaeicola_plebeius" "age" "age" "age" 0.335360573117613 0.0854394260278001 8.66840973823974e-05 0.000465331665618694 0.000173360680632056 0.000602200259037667 "prevalence" 1527 127 -"302" "Anaerostipes_hadrus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.35193416630772 0.344575227536458 8.72788535254454e-05 0.000467240766544439 0.000174550089452618 0.000604343916268737 "prevalence" 1527 1128 -"303" "Bacteroides_thetaiotaomicron" "age" "age" "age" 0.529335222904813 0.0902290025857688 8.7738086043565e-05 0.000468392069882046 8.7738086043565e-05 0.00032739017265726 "abundance" 1527 1062 -"304" "Phocaeicola_plebeius" "diagnosis" "UC" "diagnosisUC" 1.00837432509574 0.257135263850223 8.79733314466279e-05 0.000468392069882046 9.59090275934489e-06 4.77735533673029e-05 "prevalence" 1527 127 -"305" "Clostridium_sp_1001270H_150608_G6" "diagnosis" "UC" "diagnosisUC" -3.0786495576353 0.753577973027053 9.42805814342362e-05 0.000498802346635065 9.42805814342362e-05 0.000348112916064872 "abundance" 1527 141 -"306" "Bacteroides_ovatus" "reads" "reads" "reads" 0.278268815013144 0.0712939782491789 9.49613474658363e-05 0.000498802346635065 8.33674586243675e-05 0.000314226932749588 "prevalence" 1527 1176 -"307" "Clostridiaceae_bacterium" "diagnosis" "CD" "diagnosisCD" -0.703688168232141 0.180280793120553 9.48939937182424e-05 0.000498802346635065 0.000189778982566441 0.000650670797370655 "prevalence" 1527 1109 -"308" "GGB3746_SGB5089" "diagnosis" "UC" "diagnosisUC" -0.57432164609494 0.147105179590344 9.45545748292052e-05 0.000498802346635065 0.000189100209090789 0.000650455442344864 "prevalence" 1527 651 -"309" "GGB1549_SGB2133" "age" "age" "age" 2.19992972066252 0.500336487491687 0.000101757565140748 0.000533067780924989 0.000101757565140748 0.000371666684460263 "abundance" 1527 46 -"310" "GGB1549_SGB2133" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -6.22034318636588 1.36232730736988 0.00010206755539155 0.000533262040735529 0.00010206755539155 0.000371666684460263 "abundance" 1527 46 -"311" "Phocaeicola_massiliensis" "diagnosis" "UC" "diagnosisUC" -1.63741747046224 0.381341394100811 0.000103386187841448 0.00053871096277917 0.000206761686979059 0.000704323682096407 "abundance" 1527 396 -"312" "Oscillibacter_sp_ER4" "antibiotics" "Yes" "antibioticsYes" -1.55343543712644 0.334529065872323 0.000104179515277858 0.000541400991630145 0.000208348177184312 0.000707445900664417 "abundance" 1527 458 -"313" "Parasutterella_SGB9260" "diagnosis" "UC" "diagnosisUC" 1.70046535937706 0.356669937418981 0.000107818077065502 0.000558598562446212 0.000107818077065502 0.00038991742938757 "abundance" 1527 269 -"314" "Clostridium_sp_AT4" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.05568713888078 0.272679633842417 0.000108154739943281 0.000558598562446212 1.45277288030005e-07 1.00269814483455e-06 "prevalence" 1527 528 -"315" "Escherichia_coli" "antibiotics" "Yes" "antibioticsYes" -0.74623648009757 0.193016573121992 0.000110554141869121 0.00056848103476911 2.14279678642469e-05 9.71155968439688e-05 "prevalence" 1527 707 -"316" "Alistipes_onderdonkii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.0074977261105 0.674924861894761 0.000119481257432774 0.000609572785962508 0.000119481257432774 0.000426257458949356 "abundance" 1527 831 -"317" "Faecalibacterium_prausnitzii" "reads" "reads" "reads" 0.435781055135974 0.113254811239502 0.000119186754737949 0.000609572785962508 0.000238359303993394 0.000799071190530235 "prevalence" 1527 1374 -"318" "GGB16040_SGB9347" "diagnosis" "UC" "diagnosisUC" 1.08150861079991 0.281933608067714 0.000125034029051706 0.000634944706475924 0.000250052424594992 0.000835618229026302 "prevalence" 1527 114 -"319" "Ruminococcus_torques" "diagnosis" "CD" "diagnosisCD" 0.879175300532024 0.184422361583028 0.000127949128556626 0.00064770102901463 4.29752071184412e-05 0.00017727272936357 "abundance" 1527 1093 -"320" "Blautia_obeum" "diagnosis" "CD" "diagnosisCD" 0.954081960812642 0.210400525157315 0.000131697345953863 0.000664952490940176 0.000131697345953863 0.000466685897071407 "abundance" 1527 899 -"321" "Ruminococcus_torques" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.80919196942661 0.213064209524597 0.000145939854821463 0.000734965145157572 0.0002918584112017 0.000966151981909076 "prevalence" 1527 1093 -"322" "Alistipes_shahii" "reads" "reads" "reads" 0.217703108130579 0.0573881754594081 0.000148527529843258 0.000746074018801355 0.000135316010821675 0.000477905376012337 "prevalence" 1527 673 -"323" "Clostridiales_bacterium" "diagnosis" "UC" "diagnosisUC" -0.626308334188965 0.165454125520596 0.000153467924222134 0.000766947120025703 0.000306912296040503 0.00100651982800861 "prevalence" 1527 985 -"324" "Clostridium_symbiosum" "reads" "reads" "reads" 0.215002930186303 0.0567892380152014 0.000153103871360347 0.000766947120025703 0.000306184301925268 0.00100651982800861 "prevalence" 1527 539 -"325" "Sutterella_wadsworthensis" "diagnosis" "UC" "diagnosisUC" -0.573832696282559 0.151630311656529 0.000154067813131725 0.000767980884845387 0.000308111889372408 0.00100732555782434 "prevalence" 1527 536 -"326" "Bacteroides_faecis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -4.57470977039409 1.11056021047305 0.000155144233980664 0.00077115151723577 0.000155144233980664 0.000542491096303249 "abundance" 1527 434 -"327" "Bacteroides_uniformis" "reads" "reads" "reads" -0.0531657129297346 0.0689533903178872 0.000155493192318779 0.00077115151723577 5.31570190629501e-08 4.00955800931967e-07 "abundance" 1527 1244 -"328" "Dysosmobacter_sp_BX15" "reads" "reads" "reads" 0.213598753663736 0.0568950380270745 0.000173854476204087 0.000857857693188854 0.000347678727029278 0.00112277900838813 "prevalence" 1527 621 -"329" "Bacteroides_stercoris" "age" "age" "age" -0.602188840634447 0.118010420355642 0.000181100854057759 0.000891362893775467 0.000181100854057759 0.000624975496356186 "abundance" 1527 826 -"330" "Enterocloster_bolteae" "age" "age" "age" 0.515191789090001 0.0941937509903513 0.000183287526998921 0.00089985886370827 0.000366541459680289 0.00116938906774134 "abundance" 1527 866 -"331" "Lacrimispora_amygdalina" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.86344620751385 0.491089172487097 0.000186938042790352 0.000915481041634958 1.5511419571915e-09 1.56000562551831e-08 "abundance" 1527 865 -"332" "Bacteroides_eggerthii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.55098273020817 0.682965305027004 0.000187598014816817 0.00091641630238015 0.000375160836618471 0.00118722407186406 "prevalence" 1527 409 -"333" "Collinsella_aerofaciens" "reads" "reads" "reads" 0.206642368898549 0.0554144191064418 0.000192213622429706 0.000936621990592631 0.000384390298782764 0.00121169001646149 "prevalence" 1527 698 -"334" "Lachnospira_pectinoschiza" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.11621296516324 0.29958932134225 0.000194688821939961 0.000946323278782796 0.000389339740142534 0.00122363918330511 "prevalence" 1527 500 -"335" "Prevotella_copri_clade_B" "diagnosis" "CD" "diagnosisCD" -5.629346832824 1.32098932064675 0.000202211087677373 0.000980447804768206 0.000202211087677373 0.000691051484101314 "abundance" 1527 40 -"336" "Acidaminococcus_intestini" "antibiotics" "Yes" "antibioticsYes" 0.83569381845436 0.225087835503559 0.00020502313424518 0.000991621792859112 0.000410004234004784 0.00128095997369542 "prevalence" 1527 173 -"337" "Clostridium_sp_AM22_11AC" "diagnosis" "CD" "diagnosisCD" 1.00004547508949 0.235442388288503 0.000208017251185688 0.00100361903411564 0.000415991231194585 0.00129323757979312 "abundance" 1527 730 -"338" "Blautia_obeum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.30704412093158 0.352635651119169 0.000210143047964785 0.0010113781175448 0.000420241935828961 0.00129758913519118 "prevalence" 1527 899 -"339" "Alistipes_putredinis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.97130780086785 0.532160925207857 0.000211937434040193 0.00101750797571139 0.000423829950604438 0.00130485255929529 "prevalence" 1527 873 -"340" "Faecalibacterium_prausnitzii" "age" "age" "age" -0.441632277851957 0.0523573419687508 0.000214990999520159 0.00102963826730978 1.08020119674291e-07 7.65565411919809e-07 "abundance" 1527 1374 -"341" "Dysosmobacter_sp_BX15" "diagnosis" "CD" "diagnosisCD" -0.495317539185249 0.133892128786491 0.00021612886092496 0.00103255695415006 0.000432211010165397 0.00132678728701936 "prevalence" 1527 621 -"342" "Phocaeicola_dorei" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.879431017955434 0.23831875309596 0.000224125291386823 0.00106814833992647 0.000448200350627406 0.00136791783312873 "prevalence" 1527 769 -"343" "Paraprevotella_clara" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -6.59694715036378 1.67374769917256 0.000224811878954956 0.0010688136532311 0.000224811878954956 0.000760901744155235 "abundance" 1527 178 -"344" "Phocaeicola_massiliensis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -4.05602554923916 0.996979381296594 0.000226877036655471 0.00107601390685629 0.000226877036655471 0.000765438181176284 "abundance" 1527 396 -"345" "Fusicatenibacter_saccharivorans" "age" "age" "age" 0.261210342610928 0.0708789590444261 0.000228431952985166 0.00108076522066105 0.000456811724813188 0.0013861873028814 "prevalence" 1527 1119 -"346" "Bacteroides_finegoldii" "reads" "reads" "reads" -1.05552174743493 0.188344026393167 0.000229538287208175 0.00108337636039801 6.31741226243796e-05 0.000243473990844324 "abundance" 1527 333 -"347" "Rikenellaceae_bacterium" "diagnosis" "CD" "diagnosisCD" -1.15443053002052 0.313765458899315 0.000233894668321226 0.00110127754674621 0.000233894668321226 0.000786601177538901 "prevalence" 1527 67 -"348" "Parasutterella_excrementihominis" "reads" "reads" "reads" 0.205366175201832 0.0558698941129598 0.000237111570898311 0.00111336546409325 0.000474166919899569 0.00143062933546841 "prevalence" 1527 699 -"349" "Anaerostipes_hadrus" "reads" "reads" "reads" 0.245014215037553 0.0667667755376046 0.000242832741084782 0.00113515592363556 0.000485606514429422 0.00146097002631758 "prevalence" 1527 1128 -"350" "Ruthenibacterium_lactatiformans" "age" "age" "age" 0.200881743688168 0.0548042418666859 0.000246912229423824 0.00115147135153736 0.00049376349319861 0.00148129047959583 "prevalence" 1527 797 -"351" "Coprococcus_eutactus" "diagnosis" "UC" "diagnosisUC" 2.01815126463105 0.476878532023778 0.000249513684296154 0.00116083271217782 0.000498965111513658 0.00149265483784256 "abundance" 1527 177 -"352" "Bifidobacterium_adolescentis" "age" "age" "age" -0.226717167152245 0.0619788944416467 0.000254217103785606 0.00117990551258212 0.000508369581235354 0.0015164923101258 "prevalence" 1527 427 -"353" "GGB1266_SGB1699" "diagnosis" "UC" "diagnosisUC" 1.17031108928669 0.320598795699041 0.000261840993843542 0.00121241066817602 0.000523613426981026 0.00155756557434356 "prevalence" 1527 84 -"354" "Phocaeicola_sartorii" "diagnosis" "CD" "diagnosisCD" 1.30576761963379 0.335551512114836 0.000262506634050252 0.00121261929771677 0.000262506634050252 0.00087447004907592 "abundance" 1527 424 -"355" "Parabacteroides_merdae" "reads" "reads" "reads" -0.0213661031274695 0.0815817047497241 0.000264778941312938 0.00122023125312613 0.000529487774738112 0.00157061542169507 "abundance" 1527 826 -"356" "Clostridiaceae_bacterium_Marseille_Q4149" "diagnosis" "CD" "diagnosisCD" -0.751019910106174 0.206534495690462 0.000276589873489238 0.00126867749483092 0.000553103245020359 0.00163607010291737 "prevalence" 1527 181 -"357" "Butyrivibrio_crossotus" "diagnosis" "CD" "diagnosisCD" -2.25274876600867 0.619665330095464 0.000277519368780909 0.00126995982809812 0.000277519368780909 0.000921573752932829 "prevalence" 1527 43 -"358" "Haemophilus_parainfluenzae" "antibiotics" "Yes" "antibioticsYes" -0.714091374399114 0.196797979203866 0.000285017178642634 0.00130122328754137 0.000569953122493146 0.00167651949123332 "prevalence" 1527 674 -"359" "Faecalibacterium_prausnitzii" "antibiotics" "Yes" "antibioticsYes" -1.00979070092083 0.278964877272491 0.000294856795054319 0.00134300740684415 0.000589626649579048 0.00172957150543187 "prevalence" 1527 1374 -"360" "Candidatus_Cibionibacter_quicibialis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.37231232464837 0.379275064780359 0.000296600847289139 0.00134780943163483 0.000593113722515665 0.00173498086143086 "prevalence" 1527 933 -"361" "Anaerostipes_hadrus" "diagnosis" "UC" "diagnosisUC" 1.07483222603067 0.181303792468847 0.000303132109205073 0.00137429267143089 0.000606172329334515 0.00176828171209185 "abundance" 1527 1128 -"362" "Prevotella_stercorea" "diagnosis" "UC" "diagnosisUC" 2.74624531629267 0.760707805542669 0.000306057157865497 0.00138434186682681 0.000306057157865497 0.00100651982800861 "prevalence" 1527 40 -"363" "Bacteroides_cellulosilyticus" "age" "age" "age" 0.674522588823628 0.15763586802519 0.000310900539584047 0.0013997687888185 0.000310900539584047 0.001013305462348 "abundance" 1527 433 -"364" "Bacteroides_fragilis" "diagnosis" "UC" "diagnosisUC" 1.41625668161315 0.309045775307731 0.00032598546086593 0.00146095318929364 0.00032598546086593 0.00105920198976745 "abundance" 1527 787 -"365" "Dysosmobacter_welbionis" "diagnosis" "CD" "diagnosisCD" 0.726470217307065 0.148905237438522 0.000331682160438551 0.0014830822459884 0.000331682160438551 0.00107440601663531 "abundance" 1527 1191 -"366" "GGB9480_SGB14874" "age" "age" "age" 0.221875569547985 0.0618341182827936 0.000332919561841973 0.0014852164927836 0.000665728288249288 0.00193134360547046 "prevalence" 1527 332 -"367" "Alistipes_onderdonkii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -3.48716442843928 0.973457515081269 0.000340652590122119 0.00151280718431505 0.000681189136057081 0.00196539816304994 "prevalence" 1527 831 -"368" "Gemmiger_formicilis" "reads" "reads" "reads" 0.215638408537457 0.0603018300757237 0.000348912350471656 0.00154597445084266 0.000697702961115 0.00200755947394398 "prevalence" 1527 472 -"369" "Faecalibacterium_SGB15346" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.38948382908166 0.847724451804234 0.000353660800112565 0.00156346878601799 0.000353660800112565 0.00113861525889899 "abundance" 1527 743 -"370" "Enterocloster_clostridioformis" "diagnosis" "UC" "diagnosisUC" -1.95700464645258 0.521553298374828 0.000360647680674564 0.00159075748992799 0.000360647680674564 0.0011575803975451 "abundance" 1527 312 -"371" "Proteus_mirabilis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 3.55034294781035 0.984777650626205 0.000364411575746848 0.00159654757625413 0.000364411575746848 0.00116611704238991 "abundance" 1527 100 -"372" "Lacrimispora_amygdalina" "diagnosis" "CD" "diagnosisCD" -0.510393258172025 0.143153047016026 0.000363346337378875 0.00159654757625413 0.000726560654196863 0.00208480444870238 "prevalence" 1527 865 -"373" "Parasutterella_excrementihominis" "antibiotics" "Yes" "antibioticsYes" 0.671596441988823 0.188403561594988 0.000364314867193036 0.00159654757625413 0.000728497009063615 0.00208480444870238 "prevalence" 1527 699 -"374" "Clostridiaceae_bacterium_Marseille_Q4149" "age" "age" "age" 0.262253570368607 0.073639385439535 0.000368992091683664 0.00160939854274527 0.000737848028203604 0.00210018198863344 "prevalence" 1527 181 -"375" "Bacteroides_ovatus" "age" "age" "age" -0.47019763675327 0.0763949361847589 0.000372172570214824 0.00161965523875226 0.000372172570214824 0.00118377781369534 "abundance" 1527 1176 -"376" "Prevotella_copri_clade_E" "diagnosis" "UC" "diagnosisUC" 2.70924576724738 0.761724492129047 0.000375504583335791 0.00163052434630697 0.000375504583335791 0.00118722407186406 "prevalence" 1527 38 -"377" "Gemmiger_formicilis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.00807247892344 0.284048217522293 0.00038677280249421 0.00167572961435407 0.000144984562248086 0.000508650158584648 "prevalence" 1527 472 -"378" "Flavonifractor_plautii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.19597875114324 0.302517221198155 0.000390278165699476 0.00168595598730673 1.10492193897814e-05 5.42696543051588e-05 "abundance" 1527 1224 -"379" "Enterocloster_clostridioformis" "diagnosis" "CD" "diagnosisCD" 0.609314932449112 0.171822888983962 0.000390858783137129 0.00168595598730673 0.000781564795685902 0.00221863554904385 "prevalence" 1527 312 -"380" "Dorea_longicatena" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.21863873783979 0.344072650215302 0.000397396924616248 0.00171038235837037 0.000794635924916801 0.00224969312791459 "prevalence" 1527 1020 -"381" "Clostridium_sp_AF20_17LB" "diagnosis" "CD" "diagnosisCD" 1.04201474307876 0.266450371776517 0.000405299122524627 0.00174055930860027 0.000405299122524627 0.00127001742844512 "abundance" 1527 654 -"382" "Veillonella_dispar" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.86436618006826 0.529541840315173 0.000416383311675816 0.00178423901538277 0.000416383311675816 0.00129323757979312 "abundance" 1527 526 -"383" "Enterocloster_clostridioformis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.74305271697137 0.483470288388078 0.000419011050451501 0.00179157022446878 0.000419011050451501 0.00129758260784981 "abundance" 1527 312 -"384" "Coprococcus_eutactus" "diagnosis" "UC" "diagnosisUC" -0.711114895476551 0.201898537356607 0.000428078162690281 0.00182634220501487 0.000498965111513658 0.00149265483784256 "prevalence" 1527 177 -"385" "Bacteroides_xylanisolvens" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.81088491407281 0.690682504778699 0.000435509216188956 0.00185399783972379 0.000435509216188956 0.00133303690520446 "abundance" 1527 959 -"386" "Alistipes_dispar" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 8.42522005007377 2.17411942815472 0.000451293465955072 0.00191701615755698 0.000451293465955072 0.00137338876094685 "abundance" 1527 83 -"387" "Bacteroides_finegoldii" "diagnosis" "CD" "diagnosisCD" -1.84852215380658 0.47598965824883 0.000465042270612392 0.00196686709259008 0.000465042270612392 0.00140711930592174 "abundance" 1527 333 -"388" "Veillonella_parvula" "diagnosis" "CD" "diagnosisCD" -0.48816432744216 0.139865922478958 0.000482603854743473 0.00203673419474891 0.000964974803006334 0.00270295329436257 "prevalence" 1527 547 -"389" "Akkermansia_muciniphila" "antibiotics" "Yes" "antibioticsYes" -0.87065035361757 0.249621714411708 0.000486868226477776 0.00205030283305512 0.000973499412285599 0.00271961740575024 "prevalence" 1527 407 -"390" "Bacteroides_finegoldii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.63840429575321 0.47009056105271 0.000491594691262514 0.00206575489618699 0.00098294771718455 0.00273695200294155 "prevalence" 1527 333 -"391" "Coprococcus_comes" "diagnosis" "CD" "diagnosisCD" 0.822823377664088 0.195055591884174 0.000498573127483581 0.0020905834573024 0.000996897679803714 0.00276305498654258 "abundance" 1527 759 -"392" "Bacteroides_caecigallinarum" "diagnosis" "CD" "diagnosisCD" -2.50658430474213 0.721791681954448 0.000515202199744999 0.00215568543533561 0.00103013896618338 0.00284771400075823 "prevalence" 1527 21 -"393" "Bacteroides_xylanisolvens" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.24846532299045 0.360174744504603 0.00052771989247335 0.00220334331173702 0.00105516129666179 0.00289415669941519 "prevalence" 1527 959 -"394" "Clostridium_sp_AF34_10BH" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.27976035627575 0.370859601150429 0.000558938512843368 0.00232375713637434 0.0011175646134256 0.0030494786350838 "prevalence" 1527 960 -"395" "Bacteroides_intestinalis" "antibiotics" "Yes" "antibioticsYes" 2.41946883382016 0.686244191669798 0.000562491582260627 0.00233356380411309 0.000562491582260627 0.00165919304711515 "abundance" 1527 158 -"396" "Bacteroides_xylanisolvens" "diagnosis" "CD" "diagnosisCD" 0.503283914281414 0.146376084660058 0.000585393218228407 0.00242342870427607 0.00117044375123687 0.00317235770359829 "prevalence" 1527 959 -"397" "Bacteroides_fragilis" "reads" "reads" "reads" 0.187166081151213 0.0544729106864553 0.000590484591293322 0.00243933803675931 0.00118062051053409 0.00318858122538107 "prevalence" 1527 787 -"398" "Bacteroides_fragilis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 2.68764252368257 0.625349070834963 0.000635515979849899 0.00261431205184569 0.000635515979849899 0.00184877375956334 "abundance" 1527 787 -"399" "Roseburia_faecis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.725760070270049 0.212454346546131 0.000635306497482726 0.00261431205184569 0.00127020938061971 0.00342178853554697 "prevalence" 1527 922 -"400" "Bacteroides_faecis" "age" "age" "age" -0.70408959031634 0.173084272662276 0.000669293427544293 0.00274747764164191 0.00133813890139643 0.00358648395907267 "abundance" 1527 434 -"401" "Veillonella_dispar" "reads" "reads" "reads" -0.8474824389438 0.144217762065846 0.000676283219559037 0.00277035096649551 0.00135210908012502 0.00361475237623296 "abundance" 1527 526 -"402" "Haemophilus_parainfluenzae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.44160472941804 0.41144085031653 0.00067911347063454 0.00277572636031592 0.00067911347063454 0.00196477760271253 "abundance" 1527 674 -"403" "Lachnospira_eligens" "diagnosis" "CD" "diagnosisCD" -0.479515379786358 0.141144240322157 0.000680436502861476 0.00277572636031592 0.00136041001188853 0.00362776003170274 "prevalence" 1527 929 -"404" "Veillonella_rogosae" "antibiotics" "Yes" "antibioticsYes" 2.97688990630541 0.866578125099345 0.000684196229726153 0.00278524881851021 0.00136792433497153 0.00363860981795955 "abundance" 1527 207 -"405" "Ruminococcus_lactaris" "reads" "reads" "reads" 0.214902277909235 0.0633174377124765 0.000688681962727769 0.00279768098787954 0.00137688964260975 0.00365325493114547 "prevalence" 1527 379 -"406" "Lacrimispora_celerecrescens" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.21773345326398 0.359289601089566 0.000700761345916478 0.00284084578821742 0.00140103162536903 0.00370799347466088 "prevalence" 1527 756 -"407" "Alistipes_shahii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.42689923442668 0.717213197294878 0.000714925207347089 0.00288628895693432 0.00142933929664208 0.00376404562906243 "prevalence" 1527 673 -"408" "Roseburia_intestinalis" "diagnosis" "CD" "diagnosisCD" -0.456856410980612 0.135009917500843 0.000714710611059719 0.00288628895693432 0.00142891041086188 0.00376404562906243 "prevalence" 1527 842 -"409" "Klebsiella_pneumoniae" "antibiotics" "Yes" "antibioticsYes" 2.28833690779229 0.657051044551174 0.000732769544661172 0.00295223028921223 0.000732769544661172 0.00209136388962756 "abundance" 1527 119 -"410" "Dialister_invisus" "diagnosis" "CD" "diagnosisCD" 0.460286862394229 0.13673452646092 0.000761890045223613 0.00305694691656456 0.00152319961400621 0.00397160195651991 "prevalence" 1527 726 -"411" "Alistipes_communis" "antibiotics" "Yes" "antibioticsYes" -0.82402146602407 0.24495148070921 0.000768162196678543 0.00307579699243826 0.00153573432019668 0.00399442227125048 "prevalence" 1527 407 -"412" "Odoribacter_splanchnicus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.41691931849783 0.718891272074805 0.000773774488551143 0.00309193323237001 0.00154695025014315 0.00401370875712818 "prevalence" 1527 757 -"413" "Dorea_longicatena" "diagnosis" "UC" "diagnosisUC" 1.01084371424559 0.183756807723305 0.000779510740035794 0.00310849793067335 0.00155841384307776 0.00403354171149537 "abundance" 1527 1020 -"414" "Bifidobacterium_longum" "diagnosis" "UC" "diagnosisUC" 0.522993620529097 0.155926373969969 0.000796217921898671 0.00316539033141076 0.00159180188081819 0.00410988456269929 "prevalence" 1527 843 -"415" "Hungatella_hathewayi" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.75123713130778 0.523518263925116 0.000816192607498989 0.0032349702942252 0.000816192607498989 0.00230454383293832 "abundance" 1527 451 -"416" "Phocaeicola_vulgatus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.22415366679984 0.746106637182405 0.000825236499762849 0.00326419457598504 1.60282233732381e-09 1.59677395114523e-08 "abundance" 1527 1288 -"417" "Alistipes_finegoldii" "reads" "reads" "reads" 0.0511156786894734 0.11237319429844 0.000828935177595302 0.00327220068085095 0.00165718322166195 0.00426825727335371 "abundance" 1527 639 -"418" "Bacteroides_caecigallinarum" "diagnosis" "UC" "diagnosisUC" -9.25765879697053 2.1962099671036 0.000843784533191672 0.00332410277793654 0.000843784533191672 0.00237609724546775 "abundance" 1527 21 -"419" "Alistipes_onderdonkii" "diagnosis" "UC" "diagnosisUC" -1.05480190336612 0.264535640247404 0.000846102085366285 0.00332652610624893 1.29707804661965e-12 2.32154985971247e-11 "abundance" 1527 831 -"420" "Alistipes_putredinis" "reads" "reads" "reads" 0.197489217865503 0.0592843730436551 0.000864666111271453 0.00339268590647474 0.00172858457505892 0.00444132679139227 "prevalence" 1527 873 -"421" "Oscillospiraceae_bacterium" "diagnosis" "CD" "diagnosisCD" -3.76189120643333 1.05140533691426 0.000866748620027114 0.00339404169044685 0.000866748620027114 0.00243427272007615 "abundance" 1527 81 -"422" "Bilophila_wadsworthia" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -3.24881407961947 0.9765835074996 0.000878764979712131 0.00343421354071501 0.00175675773153469 0.00450275768082679 "prevalence" 1527 764 -"423" "Phocaeicola_vulgatus" "reads" "reads" "reads" 0.2665951953201 0.0804470105204946 0.00091996850631139 0.00358806080106279 0.00183909067057018 0.00469101388435291 "prevalence" 1527 1288 -"424" "Anaerostipes_hadrus" "diagnosis" "CD" "diagnosisCD" 0.702187513791281 0.16555995296865 0.000953524582677723 0.00371152795727544 0.00190613995622567 0.00483181207131888 "abundance" 1527 1128 -"425" "Phocaeicola_coprocola" "antibiotics" "Yes" "antibioticsYes" -4.65771243634665 1.33641953188971 0.000984888031361542 0.00382598650751581 0.000984888031361542 0.00273695200294155 "abundance" 1527 101 -"426" "Bifidobacterium_adolescentis" "reads" "reads" "reads" 0.202107000531627 0.0614038056271251 0.000996755390769417 0.00386440482849889 0.0019925172602298 0.0050337278153174 "prevalence" 1527 427 -"427" "Akkermansia_sp_KLE1798" "reads" "reads" "reads" 0.412925251012344 0.125964249642892 0.00104502944414029 0.00404353967099034 0.00104502944414029 0.0028813344465069 "prevalence" 1527 70 -"428" "Rikenellaceae_bacterium" "reads" "reads" "reads" 0.385597912720216 0.117697714751368 0.00105224598932845 0.00406341633033161 0.00105224598932845 0.00289367647065324 "prevalence" 1527 67 -"429" "Dysosmobacter_sp_BX15" "diagnosis" "UC" "diagnosisUC" -0.908925291546277 0.21231440651139 0.00106117260879401 0.00408980528122979 0.00106117260879401 0.00290310433908414 "abundance" 1527 621 -"430" "Parabacteroides_merdae" "reads" "reads" "reads" 0.183645161479421 0.0562396458028206 0.00109308070476709 0.00420448759274587 0.000529487774738112 0.00157061542169507 "prevalence" 1527 826 -"431" "Blautia_faecis" "diagnosis" "UC" "diagnosisUC" 0.985099908440974 0.186338217523062 0.00116503646162158 0.00446368871766387 0.00116503646162158 0.00317082088523812 "abundance" 1527 1125 -"432" "Barnesiella_intestinihominis" "diagnosis" "UC" "diagnosisUC" -1.17086640723304 0.317402125223715 0.00117160937916982 0.00448008752817581 0.00117160937916982 0.00317235770359829 "abundance" 1527 431 -"433" "Barnesiella_intestinihominis" "reads" "reads" "reads" 0.197166952927147 0.0608028349271168 0.00118391877945646 0.00451831502941001 0.00236643589523658 0.00593576319565279 "prevalence" 1527 431 -"434" "Lacrimispora_amygdalina" "diagnosis" "UC" "diagnosisUC" 0.986860517188179 0.189448128602327 0.00125687764923321 0.00478740531501305 0.00251217555704128 0.00627153046864207 "abundance" 1527 865 -"435" "Phocaeicola_coprocola" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -5.43951613104222 1.55531397154633 0.00130381502800769 0.00495652639051952 0.00130381502800769 0.00350338083861609 "abundance" 1527 101 -"436" "Gemmiger_formicilis" "diagnosis" "UC" "diagnosisUC" 1.41311680532243 0.359623110823362 0.00134607910625961 0.00510725936627433 3.29090158602225e-18 1.51095307601717e-16 "abundance" 1527 472 -"437" "Ruminococcus_lactaris" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.62828160042399 0.508196573016178 0.00135514154886645 0.00513167943117257 0.00270844668911544 0.00672969342048447 "prevalence" 1527 379 -"438" "Eisenbergiella_massiliensis" "age" "age" "age" -0.645263171903296 0.167569159722009 0.00136106227453936 0.0051427066883951 0.00272027205856354 0.00673855617146329 "abundance" 1527 417 -"439" "Acidaminococcus_intestini" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.19105518746046 0.371936630623385 0.00136331733090515 0.0051427066883951 0.00272477602766555 0.00673855617146329 "prevalence" 1527 173 -"440" "GGB51647_SGB4348" "diagnosis" "CD" "diagnosisCD" -0.757685657429426 0.237166280643177 0.00139954708443747 0.0052692003911191 0.00279713543683338 0.00688525645989755 "prevalence" 1527 123 -"441" "Faecalibacterium_SGB15346" "reads" "reads" "reads" -0.677771574747064 0.0997199563784619 0.00141773800934475 0.00532742321203777 9.04464133558481e-07 5.45779500021575e-06 "abundance" 1527 743 -"442" "Prevotella_copri_clade_A" "diagnosis" "CD" "diagnosisCD" -2.35933982557948 0.693761566251755 0.00145654100494086 0.00546272768455746 0.00145654100494086 0.00382613756521778 "abundance" 1527 289 -"443" "Clostridium_symbiosum" "reads" "reads" "reads" -0.730097916378607 0.1172565472815 0.0014908508440894 0.00558069453898598 0.000306184301925268 0.00100651982800861 "abundance" 1527 539 -"444" "Flavonifractor_plautii" "diagnosis" "UC" "diagnosisUC" 0.973165906990073 0.190163231187916 0.00150522083077509 0.00562371224346945 0.00150522083077509 0.00394420148213026 "abundance" 1527 1224 -"445" "GGB781_SGB1024" "age" "age" "age" 0.597901481558168 0.188585477367524 0.0015220120549902 0.00567559457147109 0.0015220120549902 0.00397160195651991 "prevalence" 1527 18 -"446" "Roseburia_intestinalis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.58985898710281 0.507254289420778 0.00155639391969564 0.00578295304505672 0.00311036547735802 0.00760471334991649 "abundance" 1527 842 -"447" "Dysosmobacter_sp_BX15" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.68584099793922 0.532836955014156 0.00155672123935508 0.00578295304505672 0.00311101909769311 0.00760471334991649 "prevalence" 1527 621 -"448" "Clostridium_fessum" "diagnosis" "CD" "diagnosisCD" 0.67137921819731 0.16779022104 0.00163855759830611 0.00605244148788307 0.00327443032560926 0.00794536465955607 "abundance" 1527 926 -"449" "GGB3278_SGB4328" "age" "age" "age" -0.728869247620569 0.1992961753015 0.00164490287940855 0.00606441552144209 0.00328710005333441 0.00794536465955607 "abundance" 1527 179 -"450" "Parabacteroides_distasonis" "reads" "reads" "reads" 0.21105267102682 0.0671064031422598 0.00166061171568284 0.00611080092739032 1.40529247422004e-05 6.6846344719656e-05 "prevalence" 1527 1140 -"451" "Clostridium_leptum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.35020627711784 0.430179297304256 0.00169695698008208 0.00623280815616613 0.00339103429717191 0.00817564433290761 "prevalence" 1527 652 -"452" "Clostridium_fessum" "antibiotics" "Yes" "antibioticsYes" -0.620302436468447 0.197763036309295 0.00170922390049572 0.0062660853687967 0.00341552635464942 0.00821593583259632 "prevalence" 1527 926 -"453" "Lacrimispora_celerecrescens" "diagnosis" "CD" "diagnosisCD" 0.732287842437289 0.195001671709707 0.00171662266548012 0.00628142451001526 0.00343029853758459 0.00823271649020303 "abundance" 1527 756 -"454" "Phocaeicola_massiliensis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.88184009670347 0.60079533332318 0.00173473161774409 0.00633582351602233 0.00346645394170257 0.00830062440462113 "prevalence" 1527 396 -"455" "Haemophilus_parainfluenzae" "diagnosis" "CD" "diagnosisCD" -0.427382359582138 0.13662395084158 0.00175900972321885 0.00641250932680903 0.00351492533123133 0.00839764966013639 "prevalence" 1527 674 -"456" "Firmicutes_bacterium_AF16_15" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.62860729790535 0.724813113283401 0.00177036891751259 0.00644190105180558 0.00177036891751259 0.0045266575711702 "abundance" 1527 827 -"457" "Bilophila_wadsworthia" "age" "age" "age" 0.175667007624568 0.0562460905257548 0.00178904592586695 0.00649776159692197 0.00357489116640904 0.00852163673076286 "prevalence" 1527 764 -"458" "Faecalibacterium_SGB15315" "diagnosis" "CD" "diagnosisCD" 1.00170787604472 0.300398364348115 0.00179272887625292 0.00649905792986682 1.42418978334276e-07 9.89437112638125e-07 "abundance" 1527 619 -"459" "Waltera_intestinalis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.24088266055823 0.718522170006555 0.00181627160614829 0.00657221244150696 0.00362924436974928 0.00863073459032252 "prevalence" 1527 524 -"460" "Alistipes_dispar" "diagnosis" "UC" "diagnosisUC" -1.11107653635077 0.356330317747212 0.00182015880565515 0.00657410407809643 0.0036370046332325 0.00863073459032252 "prevalence" 1527 83 -"461" "Clostridiales_bacterium" "diagnosis" "UC" "diagnosisUC" 0.970929077647199 0.197344770075583 0.0018443445017774 0.00664916818537459 0.000306912296040503 0.00100651982800861 "abundance" 1527 985 -"462" "GGB9480_SGB14874" "diagnosis" "UC" "diagnosisUC" -0.557245652453744 0.179180439257014 0.00187106835098147 0.00673308942507881 0.0037386358051889 0.00883221344581538 "prevalence" 1527 332 -"463" "Flavonifractor_plautii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.13877289081272 0.366330794961511 0.00187981262555586 0.00675212108517675 0.00375609155560453 0.00885364438106781 "prevalence" 1527 1224 -"464" "Alistipes_SGB2313" "diagnosis" "CD" "diagnosisCD" -2.82919491499376 0.83704449068019 0.00189421173938842 0.00679135731883481 0.00189421173938842 0.00481997011275704 "abundance" 1527 73 -"465" "Acidaminococcus_intestini" "age" "age" "age" 0.628640123994917 0.173940046285072 0.0019080166986174 0.00682832349651721 0.0019080166986174 0.00483181207131888 "abundance" 1527 173 -"466" "Ruminococcus_gnavus" "diagnosis" "UC" "diagnosisUC" 0.454542575943244 0.146644266276263 0.00193764270623465 0.00692167065444698 0.00387153095321227 0.00908519263687146 "prevalence" 1527 767 -"467" "Bifidobacterium_adolescentis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.86768566310464 0.602981728629596 0.00195215265991962 0.00696077791511484 0.0039004944198316 0.00913286498302034 "prevalence" 1527 427 -"468" "GGB3746_SGB5089" "age" "age" "age" 0.169762473431765 0.0549106493136804 0.00199072243622357 0.00708537639413635 0.00397748189662906 0.00928900713003187 "prevalence" 1527 651 -"469" "Akkermansia_muciniphila" "reads" "reads" "reads" 0.192850943047368 0.0623897316454088 0.00199437523878918 0.00708547130289828 0.00398477294498526 0.00928900713003187 "prevalence" 1527 407 -"470" "Alistipes_SGB2313" "age" "age" "age" 1.01314763057845 0.301534940486659 0.00203911772245435 0.00723128136057315 0.00203911772245435 0.00513641051154549 "abundance" 1527 73 -"471" "Eubacterium_siraeum" "diagnosis" "CD" "diagnosisCD" -1.1895434121501 0.322024454920504 0.00204289054436468 0.0072315364559576 0.00204289054436468 0.00513641051154549 "abundance" 1527 565 -"472" "Proteus_mirabilis" "diagnosis" "CD" "diagnosisCD" -0.873786730816911 0.283719019169888 0.00207166861351202 0.00731986294810237 0.00413904541617983 0.00962320605362848 "prevalence" 1527 100 -"473" "Vescimonas_coprocola" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.85343745822895 0.60191506862446 0.00207533473554182 0.00731986294810237 0.00414636245681909 0.00962320605362848 "prevalence" 1527 599 -"474" "Bacteroides_faecis" "antibiotics" "Yes" "antibioticsYes" -0.736943327102936 0.240455022862302 0.00217825374471052 0.00765522988698625 0.00435176270004469 0.0100777662527351 "prevalence" 1527 434 -"475" "Clostridium_sp_AM49_4BH" "antibiotics" "Yes" "antibioticsYes" -1.04578887688662 0.342126127192435 0.00223762069944687 0.00784975017364305 0.00447023445249914 0.0103069161175526 "prevalence" 1527 344 -"476" "Clostridium_sp_AM22_11AC" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.16305274325259 0.381293971386422 0.00228629372051273 0.00800612532236893 0.00456736030204899 0.0104623264185764 "prevalence" 1527 730 -"477" "Veillonella_rogosae" "reads" "reads" "reads" -0.987038692209321 0.206638684509606 0.00232261508455278 0.00811876542972475 0.00463983562827457 0.0106053385789133 "abundance" 1527 207 -"478" "Prevotella_copri_clade_B" "antibiotics" "Yes" "antibioticsYes" -8.33580594491399 2.51293171858804 0.00244417061563196 0.00852840961240151 0.00244417061563196 0.00611621841257665 "abundance" 1527 40 -"479" "Proteus_mirabilis" "age" "age" "age" -0.382273989701253 0.126302070097045 0.00247268250749862 0.00859719149404325 0.00493925085621435 0.0111449762909452 "prevalence" 1527 100 -"480" "Bacteroides_eggerthii" "diagnosis" "UC" "diagnosisUC" -0.467010999839612 0.154957566489991 0.00257998448995004 0.00895433338075023 0.00515331265993169 0.0115785067423146 "prevalence" 1527 409 -"481" "Coprococcus_comes" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.41985253033313 0.683615033007543 0.00260253861603033 0.00901659655270081 3.01317475555352e-13 6.00360856955569e-12 "abundance" 1527 759 -"482" "Bifidobacterium_longum" "reads" "reads" "reads" 0.171390884254706 0.0569545671530483 0.0026188817249767 0.00905715909841498 0.00523090490846398 0.0117030414901228 "prevalence" 1527 843 -"483" "Firmicutes_bacterium_AF16_15" "age" "age" "age" -0.434884190155522 0.094790576811539 0.00265955484226366 0.00918157272399856 0.00265955484226366 0.00662379696563778 "abundance" 1527 827 -"484" "Bacteroides_eggerthii" "diagnosis" "CD" "diagnosisCD" -1.86089622213395 0.572640486126323 0.00278807611162935 0.00960829051520942 0.00278807611162935 0.00687899152775838 "abundance" 1527 409 -"485" "Waltera_intestinalis" "reads" "reads" "reads" 0.175197377698146 0.0586067627736804 0.00279552142081576 0.0096169874230176 0.00558322790161728 0.0124123971875955 "prevalence" 1527 524 -"486" "Bifidobacterium_longum" "reads" "reads" "reads" -0.645258471842442 0.0958688075993317 0.00280133492296541 0.00962004998150162 0.00523090490846398 0.0117030414901228 "abundance" 1527 843 -"487" "Lacrimispora_celerecrescens" "diagnosis" "CD" "diagnosisCD" -0.402784182290975 0.13507736159666 0.00286486349855442 0.00982095311609708 0.00343029853758459 0.00823271649020303 "prevalence" 1527 756 -"488" "Phascolarctobacterium_faecium" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.8048831732242 0.606113506383881 0.00290327905117981 0.00993521412610394 0.0057981290731106 0.0128630762630353 "prevalence" 1527 503 -"489" "Ruminococcus_torques" "diagnosis" "UC" "diagnosisUC" -0.519431997059409 0.174759627772519 0.00295611016977075 0.0100806968093055 0.00590348175220569 0.0130420015278854 "prevalence" 1527 1093 -"490" "Bacteroides_salyersiae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -4.06797161612191 1.25041508147328 0.0030264453727864 0.010302568394468 0.0030264453727864 0.00743238677595916 "abundance" 1527 150 -"491" "Roseburia_intestinalis" "antibiotics" "Yes" "antibioticsYes" -1.52209996077066 0.456273166996647 0.00311982917327258 0.0106019933992602 0.00311982917327258 0.00760863650571789 "abundance" 1527 842 -"492" "Bacteroides_eggerthii" "reads" "reads" "reads" -1.01722813006797 0.225197961726242 0.00313744497598156 0.0106433463247708 2.7885861677675e-16 8.92347573685599e-15 "abundance" 1527 409 -"493" "GGB3746_SGB5089" "age" "age" "age" -0.445833167043828 0.104067181751869 0.00320317319568852 0.010847487737219 0.00397748189662906 0.00928900713003187 "abundance" 1527 651 -"494" "Prevotella_marseillensis" "antibiotics" "Yes" "antibioticsYes" 1.6015386782121 0.543487698911721 0.00321101570158716 0.01085523301194 0.00321101570158716 0.00781297829694941 "prevalence" 1527 18 -"495" "Waltera_intestinalis" "antibiotics" "Yes" "antibioticsYes" -0.671983288414042 0.22835674104145 0.0032537318017148 0.0109806423843708 0.00649687683279211 0.0143229685499551 "prevalence" 1527 524 -"496" "Phocaeicola_coprocola" "age" "age" "age" 0.288221614285034 0.0979814211831849 0.00326527146364335 0.0110005869654467 0.00651988092955542 0.0143437380450219 "prevalence" 1527 101 -"497" "Faecalibacterium_SGB15315" "antibiotics" "Yes" "antibioticsYes" -1.88060140891517 0.588204894913948 0.00328799654945644 0.0110580813384473 0.00328799654945644 0.00794536465955607 "abundance" 1527 619 -"498" "Alistipes_finegoldii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.8611804707438 0.974375008781884 0.00332017628228933 0.0111471210577205 0.00662932899403318 0.0145542025315988 "prevalence" 1527 639 -"499" "Eisenbergiella_massiliensis" "reads" "reads" "reads" 0.172819080445969 0.0590642027298423 0.00343402826865653 0.0114898822550597 0.00685626398716313 0.0149900926924312 "prevalence" 1527 417 -"500" "Bifidobacterium_adolescentis" "diagnosis" "UC" "diagnosisUC" 1.19782146941379 0.32153296514993 0.00351303613788012 0.0117341412195175 0.00701373085285419 0.0153026854971364 "abundance" 1527 427 -"501" "Phocaeicola_sartorii" "antibiotics" "Yes" "antibioticsYes" 0.614659786097973 0.21069723951535 0.0035311506716262 0.0117644553816121 0.00704983231818668 0.0153307488421677 "prevalence" 1527 424 -"502" "Ruminococcus_lactaris" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.84343253837617 0.974779618411158 0.00353415317758767 0.0117644553816121 0.00705581611649268 0.0153307488421677 "prevalence" 1527 379 -"503" "Firmicutes_bacterium_AF16_15" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.26284043258983 0.433018444847858 0.00354134379949461 0.0117683431704294 0.00707014648308301 0.0153307488421677 "prevalence" 1527 827 -"504" "Oscillibacter_sp_ER4" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.89092967014982 0.877880234335608 0.00370763344431835 0.0123000267405739 0.00370763344431835 0.00877861192197349 "abundance" 1527 458 -"505" "Clostridium_fessum" "diagnosis" "CD" "diagnosisCD" -0.443311216319633 0.152888199671493 0.00373665703654525 0.012375301439677 0.00327443032560926 0.00794536465955607 "prevalence" 1527 926 -"506" "Roseburia_intestinalis" "age" "age" "age" -0.445685506201694 0.108212834744494 0.00380356498687906 0.0125755769616949 0.00759266286714871 0.0163964253327383 "abundance" 1527 842 -"507" "Clostridiaceae_bacterium" "antibiotics" "Yes" "antibioticsYes" -0.567509737215762 0.196193078268079 0.00382057373829299 0.0126104748051089 0.00762655069289624 0.0164359949626499 "prevalence" 1527 1109 -"508" "Bacteroides_finegoldii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -9.30169738278743 3.32408739057974 0.0038273465136327 0.012611526286068 0.0038273465136327 0.00900150984052591 "abundance" 1527 333 -"509" "Ruminococcus_torques" "antibiotics" "Yes" "antibioticsYes" 0.618877142149406 0.214105642417747 0.00384602196727594 0.0126517288283791 0.00767725204957911 0.0165004173429209 "prevalence" 1527 1093 -"510" "Clostridium_sp_AM49_4BH" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.97080761732361 0.684432236225309 0.00398333994923592 0.0130814222870706 0.00795081290132067 0.0170305444701716 "prevalence" 1527 344 -"511" "GGB3278_SGB4328" "antibiotics" "Yes" "antibioticsYes" -1.6148762487013 0.563550917171542 0.00416302050993476 0.0136256986204565 0.00830871028010338 0.0177611296675894 "prevalence" 1527 179 -"512" "Lacrimispora_amygdalina" "antibiotics" "Yes" "antibioticsYes" -0.55428480878037 0.194035093296158 0.00428176166272778 0.0139909068377426 0.00854518984251916 0.0181929848260085 "prevalence" 1527 865 -"513" "Eubacterium_ventriosum" "reads" "reads" "reads" 0.164626087452278 0.0576668238933745 0.00430666691861234 0.0140277527347925 0.00859478645727681 0.0182281677363277 "prevalence" 1527 520 -"514" "GGB16040_SGB9347" "reads" "reads" "reads" 0.287985682267943 0.100880319915939 0.00430739592675308 0.0140277527347925 0.00859623819383635 0.0182281677363277 "prevalence" 1527 114 -"515" "Sutterella_wadsworthensis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.687261158485273 0.240897196267636 0.0043319112876119 0.0140841175640493 4.17520462211948e-09 3.83392702692015e-08 "prevalence" 1527 536 -"516" "Alistipes_dispar" "age" "age" "age" 0.834318195672868 0.268843862960625 0.00441702562422153 0.0143132140459848 0.00441702562422153 0.0102065187290546 "abundance" 1527 83 -"517" "Ruminococcus_gnavus" "age" "age" "age" -0.455783027072586 0.11729792613662 0.00449355217962244 0.0145370876804342 0.00449355217962244 0.0103381069753405 "abundance" 1527 767 -"518" "Veillonella_dispar" "diagnosis" "CD" "diagnosisCD" -1.14883126291918 0.342442979834846 0.00450797676874748 0.0145596472828638 0.00450797676874748 0.0103487466691246 "abundance" 1527 526 -"519" "Blautia_wexlerae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.955682162364022 0.323520811882202 0.00452463751345822 0.0145893427414148 2.21309154186332e-12 3.89504111367943e-11 "abundance" 1527 1302 -"520" "Roseburia_hominis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.43815500134048 0.523543996024055 0.004580115297939 0.0147438966922122 1.38266063927039e-07 9.66946778191744e-07 "abundance" 1527 876 -"521" "Eubacterium_rectale" "age" "age" "age" -0.357023266880052 0.0650222142979865 0.00466826124225916 0.0150029316897605 0.00931472982149235 0.0195165767688411 "abundance" 1527 1211 -"522" "Roseburia_faecis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.05188751110975 0.372290417256363 0.00472144335884874 0.0151489332072093 0.00942059469030667 0.0196603715275965 "prevalence" 1527 922 -"523" "Veillonella_rogosae" "antibiotics" "Yes" "antibioticsYes" -0.965144576738809 0.341721633351636 0.00473752852010912 0.015175624144743 0.00136792433497153 0.00363860981795955 "prevalence" 1527 207 -"524" "Prevotella_sp_885" "antibiotics" "Yes" "antibioticsYes" -4.3909764884284 1.46382111242141 0.0047738299990927 0.0152419343435084 0.0047738299990927 0.010888044231192 "abundance" 1527 69 -"525" "Proteus_mirabilis" "antibiotics" "Yes" "antibioticsYes" 2.78438021113624 0.972399460133818 0.00476962629862476 0.0152419343435084 0.009516503262221 0.0198213559071112 "abundance" 1527 100 -"526" "Clostridium_leptum" "diagnosis" "CD" "diagnosisCD" -0.889688584395612 0.239817803814506 0.00478701791284752 0.0152591076699903 0.00478701791284752 0.0108945924913082 "abundance" 1527 652 -"527" "Alistipes_finegoldii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.73426733432674 0.849757772766326 0.00486735339586319 0.0154899161816233 0.00486735339586319 0.0110536025506054 "abundance" 1527 639 -"528" "Coprococcus_eutactus" "antibiotics" "Yes" "antibioticsYes" -2.98227908026923 1.0057404733134 0.00488425262321102 0.0154932299119388 0.00488425262321102 0.0110681776182636 "abundance" 1527 177 -"529" "GGB9453_SGB14844" "reads" "reads" "reads" -0.92770714868441 0.203627536170018 0.00487719627331196 0.0154932299119388 0.0097306055031355 0.020187660925955 "abundance" 1527 222 -"530" "Ruminococcus_gnavus" "reads" "reads" "reads" 0.153023127407352 0.0543923293530308 0.00490325505380727 0.0155282988251854 0.00978246819749185 0.0202554635618655 "prevalence" 1527 767 -"531" "Lachnospira_pectinoschiza" "antibiotics" "Yes" "antibioticsYes" -1.57181877729046 0.500974877159645 0.00493090673501873 0.0155906015537647 0.00493090673501873 0.0111449762909452 "abundance" 1527 500 -"532" "Barnesiella_intestinihominis" "reads" "reads" "reads" 0.0409434918353003 0.1317338621782 0.00496644969383675 0.0156776134115622 0.00236643589523658 0.00593576319565279 "abundance" 1527 431 -"533" "GGB3175_SGB4191" "age" "age" "age" 0.227245221355714 0.0809383300502997 0.00499068849610698 0.0157287182603114 0.00995647002054879 0.0205352194173819 "prevalence" 1527 154 -"534" "Odoribacter_splanchnicus" "diagnosis" "UC" "diagnosisUC" -0.719567470398793 0.187054621299802 0.00500946433097615 0.0157556331387957 1.61414468324928e-13 3.47864650104334e-12 "abundance" 1527 757 -"535" "Eubacterium_siraeum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.69078137792535 0.602549441577457 0.00501535507284079 0.0157556331387957 0.0100055563591749 0.0205704042775959 "prevalence" 1527 565 -"536" "Escherichia_coli" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.984062434122636 0.350979737708979 0.00505107184072416 0.0158423665758828 0.0100766303547082 0.0206287496292087 "prevalence" 1527 707 -"537" "Akkermansia_sp_KLE1798" "age" "age" "age" -0.396750610153537 0.141669785175242 0.00510186237066213 0.0159760241542849 0.00510186237066213 0.0114873489625143 "prevalence" 1527 70 -"538" "Paraprevotella_clara" "reads" "reads" "reads" 0.223480796371935 0.0798630353384225 0.00513722447347099 0.0160610185938597 0.0102480578716512 0.0208917936534047 "prevalence" 1527 178 -"539" "Alistipes_communis" "diagnosis" "UC" "diagnosisUC" -1.04396936930085 0.336672807497889 0.00519659045250531 0.0162206673229958 0.00519659045250531 0.0116509543903304 "abundance" 1527 407 -"540" "Bacteroides_faecis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 5.21315256779639 1.69841158582695 0.00523275431820325 0.0163074991033001 0.0104381269186518 0.0212382697998002 "abundance" 1527 434 -"541" "Lachnospira_eligens" "age" "age" "age" 0.365292455175661 0.0855309593908931 0.00526017003177948 0.0163668347804094 0.00526017003177948 0.0117436354197867 "abundance" 1527 929 -"542" "Paraprevotella_clara" "age" "age" "age" -0.888549500662772 0.292987793147534 0.0052955936479363 0.0164247460128056 0.0052955936479363 0.0117977782536302 "abundance" 1527 178 -"543" "Clostridiales_bacterium" "diagnosis" "CD" "diagnosisCD" -0.433428098313165 0.155407090721612 0.00528734577488256 0.0164247460128056 0.010546735524422 0.0214179859880569 "prevalence" 1527 985 -"544" "GGB3278_SGB4328" "reads" "reads" "reads" 0.229378859347618 0.082302587625905 0.00531953921090512 0.0164728678575414 0.0106107809243939 0.0215066883995393 "prevalence" 1527 179 -"545" "Dialister_invisus" "reads" "reads" "reads" 0.153440623898114 0.055071411926408 0.00533279967288228 0.0164878015202721 0.0106371605934135 0.0215188536142617 "prevalence" 1527 726 -"546" "Bacteroides_thetaiotaomicron" "antibiotics" "Yes" "antibioticsYes" 0.990784258691301 0.33881738872896 0.00535148566475918 0.0165194360014841 0.0106743329306982 0.0215527640053869 "abundance" 1527 1062 -"547" "Anaerostipes_hadrus" "age" "age" "age" -0.359174703358718 0.0705624078577755 0.00553373587309336 0.017055078700354 1.1520707008429e-08 9.65544968325479e-08 "abundance" 1527 1128 -"548" "GGB9480_SGB14874" "age" "age" "age" -0.448215704513962 0.117424035279522 0.00555195725918312 0.0170842905266832 0.000665728288249288 0.00193134360547046 "abundance" 1527 332 -"549" "GGB3304_SGB4367" "diagnosis" "CD" "diagnosisCD" -0.606766374100676 0.219133532957709 0.00562399603427364 0.0172527219787818 0.0112163627371538 0.0225180210084304 "prevalence" 1527 155 -"550" "Lachnospira_sp_NSJ_43" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.89597990285614 0.687885382416774 0.00584693763882703 0.01790739207879 0.0116596885979017 0.0233636264883951 "prevalence" 1527 296 -"551" "Bacteroides_ovatus" "diagnosis" "CD" "diagnosisCD" 0.622633245142379 0.189791800469474 0.00585817453534832 0.0179137293303139 0.00585817453534832 0.0129690404807711 "abundance" 1527 1176 -"552" "Bacteroides_faecis" "reads" "reads" "reads" -0.840620193771603 0.177232853884928 0.00591687866549928 0.0180649701756025 1.49150348267135e-19 9.84392298563089e-18 "abundance" 1527 434 -"553" "Bacteroides_fragilis" "age" "age" "age" -0.146790055791703 0.0534540263281226 0.0060308535887731 0.0183842245124222 0.012025335982537 0.0239599147123756 "prevalence" 1527 787 -"554" "Clostridium_leptum" "age" "age" "age" -0.403267452430045 0.0974686083894383 0.00604240436240966 0.0183907447416643 0.0120482980743405 0.0239604571873889 "abundance" 1527 652 -"555" "Eisenbergiella_massiliensis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.4656261897321 0.946550413874363 0.00648989609768913 0.0196913928181437 1.89340354917707e-06 1.07496459566182e-05 "abundance" 1527 417 -"556" "GGB9453_SGB14844" "diagnosis" "UC" "diagnosisUC" -1.28555218969861 0.449884881617189 0.00665071494091762 0.0201340330958157 0.0132571978726099 0.0261674784177123 "abundance" 1527 222 -"557" "Prevotella_marseillensis" "diagnosis" "UC" "diagnosisUC" 2.13061285892261 0.785171675003674 0.00665638965194315 0.0201340330958157 0.00665638965194315 0.0145832935113111 "prevalence" 1527 18 -"558" "Clostridium_sp_AT4" "age" "age" "age" 0.406722708422521 0.113266845672961 0.0067801043022917 0.0204765437506615 0.0135142387902334 0.0265754863361015 "abundance" 1527 528 -"559" "Lacrimispora_amygdalina" "diagnosis" "CD" "diagnosisCD" 0.591059076649453 0.181006519437755 0.00697373412243429 0.0210288217210442 0.000726560654196863 0.00208480444870238 "abundance" 1527 865 -"560" "Tyzzerella_nexilis" "antibiotics" "Yes" "antibioticsYes" -0.917649573320954 0.340848340987998 0.00709713308538971 0.0213679476869823 0.0141438968727477 0.0277619983227167 "prevalence" 1527 188 -"561" "Blautia_wexlerae" "diagnosis" "CD" "diagnosisCD" 0.555055091290532 0.164425254186793 0.00712445399043626 0.0214172047650961 0.0141981501362107 0.0278167839403311 "abundance" 1527 1302 -"562" "GGB9713_SGB15249" "reads" "reads" "reads" 0.128665210725218 0.171157721984502 0.00717757012789622 0.0215437358370341 0.0143036227428516 0.0279715289193542 "abundance" 1527 329 -"563" "Eubacterium_ventriosum" "diagnosis" "UC" "diagnosisUC" -0.389741566908885 0.145161229035434 0.00725542269561765 0.0217440121890136 0.0144582042327432 0.0282215594635431 "prevalence" 1527 520 -"564" "Dysosmobacter_sp_BX15" "reads" "reads" "reads" -0.082865223426728 0.090652206580022 0.00733191856384796 0.0219396154268896 0.000347678727029278 0.00112277900838813 "abundance" 1527 621 -"565" "Eubacterium_siraeum" "reads" "reads" "reads" -0.754616951153923 0.149890647635663 0.00736880584542332 0.0220162792384666 0.0146833123912591 0.0286080772789107 "abundance" 1527 565 -"566" "Eubacterium_siraeum" "diagnosis" "UC" "diagnosisUC" -1.07969264286485 0.374786597152551 0.00753779297446111 0.0224867900337359 0.00753779297446111 0.0163112897152273 "abundance" 1527 565 -"567" "Ruminococcus_gnavus" "antibiotics" "Yes" "antibioticsYes" 0.491026118034568 0.18402909039978 0.0076259219327225 0.0226804436172599 0.015193689180121 0.0294395151820327 "prevalence" 1527 767 -"568" "Parabacteroides_merdae" "age" "age" "age" -0.358177193709979 0.0783473360633534 0.00768769444386086 0.0227947722963644 0.00768769444386086 0.0165004173429209 "abundance" 1527 826 -"569" "Bacteroides_caccae" "age" "age" "age" 0.154435030004957 0.0579927763895037 0.00774463565486071 0.0228351963755466 0.0154292919282949 0.0297455042124643 "prevalence" 1527 958 -"570" "Eubacterium_siraeum" "reads" "reads" "reads" 0.154387725746803 0.0579703753180286 0.0077397338707715 0.0228351963755466 0.0146833123912591 0.0286080772789107 "prevalence" 1527 565 -"571" "Proteus_mirabilis" "diagnosis" "UC" "diagnosisUC" -0.863168204247526 0.324151378480735 0.00774807328402629 0.0228351963755466 0.0154361139284379 0.0297455042124643 "prevalence" 1527 100 -"572" "Roseburia_hominis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.997990612709832 0.374634967387024 0.00772401997093614 0.0228351963755466 0.0153883794573609 0.0297455042124643 "prevalence" 1527 876 -"573" "Parabacteroides_merdae" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.28153209410581 0.976221128024451 0.00778163034507651 0.0228995567684932 4.88339250491291e-07 3.05139792022961e-06 "abundance" 1527 826 -"574" "Dialister_invisus" "diagnosis" "UC" "diagnosisUC" -0.787776291046636 0.24492615430198 0.00782666435893065 0.0229974468531586 0.0155920720428739 0.0299913079731783 "abundance" 1527 726 -"575" "Eisenbergiella_massiliensis" "diagnosis" "UC" "diagnosisUC" 0.440388680687662 0.166114560913997 0.00802266965063258 0.0235379827287328 0.015980976072942 0.0306277871742772 "prevalence" 1527 417 -"576" "Blautia_faecis" "reads" "reads" "reads" -0.558174563011915 0.0751095110122617 0.00829978178009438 0.0243145031458837 1.72780622036332e-13 3.57757523275228e-12 "abundance" 1527 1125 -"577" "Odoribacter_splanchnicus" "reads" "reads" "reads" -0.135054932923525 0.07130973611934 0.00832563639937778 0.0243537328209344 0.0165819565773009 0.0316074840173823 "abundance" 1527 757 -"578" "GGB33469_SGB15236" "diagnosis" "CD" "diagnosisCD" 0.936229582054257 0.341165456480258 0.00834911518424009 0.0243859059342379 1.27654548573381e-05 6.1836331786005e-05 "abundance" 1527 293 -"579" "GGB3277_SGB4327" "diagnosis" "UC" "diagnosisUC" 1.54624824068937 0.510053382852433 0.00836404579385697 0.0243930529570097 0.00836404579385697 0.0178432976935615 "abundance" 1527 152 -"580" "Clostridium_leptum" "diagnosis" "UC" "diagnosisUC" -0.383243883006397 0.145502474076442 0.0084401944652108 0.0245784500521936 0.016809152047811 0.0319252959756986 "prevalence" 1527 652 -"581" "Bacteroides_fragilis" "antibiotics" "Yes" "antibioticsYes" -1.23573678073388 0.407228414286501 0.00876642029993047 0.0254904542649764 0.00876642029993047 0.018551783239933 "abundance" 1527 787 -"582" "Alistipes_SGB2313" "diagnosis" "UC" "diagnosisUC" -2.19886839943337 0.816680157395976 0.00888937934731837 0.025809579858336 0.00888937934731837 0.0187743691815364 "abundance" 1527 73 -"583" "Coprococcus_eutactus" "reads" "reads" "reads" 0.246493845711127 0.220026846928141 0.00892090048427319 0.0258243548833627 0.0177622185030961 0.033554387726779 "abundance" 1527 177 -"584" "GGB1549_SGB2133" "diagnosis" "UC" "diagnosisUC" -1.14735985803583 0.438732533918902 0.00891832348450965 0.0258243548833627 0.0177571104752449 0.033554387726779 "prevalence" 1527 46 -"585" "GGB1543_SGB2126" "diagnosis" "CD" "diagnosisCD" -5.68366523570735 2.02560606021592 0.00905833860173111 0.0261447468652623 0.00905833860173111 0.0190930250767027 "abundance" 1527 42 -"586" "Clostridium_symbiosum" "age" "age" "age" -0.478426647001407 0.146005555000121 0.00925199434061286 0.026656871063923 0.00925199434061286 0.0194468972426834 "abundance" 1527 539 -"587" "Parabacteroides_distasonis" "diagnosis" "CD" "diagnosisCD" 0.506206250440433 0.14794574719493 0.00926305806161909 0.026656871063923 0.00926305806161909 0.0194468972426834 "abundance" 1527 1140 -"588" "Lacrimispora_celerecrescens" "antibiotics" "Yes" "antibioticsYes" 0.808904511496462 0.289928190201303 0.00936265305073425 0.0269038589134334 0.00936265305073425 0.0195781418249017 "abundance" 1527 756 -"589" "GGB9480_SGB14874" "reads" "reads" "reads" 0.169695355536771 0.0653844397221476 0.00944952702277143 0.027113620855353 0.0188097604845888 0.0352182749498683 "prevalence" 1527 332 -"590" "Bacteroides_salyersiae" "antibiotics" "Yes" "antibioticsYes" 1.51026037448309 0.576591329441217 0.00962891628652185 0.0275878334660758 0.00962891628652185 0.0200160149578092 "abundance" 1527 150 -"591" "Bacteroides_intestinalis" "diagnosis" "CD" "diagnosisCD" 0.575472579034106 0.222643777180029 0.00974571480986375 0.0278408285650201 0.0193964506625723 0.0361246065250024 "prevalence" 1527 158 -"592" "GGB16040_SGB9347" "diagnosis" "CD" "diagnosisCD" 0.753920612259037 0.291818856560675 0.00977970583561952 0.0278971462814606 0.0194637690250078 0.0361861621310004 "prevalence" 1527 114 -"593" "Bacteroides_uniformis" "diagnosis" "UC" "diagnosisUC" 0.514911791845527 0.199361917170586 0.00980023557670936 0.0279149567301605 0.0195044265360597 0.0361980218314219 "prevalence" 1527 1244 -"594" "Faecalibacterium_SGB15315" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.11567441398719 0.432433085251377 0.00988022642509031 0.0281018376049876 0.0196628339759696 0.0364218448180468 "prevalence" 1527 619 -"595" "Bifidobacterium_longum" "antibiotics" "Yes" "antibioticsYes" -0.480849283267352 0.186569447156664 0.00995695463282648 0.0281969410906419 0.0198147683200928 0.0365415454119997 "prevalence" 1527 843 -"596" "Eubacterium_rectale" "age" "age" "age" 0.199111882311572 0.0772532467644868 0.00995490513716927 0.0281969410906419 0.00931472982149235 0.0195165767688411 "prevalence" 1527 1211 -"597" "GGB1680_SGB2312" "diagnosis" "UC" "diagnosisUC" -2.92657281370659 1.13507598237134 0.00992861344566472 0.0281969410906419 0.00992861344566472 0.0205178391362465 "prevalence" 1527 12 -"598" "Haemophilus_parainfluenzae" "reads" "reads" "reads" -0.630293503374665 0.106966140487165 0.0099810832971613 0.0282243657925516 0.0198625445705377 0.0365415454119997 "abundance" 1527 674 -"599" "Klebsiella_pneumoniae" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 4.26812268613407 1.45672048325317 0.0100124884457238 0.0282314609277695 0.0100124884457238 0.0205704042775959 "abundance" 1527 119 -"600" "Blautia_faecis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.908018015290119 0.352545959352745 0.0100065805737081 0.0282314609277695 0.0199130294926381 0.0365707115551753 "prevalence" 1527 1125 -"601" "Lacrimispora_celerecrescens" "age" "age" "age" -0.359736527243803 0.0867194349099075 0.0100799572051815 0.0283807440618511 0.0100799572051815 0.0206287496292087 "abundance" 1527 756 -"602" "Coprococcus_comes" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.43310566808888 1.07425764015354 0.0101179868474477 0.0284468292085076 0.0101179868474477 0.0206665263267017 "abundance" 1527 759 -"603" "Hungatella_hathewayi" "reads" "reads" "reads" -0.750647428355976 0.155799498264643 0.0105138171139147 0.0295172394261342 0.0209170938775247 0.0382815444274975 "abundance" 1527 451 -"604" "Sutterella_wadsworthensis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.359725223831 0.532898567428538 0.0107240381485718 0.0300211612354001 0.0213330713029316 0.0389079849670047 "prevalence" 1527 536 -"605" "Barnesiella_intestinihominis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.96261345759487 1.04220726759776 0.0110369005313418 0.0308527949044947 0.0110369005313418 0.022242303360872 "abundance" 1527 431 -"606" "GGB781_SGB1024" "diagnosis" "CD" "diagnosisCD" 1.98618635940123 0.781991279685848 0.0110881448490098 0.0309517643356645 0.0110881448490098 0.0223030113534369 "prevalence" 1527 18 -"607" "Roseburia_inulinivorans" "age" "age" "age" -0.146133964033573 0.0575735679357761 0.011142022890789 0.0310577927654803 0.0221599011074791 0.040207655617694 "prevalence" 1527 951 -"608" "Alistipes_finegoldii" "reads" "reads" "reads" 0.143788475554511 0.0566705327076069 0.0111720566521169 0.031097149142787 0.00165718322166195 0.00426825727335371 "prevalence" 1527 639 -"609" "Alistipes_finegoldii" "diagnosis" "UC" "diagnosisUC" -0.820754227831113 0.281742024193184 0.0112536455461383 0.0312796918878438 2.47743100182888e-10 2.94679029298832e-09 "abundance" 1527 639 -"610" "Roseburia_intestinalis" "reads" "reads" "reads" 0.138116797081409 0.0545985163834729 0.0114166465232082 0.0316876808328819 0.0227029532285806 0.0411223303762969 "prevalence" 1527 842 -"611" "GGB51647_SGB4348" "age" "age" "age" -0.914358435046687 0.337084239313036 0.0117699386649155 0.0326219292925459 0.0117699386649155 0.023539877329831 "abundance" 1527 123 -"612" "Phocaeicola_dorei" "diagnosis" "UC" "diagnosisUC" 0.382542202668167 0.151924985192573 0.0118034151112409 0.0326683755345108 0.0234675096141935 0.0422895736392292 "prevalence" 1527 769 -"613" "Alistipes_dispar" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.47408646008733 1.01144658451464 0.0118912970621758 0.0328186362422198 0.0118912970621758 0.0237376364795041 "abundance" 1527 83 -"614" "GGB3175_SGB4191" "reads" "reads" "reads" 0.402546139493873 0.290485008964188 0.0118769279738562 0.0328186362422198 0.0236127945296162 0.0424788944178445 "abundance" 1527 154 -"615" "Bacteroides_ovatus" "antibiotics" "Yes" "antibioticsYes" 0.712189035370901 0.260435805726727 0.0123693681767513 0.0340528930164865 0.0123693681767513 0.0245145831306166 "abundance" 1527 1176 -"616" "GGB3267_SGB4317" "diagnosis" "CD" "diagnosisCD" -2.70846062840228 1.00022136004136 0.012373364402101 0.0340528930164865 0.012373364402101 0.0245145831306166 "abundance" 1527 54 -"617" "Alistipes_communis" "diagnosis" "CD" "diagnosisCD" -0.830763683269364 0.257142074707495 0.0125415518491381 0.0344334339181906 0.0249258131754915 0.0447647257029236 "abundance" 1527 407 -"618" "Eisenbergiella_massiliensis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 2.6450618075517 0.862552146205412 0.0125468807317051 0.0344334339181906 0.0125468807317051 0.0248118090874168 "abundance" 1527 417 -"619" "Bacteroides_cellulosilyticus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 4.22236896667693 1.50646454297415 0.0126320290284767 0.0346184918957132 0.0251044898995771 0.044932781921955 "abundance" 1527 433 -"620" "Roseburia_inulinivorans" "reads" "reads" "reads" -0.114427040955117 0.0856374301452417 0.012914103489951 0.0352432377365423 2.93466108721885e-07 1.90122828717982e-06 "abundance" 1527 951 -"621" "GGB3175_SGB4191" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.70525650732008 0.687914352670567 0.0131795973193984 0.035917619472949 0.0261854928532953 0.0465519872947472 "prevalence" 1527 154 -"622" "Phocaeicola_dorei" "age" "age" "age" 0.523500719389242 0.189155135761806 0.0133121161777281 0.0362282381772712 0.0133121161777281 0.0262268557531359 "abundance" 1527 769 -"623" "Veillonella_dispar" "antibiotics" "Yes" "antibioticsYes" -0.519474272703745 0.210029714640751 0.0133857836185003 0.0363780545070231 0.0265923880339193 0.0471959021240652 "prevalence" 1527 526 -"624" "GGB16040_SGB9347" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.75271819729492 0.710188514711023 0.0135884781277122 0.0368264719300272 0.0269923095175971 0.0477451907044933 "prevalence" 1527 114 -"625" "Phocaeicola_vulgatus" "diagnosis" "UC" "diagnosisUC" 0.601690869276425 0.243795838692054 0.0135866054707212 0.0368264719300272 0.0269886150932254 0.0477451907044933 "prevalence" 1527 1288 -"626" "Oscillibacter_sp_ER4" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.77498969757506 0.720026477151701 0.013694718317631 0.0370629911255554 0.0272018913254628 0.0480354468891116 "prevalence" 1527 458 -"627" "Eubacterium_ventriosum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.04904154380937 0.426205187033296 0.0138413989830234 0.037408151608337 0.0274912136402395 0.0484653115260316 "prevalence" 1527 520 -"628" "Ruthenibacterium_lactatiformans" "antibiotics" "Yes" "antibioticsYes" 0.464752091076219 0.188895128943638 0.0138793470453846 0.0374589007274608 0.027566057816363 0.048516261756799 "prevalence" 1527 797 -"629" "Acidaminococcus_intestini" "antibiotics" "Yes" "antibioticsYes" -1.35321478043229 0.487650105418452 0.0139945141017379 0.0376967845978479 0.000410004234004784 0.00128095997369542 "abundance" 1527 173 -"630" "Coprococcus_comes" "antibiotics" "Yes" "antibioticsYes" 0.481897920793246 0.196124060088894 0.014006072475966 0.0376967845978479 0.02781597488573 0.0488746580354923 "prevalence" 1527 759 -"631" "Alistipes_finegoldii" "diagnosis" "CD" "diagnosisCD" -0.326402102543824 0.133124118686164 0.0142118755051899 0.0380932849617847 0.0282217736050048 0.0494232055172223 "prevalence" 1527 639 -"632" "Barnesiella_intestinihominis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.76525481266426 0.719857985189764 0.0141975271133006 0.0380932849617847 0.0281934844504683 0.0494232055172223 "prevalence" 1527 431 -"633" "Bacteroides_eggerthii" "antibiotics" "Yes" "antibioticsYes" 0.53403480510047 0.21905580163769 0.0147731088667425 0.0394892677504991 0.0293279729878964 0.0511597332561387 "prevalence" 1527 409 -"634" "Bacteroides_intestinalis" "age" "age" "age" 0.591560829880379 0.221394975605996 0.0148671720118041 0.039567973743444 5.77787605732681e-17 2.00617059907415e-15 "abundance" 1527 158 -"635" "Ruminococcus_gnavus" "reads" "reads" "reads" -0.599245244801297 0.100583589292857 0.0148835520478154 0.039567973743444 0.00978246819749185 0.0202554635618655 "abundance" 1527 767 -"636" "Faecalibacterium_SGB15346" "antibiotics" "Yes" "antibioticsYes" -0.471462461306196 0.193541194844336 0.0148515095764766 0.039567973743444 0.0294824518162531 0.0512907234233332 "prevalence" 1527 743 -"637" "Rikenellaceae_bacterium" "diagnosis" "UC" "diagnosisUC" -0.746746920562681 0.306566198841513 0.0148571594053397 0.039567973743444 0.0148571594053397 0.0288934812744727 "prevalence" 1527 67 -"638" "Lacrimispora_amygdalina" "age" "age" "age" -0.330900471260489 0.0802016101563664 0.0150192797812545 0.0398745552888197 3.53695396641067e-17 1.33393692447488e-15 "abundance" 1527 865 -"639" "Bacteroides_cellulosilyticus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.77783278970011 1.01736669301743 0.0150734828969404 0.0399641595395137 0.0150734828969404 0.029260290329355 "abundance" 1527 433 -"640" "Ruminococcus_torques" "reads" "reads" "reads" -0.544235279369927 0.0767417904838363 0.0151845890292943 0.0402041828770205 2.5360188692482e-09 2.41264497831181e-08 "abundance" 1527 1093 -"641" "Phocaeicola_massiliensis" "age" "age" "age" 0.140604717648096 0.0582287261421185 0.0157483136376894 0.0416403313234709 0.0312486178929477 0.0542739152877512 "prevalence" 1527 396 -"642" "GGB1680_SGB2312" "diagnosis" "CD" "diagnosisCD" -1.87442486379551 0.777118113913164 0.0158643871462543 0.0418905574105146 0.0158643871462543 0.0304596233208082 "prevalence" 1527 12 -"643" "Oscillibacter_sp_ER4" "diagnosis" "CD" "diagnosisCD" -0.336231969539385 0.139831724529117 0.016192518871776 0.0426993007765862 0.0321228400761392 0.0557006882108424 "prevalence" 1527 458 -"644" "Ruminococcus_sp_BSD2780120874_150323_B10" "antibiotics" "Yes" "antibioticsYes" -2.10524100742246 0.876160467832143 0.0162699492625055 0.0428456615349538 0.0162699492625055 0.0311251203282714 "prevalence" 1527 90 -"645" "Ruminococcus_bromii" "reads" "reads" "reads" 0.14743923254704 0.0613816249070919 0.0163052948582408 0.0428809504078096 0.0323447270760674 0.05599349474152 "prevalence" 1527 429 -"646" "Lachnospira_eligens" "reads" "reads" "reads" -0.569829734684572 0.0895781689855599 0.0164831021344055 0.0432321900276891 2.47490019722865e-08 2.01038046790266e-07 "abundance" 1527 929 -"647" "Collinsella_SGB14861" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.27841947035937 0.53303438834557 0.0164677330319039 0.0432321900276891 0.0326642798325978 0.056454139939809 "prevalence" 1527 593 -"648" "Bacteroides_eggerthii" "age" "age" "age" 0.578596351933614 0.221852350898721 0.0165427155959326 0.0433303837459145 0.0165427155959326 0.031589706454439 "abundance" 1527 409 -"649" "Bifidobacterium_adolescentis" "antibiotics" "Yes" "antibioticsYes" -1.91629219942669 0.747415696274558 0.0166167887393276 0.0434661381481206 0.0166167887393276 0.0316168088445584 "abundance" 1527 427 -"650" "Faecalibacterium_SGB15346" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.8660161644104 0.362154467099718 0.0167893097230136 0.0438587048111879 0.0332967385250518 0.0570801231858032 "prevalence" 1527 743 -"651" "Bacteroides_eggerthii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.28981727459981 0.539601145919229 0.0168338800045188 0.0439164239370224 0.0333843804930311 0.0571376106979593 "prevalence" 1527 409 -"652" "Enterocloster_clostridioformis" "reads" "reads" "reads" -0.725260201839397 0.156246997569666 0.016953178272339 0.0441686804588672 8.36153107032521e-05 0.000314226932749588 "abundance" 1527 312 -"653" "Parasutterella_excrementihominis" "diagnosis" "UC" "diagnosisUC" 0.836350348290426 0.243224409472515 0.0175440511824156 0.0456472383627699 0.0175440511824156 0.0332612532291399 "abundance" 1527 699 -"654" "Clostridium_sp_AF36_4" "reads" "reads" "reads" 0.137127382971277 0.0578011617156892 0.0176730234192363 0.0459216592568985 0.0350337110816956 0.0597667187435712 "prevalence" 1527 568 -"655" "GGB3175_SGB4191" "diagnosis" "CD" "diagnosisCD" -1.37718265626506 0.520931041685149 0.017823434164388 0.0462509832101118 0.017823434164388 0.0336099044242746 "abundance" 1527 154 -"656" "Bacteroides_cellulosilyticus" "reads" "reads" "reads" 0.143873768519257 0.0608646565837268 0.0180870561150239 0.0468728218153271 0.0358469706311397 0.0610554854620702 "prevalence" 1527 433 -"657" "Oscillospiraceae_bacterium" "reads" "reads" "reads" 0.273811033878521 0.116091664958365 0.0183451947632502 0.0474788219435642 0.0363538433555989 0.061819095947685 "prevalence" 1527 81 -"658" "Faecalibacterium_SGB15346" "age" "age" "age" 0.128696118594084 0.0546045419998311 0.0184294141709324 0.0476336974735475 0.036519185035181 0.0620004170372205 "prevalence" 1527 743 -"659" "GGB3478_SGB14857" "antibiotics" "Yes" "antibioticsYes" 5.02206957315339 1.76885772381476 0.018629472191614 0.0480871712845625 0.018629472191614 0.03506724177245 "abundance" 1527 16 -"660" "Roseburia_sp_AF02_12" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.83009359940038 1.07868120584323 0.0187762854908569 0.0484021924131059 0.0187762854908569 0.0352182749498683 "abundance" 1527 363 -"661" "Phocaeicola_coprocola" "diagnosis" "CD" "diagnosisCD" 5.70068445844659 2.40848433597734 0.0188072059124614 0.0484180241804343 0.0188072059124614 0.0352182749498683 "abundance" 1527 101 -"662" "Escherichia_coli" "age" "age" "age" 0.361056033232739 0.11934533132248 0.0191212056026225 0.0490970246353803 0.0378767907015473 0.064099184264157 "abundance" 1527 707 -"663" "Veillonella_rogosae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.31139435386234 0.595731489606051 0.0191940951272788 0.0492195037778251 0.0191940951272788 0.0358742733706308 "abundance" 1527 207 -"664" "Bifidobacterium_longum" "diagnosis" "CD" "diagnosisCD" 0.606752763521186 0.236646335221987 0.0193039131273834 0.0494362336184892 0.0382351851927373 0.064498970548771 "abundance" 1527 843 -"665" "Rikenellaceae_bacterium" "age" "age" "age" 0.260238621724932 0.111265048883483 0.0193402378230692 0.0494644302438184 0.0193402378230692 0.0360835532529348 "prevalence" 1527 67 -"666" "Enterocloster_bolteae" "diagnosis" "CD" "diagnosisCD" 0.634808197178705 0.253156781584985 0.0195567232809344 0.0499527284848965 1.94694876937214e-10 2.41879752994939e-09 "abundance" 1527 866 -"667" "Clostridiaceae_bacterium_Marseille_Q4149" "reads" "reads" "reads" 0.187180285189931 0.0802413646784996 0.0196630755493625 0.0500934154151948 0.0389395145586652 0.0654779098311312 "prevalence" 1527 181 -"668" "Clostridium_sp_AF36_4" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.06083170211004 0.454697700041632 0.0196456097598639 0.0500934154151948 0.0389052695368909 0.0654779098311312 "prevalence" 1527 568 -"669" "Clostridium_symbiosum" "antibiotics" "Yes" "antibioticsYes" 0.89227390827626 0.37474692855016 0.0196940088930916 0.0501068924181002 0.0196940088930916 0.0364218448180468 "abundance" 1527 539 -"670" "Bacteroides_intestinalis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.77097223389645 1.48552189030424 0.0198424460357782 0.0504189070922115 0.0198424460357782 0.0365415454119997 "abundance" 1527 158 -"671" "Bacteroides_caccae" "diagnosis" "UC" "diagnosisUC" -0.358239803357833 0.153858695806825 0.0198925232238624 0.0504805069862689 0.0393893339675128 0.06612899311557 "prevalence" 1527 958 -"672" "Clostridium_sp_AM22_11AC" "diagnosis" "CD" "diagnosisCD" -0.311728126723 0.134276312457329 0.0202575989230724 0.0512737672223879 0.000415991231194585 0.00129323757979312 "prevalence" 1527 730 -"673" "Clostridium_sp_AT4" "diagnosis" "UC" "diagnosisUC" 0.939392239884372 0.310385795652609 0.0207539576507633 0.0523943582036065 2.99306319173336e-18 1.43667033203201e-16 "abundance" 1527 528 -"674" "Alistipes_dispar" "diagnosis" "CD" "diagnosisCD" -1.48119538969573 0.575657083474346 0.0208749649528575 0.0526318471198496 0.0208749649528575 0.0382707690802387 "abundance" 1527 83 -"675" "Blautia_faecis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.03105318886657 0.473618568840398 0.020984558962212 0.0528399848094873 5.31261156921132e-22 5.10010710644287e-20 "abundance" 1527 1125 -"676" "Clostridium_sp_AF34_10BH" "age" "age" "age" 0.298642102357478 0.0851267324431158 0.0212142309035439 0.0533495587973292 0.0212142309035439 0.0387581796438449 "abundance" 1527 960 -"677" "Clostridium_sp_AF36_4" "reads" "reads" "reads" -0.0934090361304446 0.102951667112001 0.0213709584714894 0.053671423944631 0.0350337110816956 0.0597667187435712 "abundance" 1527 568 -"678" "Waltera_intestinalis" "age" "age" "age" 0.389394210608324 0.139130767727834 0.021397154172399 0.053671423944631 0.021397154172399 0.038957577251816 "abundance" 1527 524 -"679" "Alistipes_finegoldii" "age" "age" "age" -0.348704173693503 0.104010595100668 0.0214824898557557 0.0538163912540342 0.0214824898557557 0.0390456270011671 "abundance" 1527 639 -"680" "Bacteroides_intestinalis" "diagnosis" "CD" "diagnosisCD" -1.60523578712083 0.642050034623711 0.0215963603234045 0.0540323790933834 0.0193964506625723 0.0361246065250024 "abundance" 1527 158 -"681" "Dysgonomonas_mossii" "reads" "reads" "reads" -0.466819131246578 0.203497919946925 0.0217919375169723 0.0544519768646596 0.0431089864932009 0.0718029806574451 "prevalence" 1527 31 -"682" "Tyzzerella_nexilis" "reads" "reads" "reads" -0.78527601350401 0.189616347759862 0.0222720041281255 0.0555804547463054 0.0440479660883677 0.0732514207705768 "abundance" 1527 188 -"683" "GGB4237_SGB5728" "reads" "reads" "reads" 0.576060206418237 0.253060572759645 0.0228237057948682 0.0568845932693526 0.0228237057948682 0.0412702625331863 "prevalence" 1527 6 -"684" "GGB9480_SGB14874" "antibiotics" "Yes" "antibioticsYes" -0.573884040358794 0.252408132045593 0.0229879228924637 0.0572208934164001 0.0454474011860175 0.0754598359315008 "prevalence" 1527 332 -"685" "Flavonifractor_plautii" "antibiotics" "Yes" "antibioticsYes" 0.606298800808034 0.242384578747812 0.0231023958960771 0.0572869055595617 0.0456710710960151 0.0755934969865078 "abundance" 1527 1224 -"686" "Gemmiger_formicilis" "age" "age" "age" -0.393859391553182 0.13220326230238 0.0230780722727548 0.0572869055595617 0.0230780722727548 0.0416588791795369 "abundance" 1527 472 -"687" "Parasutterella_SGB9260" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.10563109112761 0.486504582579627 0.0230501993430561 0.0572869055595617 0.0455690869963576 0.0755431018338361 "prevalence" 1527 269 -"688" "Ruminococcus_bicirculans" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.540714281982883 0.2383380625902 0.0232874132413303 0.0576725037687697 0.046032522867188 0.075835170277302 "prevalence" 1527 678 -"689" "Dysgonomonas_mossii" "age" "age" "age" -0.500463227423123 0.221925269129328 0.0241271790486146 0.059676592229105 0.0476722373283853 0.078292196918779 "prevalence" 1527 31 -"690" "Prevotella_stercorea" "diagnosis" "CD" "diagnosisCD" 1.73126612311649 0.772442951949029 0.0250075092074925 0.0617758192053607 0.0250075092074925 0.0448351947760816 "prevalence" 1527 40 -"691" "Prevotella_copri_clade_A" "antibiotics" "Yes" "antibioticsYes" -2.66666520197953 1.14037927650797 0.0252085520541768 0.0621153981259288 0.0252085520541768 0.0450426919952804 "abundance" 1527 289 -"692" "Alistipes_putredinis" "age" "age" "age" -0.304053815963452 0.0798045119103706 0.0253099776264989 0.0622867711362454 1.90284320916668e-05 8.73653229947832e-05 "abundance" 1527 873 -"693" "Alistipes_communis" "age" "age" "age" 0.320511320272252 0.105329219995559 0.0253919991594986 0.0624100205756734 2.55807904506392e-12 4.4284122485041e-11 "abundance" 1527 407 -"694" "Tyzzerella_nexilis" "age" "age" "age" -0.19509436621329 0.0873877497748649 0.0255810174700626 0.0627956132368119 0.0505076464853215 0.0824545233645662 "prevalence" 1527 188 -"695" "Dysgonomonas_mossii" "diagnosis" "UC" "diagnosisUC" -8.99520083254449 3.8146381099932 0.0256382901145954 0.0628572382483305 0.0256382901145954 0.0457331661503594 "abundance" 1527 31 -"696" "Ruminococcus_gnavus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.71509311182354 0.538252076562866 0.0257866363646432 0.062983859320641 0.0257866363646432 0.0459202158533949 "abundance" 1527 767 -"697" "Dysosmobacter_sp_BX15" "age" "age" "age" 0.122214884512267 0.0548056577029754 0.0257495411783078 0.062983859320641 0.0508360434857222 0.0828294383899496 "prevalence" 1527 621 -"698" "Tyzzerella_nexilis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.612196983175096 0.274597849248185 0.0257852353530168 0.062983859320641 0.0509055923438232 0.0828294383899496 "prevalence" 1527 188 -"699" "Dialister_invisus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.48975453641142 0.219956386380171 0.0259741264731035 0.0633626006597305 0.0512735977001661 0.0831719188500391 "prevalence" 1527 726 -"700" "Bacteroides_cellulosilyticus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.19287698041667 0.536473520710553 0.0261785746677013 0.0637817143400103 0.0251044898995771 0.044932781921955 "prevalence" 1527 433 -"701" "Bacteroides_uniformis" "diagnosis" "CD" "diagnosisCD" 0.457104387853418 0.17078733239939 0.0262286073972575 0.0638240334423925 2.32599096720072e-05 0.000103936950155055 "abundance" 1527 1244 -"702" "Ruminococcus_gnavus" "diagnosis" "CD" "diagnosisCD" 0.298822181921908 0.135024213289831 0.0268907033698482 0.0653537741103027 0.0530582968119712 0.0854109168192708 "prevalence" 1527 767 -"703" "Hungatella_hathewayi" "diagnosis" "UC" "diagnosisUC" -0.95386443368978 0.414029311606182 0.0273983061265605 0.0665047082873281 0.0540459450745162 0.0867363495420808 "abundance" 1527 451 -"704" "Blautia_wexlerae" "antibiotics" "Yes" "antibioticsYes" -0.498614703863421 0.226264043455684 0.0275464969292496 0.0667814578160717 0.0543341843654261 0.08706661409695 "prevalence" 1527 1302 -"705" "GGB9453_SGB14844" "antibiotics" "Yes" "antibioticsYes" 0.508664314800966 0.23111995458581 0.0277454303892648 0.0671803853539323 0.054721051871044 0.0875536829936704 "prevalence" 1527 222 -"706" "Clostridium_fessum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.65665776443209 0.602545401022002 0.02782539398246 0.0672589415542006 1.34278351725912e-17 5.45376690086783e-16 "abundance" 1527 926 -"707" "Lachnospira_sp_NSJ_43" "reads" "reads" "reads" -0.735846599142626 0.175578597522385 0.0278467163343645 0.0672589415542006 0.0549179930581225 0.0877358557781806 "abundance" 1527 296 -"708" "Fusicatenibacter_saccharivorans" "diagnosis" "UC" "diagnosisUC" 0.675944650358929 0.177942618494985 0.0278995745438568 0.0673034180971559 4.00782998099176e-07 2.53429249097443e-06 "abundance" 1527 1119 -"709" "Prevotella_sp_885" "age" "age" "age" 1.28038342826663 0.566066638074464 0.0284346403610106 0.068425230622432 0.0284346403610106 0.0497135434126278 "abundance" 1527 69 -"710" "Bilophila_wadsworthia" "antibiotics" "Yes" "antibioticsYes" -0.427082670504985 0.194895324997565 0.0284269195909558 0.068425230622432 0.0560457494244809 0.0894022830698668 "prevalence" 1527 764 -"711" "Clostridium_sp_1001270H_150608_G6" "reads" "reads" "reads" 0.258079521026178 0.2694114033924 0.0285447678331485 0.0686057519630654 0.0562747318956487 0.0896321521595852 "abundance" 1527 141 -"712" "Paraprevotella_clara" "reads" "reads" "reads" 0.189308560240036 0.239640860765475 0.0292072566061832 0.0699399257456886 0.0102480578716512 0.0208917936534047 "abundance" 1527 178 -"713" "Roseburia_faecis" "antibiotics" "Yes" "antibioticsYes" -0.943175010155139 0.359206635741803 0.0293587105617614 0.0702165488833315 0.0293587105617614 0.0511597332561387 "abundance" 1527 922 -"714" "Ruminococcus_bromii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.56970560770797 0.721120842057446 0.0294986235260491 0.0704649271025673 0.0581270782621667 0.0920272783281081 "prevalence" 1527 429 -"715" "Odoribacter_splanchnicus" "diagnosis" "CD" "diagnosisCD" 0.418005912476702 0.152355160014926 0.0299880086442474 0.0715464821622216 0.0590767366260474 0.0933907692771049 "abundance" 1527 757 -"716" "Dysosmobacter_sp_BX15" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.84870241107695 1.01648576281524 0.0311285342804747 0.0740866698953076 0.00311101909769311 0.00760471334991649 "abundance" 1527 621 -"717" "Dorea_longicatena" "age" "age" "age" -0.276658738869766 0.0671571571693282 0.0318601520630497 0.0755518654504844 0.0627052348366188 0.097953739626434 "abundance" 1527 1020 -"718" "Dysosmobacter_welbionis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.699745042226958 0.341654667372603 0.0318482061599248 0.0755518654504844 7.38295629262187e-23 7.7964018450087e-21 "abundance" 1527 1191 -"719" "Clostridium_sp_AF36_4" "antibiotics" "Yes" "antibioticsYes" -1.04595339259144 0.420947395796421 0.0329143215245631 0.0776746186702853 0.0329143215245631 0.0567006909134398 "abundance" 1527 568 -"720" "Prevotella_copri_clade_E" "diagnosis" "CD" "diagnosisCD" 1.65468229373899 0.775654668028519 0.032902429387931 0.0776746186702853 0.032902429387931 0.0567006909134398 "prevalence" 1527 38 -"721" "Prevotella_copri_clade_C" "diagnosis" "CD" "diagnosisCD" 2.30061030830756 1.07902761890992 0.0329974443323584 0.0776953923055855 0.0329974443323584 0.0567513049103754 "prevalence" 1527 16 -"722" "Bacteroides_ilei" "antibiotics" "Yes" "antibioticsYes" 1.13385536650601 0.53202671605779 0.0330726644962939 0.0777665299948955 0.0330726644962939 0.0567881848911973 "prevalence" 1527 17 -"723" "Eubacterium_siraeum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.14929255576693 1.35485111909016 0.0336441739451798 0.0787313962741094 0.0336441739451798 0.0574890739257442 "abundance" 1527 565 -"724" "Bifidobacterium_longum" "diagnosis" "CD" "diagnosisCD" -0.297521344436929 0.140027225773475 0.0336083753656381 0.0787313962741094 0.0382351851927373 0.064498970548771 "prevalence" 1527 843 -"725" "Collinsella_aerofaciens" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.21614486420543 1.21572303329583 0.0346370057219342 0.0807645694279945 4.87741289157536e-05 0.000196585802042121 "abundance" 1527 698 -"726" "Bifidobacterium_longum" "antibiotics" "Yes" "antibioticsYes" 0.772633353215346 0.361410827593211 0.0350418208604639 0.0814170249243121 0.0198147683200928 0.0365415454119997 "abundance" 1527 843 -"727" "Vescimonas_coprocola" "reads" "reads" "reads" -0.577775585109908 0.106963830462073 0.0351725884437832 0.0816237978849791 1.7525035035309e-05 8.15261541730673e-05 "abundance" 1527 599 -"728" "GGB9713_SGB15249" "reads" "reads" "reads" 0.142747900778047 0.0683498926485156 0.0367538760686443 0.0847899336931888 0.0143036227428516 0.0279715289193542 "prevalence" 1527 329 -"729" "Alistipes_shahii" "diagnosis" "UC" "diagnosisUC" -0.547300029114617 0.210070041854388 0.0371530790866719 0.0856098072350906 8.20394367665882e-13 1.51988851272837e-11 "abundance" 1527 673 -"730" "Phocaeicola_coprocola" "diagnosis" "UC" "diagnosisUC" 5.2655094058735 2.4497780765296 0.0373696248959798 0.0858052256718503 0.0373696248959798 0.063342413948884 "abundance" 1527 101 -"731" "Ruminococcus_bicirculans" "antibiotics" "Yes" "antibioticsYes" -1.06141589559453 0.44296250198614 0.0379715666667281 0.0867794634699259 0.0379715666667281 0.0641567590401037 "abundance" 1527 678 -"732" "Bacteroides_caccae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.24512395983153 0.42417003442748 0.0382819839895587 0.0872847102865785 1.45641566956172e-15 4.27215263071437e-14 "abundance" 1527 958 -"733" "Coprococcus_comes" "reads" "reads" "reads" -0.521958152842845 0.0811996601096278 0.0382755581211347 0.0872847102865785 4.02324725633063e-05 0.000169264904489448 "abundance" 1527 759 -"734" "Ruminococcus_lactaris" "diagnosis" "CD" "diagnosisCD" -0.820081726988527 0.325151096546438 0.0392167340596981 0.0890005788067944 3.48470494150439e-12 5.93523938423973e-11 "abundance" 1527 379 -"735" "Dialister_invisus" "antibiotics" "Yes" "antibioticsYes" -0.98140848029027 0.406016426039596 0.0395172626775551 0.0894747755178941 8.73240193094162e-10 9.40960861130035e-09 "abundance" 1527 726 -"736" "Oscillibacter_sp_ER4" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.72581439221983 1.50038940841791 0.0398028962618421 0.0900171982588419 0.0272018913254628 0.0480354468891116 "abundance" 1527 458 -"737" "Bilophila_wadsworthia" "age" "age" "age" -0.277656992921985 0.0788585326769638 0.04024815229032 0.0906266109626469 0.00357489116640904 0.00852163673076286 "abundance" 1527 764 -"738" "Alistipes_putredinis" "diagnosis" "CD" "diagnosisCD" -0.585429025944781 0.190560909006674 0.0403722594382422 0.0907795108657367 2.80422694031404e-05 0.000123902244726846 "abundance" 1527 873 -"739" "Hungatella_hathewayi" "reads" "reads" "reads" 0.116684901082318 0.0569889743165712 0.0406090578821713 0.0912070104617962 0.0209170938775247 0.0382815444274975 "prevalence" 1527 451 -"740" "Tyzzerella_nexilis" "antibiotics" "Yes" "antibioticsYes" 1.69612482700505 0.841037906195133 0.0406797853649681 0.0912609651012028 0.0141438968727477 0.0277619983227167 "abundance" 1527 188 -"741" "Ruminococcus_bromii" "diagnosis" "CD" "diagnosisCD" -0.716268404372159 0.270518968001871 0.0408828552235425 0.0916113521866996 0.0408828552235425 0.068527452565176 "abundance" 1527 429 -"742" "Blautia_wexlerae" "reads" "reads" "reads" -0.497170983438718 0.068658971448431 0.041183291573516 0.0920117374233019 1.68376401331828e-13 3.55610959612822e-12 "abundance" 1527 1302 -"743" "Clostridiales_bacterium" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.03143159124338 0.557460575915583 0.041237508603442 0.0920117374233019 7.12332375623282e-19 3.95906836135887e-17 "abundance" 1527 985 -"744" "GGB33469_SGB15236" "age" "age" "age" 0.36584490459761 0.151922713428887 0.0412498884251855 0.0920117374233019 2.91598233907796e-09 2.72502420359852e-08 "abundance" 1527 293 -"745" "Phocaeicola_massiliensis" "diagnosis" "CD" "diagnosisCD" -0.946207042400448 0.398353128409724 0.0417438373092027 0.0929014329182029 0.0417438373092027 0.0698597340705516 "abundance" 1527 396 -"746" "Prevotella_SGB48271" "diagnosis" "UC" "diagnosisUC" 2.27499823024034 1.11992370237709 0.0422157720116998 0.0937382028532516 0.0422157720116998 0.0705377456398022 "prevalence" 1527 6 -"747" "Candidatus_Cibionibacter_quicibialis" "age" "age" "age" 0.260776449611769 0.0845989149031856 0.042684799917444 0.0944576433054197 0.042684799917444 0.0712087657390535 "abundance" 1527 933 -"748" "Blautia_wexlerae" "antibiotics" "Yes" "antibioticsYes" 0.529571534544262 0.24260268076119 0.0436229515563422 0.0963155337187488 0.0543341843654261 0.08706661409695 "abundance" 1527 1302 -"749" "Bifidobacterium_adolescentis" "reads" "reads" "reads" -0.629367636376329 0.14005662994087 0.0457869159006847 0.100751839718399 0.0019925172602298 0.0050337278153174 "abundance" 1527 427 -"750" "Akkermansia_muciniphila" "diagnosis" "CD" "diagnosisCD" -0.867830927052943 0.364368743134121 0.0458679939553992 0.100816715623003 0.0458679939553992 0.0758006285084531 "abundance" 1527 407 -"751" "Ruminococcus_sp_BSD2780120874_150323_B10" "reads" "reads" "reads" 0.219972158578016 0.11021001204447 0.0459408619026663 0.100863420402034 0.0459408619026663 0.0758024221393994 "prevalence" 1527 90 -"752" "Clostridium_sp_AF34_10BH" "diagnosis" "CD" "diagnosisCD" -0.596409320811636 0.208032103592634 0.0460168807138811 0.10091693031978 3.85953718187472e-06 2.02769714629836e-05 "abundance" 1527 960 -"753" "Anaerostipes_hadrus" "diagnosis" "CD" "diagnosisCD" -0.34924581136644 0.175235451298704 0.0462604741936162 0.101290012787782 0.00190613995622567 0.00483181207131888 "prevalence" 1527 1128 -"754" "Anaerostipes_hadrus" "diagnosis" "UC" "diagnosisUC" -0.367499611695579 0.184419882416682 0.0462906762638122 0.101290012787782 0.000606172329334515 0.00176828171209185 "prevalence" 1527 1128 -"755" "Clostridium_symbiosum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.70516117604531 0.608783118888489 0.0466693175480934 0.102004302560374 0.0466693175480934 0.0767644849389201 "abundance" 1527 539 -"756" "Blautia_faecis" "diagnosis" "CD" "diagnosisCD" 0.405913711138034 0.175109392047652 0.0480940111075561 0.104883591187684 0.0480940111075561 0.0788622293937565 "abundance" 1527 1125 -"757" "Phascolarctobacterium_succinatutens" "antibiotics" "Yes" "antibioticsYes" -1.31387644143007 0.59932297430098 0.0484818408556091 0.105611501707759 0.0484818408556091 0.0793749208426717 "abundance" 1527 125 -"758" "Lachnospira_sp_NSJ_43" "diagnosis" "UC" "diagnosisUC" -0.786351840244195 0.382788175299256 0.0499676040506696 0.10858852970666 8.5902991216908e-11 1.17809816526045e-09 "abundance" 1527 296 -"759" "Clostridium_symbiosum" "diagnosis" "UC" "diagnosisUC" -0.719197225893334 0.346336437220785 0.0504005622342745 0.109303772037483 4.20366864776324e-14 9.86460909341773e-13 "abundance" 1527 539 -"760" "Bacteroides_ilei" "diagnosis" "UC" "diagnosisUC" 2.15633084224247 1.10267625446939 0.0505190119477977 0.109439189962302 0.0505190119477977 0.0824545233645662 "prevalence" 1527 17 -"761" "Bacteroides_thetaiotaomicron" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.30056738723408 0.840125494712622 0.0509385698462789 0.110225875392723 1.80235422435177e-05 8.34774588120821e-05 "abundance" 1527 1062 -"762" "GGB33512_SGB15201" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.75437514070704 1.92562825034307 0.0512132648996266 0.11069769868791 0.0512132648996266 0.0831719188500391 "prevalence" 1527 121 -"763" "Alistipes_SGB2313" "antibiotics" "Yes" "antibioticsYes" -3.62572904940043 1.78316201643902 0.0514866995715115 0.11093535573466 0.0514866995715115 0.0832728531412468 "abundance" 1527 73 -"764" "Enterocloster_bolteae" "antibiotics" "Yes" "antibioticsYes" 0.618140822261166 0.309128656327479 0.0514935351337444 0.11093535573466 0.0514935351337444 0.0832728531412468 "abundance" 1527 866 -"765" "GGB3278_SGB4328" "diagnosis" "UC" "diagnosisUC" -0.988772239727371 0.501131550955936 0.0519453969004346 0.11166260235803 0.0519453969004346 0.0838751362796009 "abundance" 1527 179 -"766" "Roseburia_sp_AF02_12" "age" "age" "age" 0.326949404960402 0.13948604491422 0.0526047853624583 0.11295576988818 0.0526047853624583 0.0848101577751999 "abundance" 1527 363 -"767" "GGB9342_SGB14306" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.71650911754269 1.92851444156505 0.0539627149345089 0.115367384966985 0.0539627149345089 0.0867345920408544 "prevalence" 1527 92 -"768" "GGB3175_SGB4191" "reads" "reads" "reads" 0.170876584128854 0.0893264683747536 0.0557551467849762 0.118936197399392 0.0236127945296162 0.0424788944178445 "prevalence" 1527 154 -"769" "Dysosmobacter_welbionis" "reads" "reads" "reads" -0.207402991593509 0.0627495787247088 0.0562969473291609 0.119830321439194 4.19501679754345e-19 2.6058457283564e-17 "abundance" 1527 1191 -"770" "Bacteroides_mediterraneensis" "diagnosis" "CD" "diagnosisCD" -1.26922838383567 0.665355197906775 0.0564435556261275 0.119942694924795 0.0564435556261275 0.0897656547307088 "prevalence" 1527 13 -"771" "Clostridium_sp_1001270H_150608_G6" "age" "age" "age" 0.594410003128653 0.297626459106204 0.0567443671415023 0.120389243642232 0.0567443671415023 0.0901083484231977 "abundance" 1527 141 -"772" "Lachnospira_pectinoschiza" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.17948879287015 0.686399144851792 0.0568904601545845 0.120568285403534 0.000389339740142534 0.00122363918330511 "abundance" 1527 500 -"773" "Odoribacter_splanchnicus" "reads" "reads" "reads" 0.107611682555651 0.0565535823427291 0.0570631248945957 0.120672452428615 0.0165819565773009 0.0316074840173823 "prevalence" 1527 757 -"774" "Roseburia_intestinalis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.405470745795704 0.21357084911791 0.0576262494156243 0.121468922716429 0.00311036547735802 0.00760471334991649 "prevalence" 1527 842 -"775" "Bacteroides_ilei" "diagnosis" "CD" "diagnosisCD" 2.06954876593167 1.09129650904865 0.0579054688102789 0.121925954800954 0.0579054688102789 0.0918140766721539 "prevalence" 1527 17 -"776" "Parasutterella_excrementihominis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.05517515410692 0.627362867366674 0.0592048211033918 0.12426017232656 8.85002071347616e-06 4.4292046793511e-05 "abundance" 1527 699 -"777" "Clostridiaceae_bacterium" "diagnosis" "CD" "diagnosisCD" 0.361736790832905 0.159707825983686 0.0594631903891336 0.124534913205109 0.000189778982566441 0.000650670797370655 "abundance" 1527 1109 -"778" "Butyrivibrio_crossotus" "antibiotics" "Yes" "antibioticsYes" 1.04304459783207 0.554090705700584 0.0597757875379695 0.124921806255821 0.0597757875379695 0.0943546063379608 "prevalence" 1527 43 -"779" "GGB781_SGB1024" "reads" "reads" "reads" 0.368156915720056 0.195877967826593 0.0601732762138578 0.125414042683444 0.0601732762138578 0.0948402681818415 "prevalence" 1527 18 -"780" "Anaerostipes_hadrus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.692365294604837 0.53628853625609 0.0603927857529395 0.125539897192813 0.000174550089452618 0.000604343916268737 "abundance" 1527 1128 -"781" "Clostridium_sp_1001270H_150608_G6" "antibiotics" "Yes" "antibioticsYes" -2.1668591067075 1.09437103375797 0.0607200178099112 0.125952138854105 0.0607200178099112 0.0954171708441462 "abundance" 1527 141 -"782" "Lachnospira_eligens" "diagnosis" "UC" "diagnosisUC" 0.643836473904998 0.220408736384733 0.0606691145449938 0.125952138854105 0.0606691145449938 0.0954171708441462 "abundance" 1527 929 -"783" "Oscillibacter_sp_ER4" "antibiotics" "Yes" "antibioticsYes" 0.371345400780177 0.198086488416148 0.0608391069777744 0.126047512250797 0.000208348177184312 0.000707445900664417 "prevalence" 1527 458 -"784" "Ruminococcus_sp_BSD2780120874_150323_B10" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.60549739304934 1.92369423793978 0.060895011036209 0.126047512250797 0.060895011036209 0.095549972740322 "prevalence" 1527 90 -"785" "Gemmiger_formicilis" "reads" "reads" "reads" -0.580157331564664 0.123395707067808 0.0610810088453362 0.126298720935224 0.000697702961115 0.00200755947394398 "abundance" 1527 472 -"786" "Barnesiella_intestinihominis" "age" "age" "age" -0.307116705706731 0.119294536083815 0.0614208530411622 0.126733206802989 8.1060204996793e-05 0.000306808517837324 "abundance" 1527 431 -"787" "Enterocloster_clostridioformis" "diagnosis" "CD" "diagnosisCD" 0.79251226215609 0.429174725104292 0.0613965599205109 0.126733206802989 0.000781564795685902 0.00221863554904385 "abundance" 1527 312 -"788" "Parasutterella_SGB9260" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.65435272686178 1.27905051442886 0.0620401198527856 0.127677897446099 0.0620401198527856 0.0972023242797353 "abundance" 1527 269 -"789" "Ruthenibacterium_lactatiformans" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.878674598715329 0.531089562117834 0.0620747198432929 0.127677897446099 5.49303871355893e-08 4.11393537696329e-07 "abundance" 1527 797 -"790" "Roseburia_faecis" "diagnosis" "UC" "diagnosisUC" 0.684700155934643 0.25349843309907 0.0622575499516115 0.127692507570225 8.84707441975829e-05 0.000328961640396646 "abundance" 1527 922 -"791" "Sutterella_wadsworthensis" "diagnosis" "UC" "diagnosisUC" -0.503617887051781 0.227694168316737 0.0621933026978202 0.127692507570225 0.000308111889372408 0.00100732555782434 "abundance" 1527 536 -"792" "Ruthenibacterium_lactatiformans" "diagnosis" "UC" "diagnosisUC" -0.543975291773804 0.256379970328486 0.0625886449809885 0.128060955280473 0.0625886449809885 0.0979164579258131 "abundance" 1527 797 -"793" "Waltera_intestinalis" "reads" "reads" "reads" -0.628773302955068 0.151957962337625 0.0644275503028713 0.131410681932996 0.00558322790161728 0.0124123971875955 "abundance" 1527 524 -"794" "Odoribacter_splanchnicus" "antibiotics" "Yes" "antibioticsYes" 0.42450823622661 0.20659657266389 0.0655213054150496 0.133363157063549 2.65215629142135e-05 0.000117675506039535 "abundance" 1527 757 -"795" "Haemophilus_parainfluenzae" "antibiotics" "Yes" "antibioticsYes" 0.789916553995085 0.433986083242275 0.0658052048987499 0.133801634102141 0.000569953122493146 0.00167651949123332 "abundance" 1527 674 -"796" "Odoribacter_splanchnicus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.07406912679359 0.394619649730969 0.066627935291301 0.134912938403318 5.69132330185083e-14 1.30652987103358e-12 "abundance" 1527 757 -"797" "GGB9708_SGB15234" "age" "age" "age" 0.337793033837338 0.159852915666386 0.0681791749543494 0.137626144484296 4.0213540935834e-08 3.09967147651392e-07 "abundance" 1527 282 -"798" "Faecalibacterium_prausnitzii" "reads" "reads" "reads" -0.232317934307453 0.0510583281382765 0.0684749446272086 0.13797848014823 0.000238359303993394 0.000799071190530235 "abundance" 1527 1374 -"799" "Escherichia_coli" "age" "age" "age" -0.0974081485836013 0.0537149504439073 0.0697659678304448 0.13953193566089 0.0378767907015473 0.064099184264157 "prevalence" 1527 707 -"800" "Bacteroides_uniformis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.693508670910739 0.561217225405484 0.071776210150588 0.142986824327704 4.33188262689049e-08 3.31483192318577e-07 "abundance" 1527 1244 -"801" "Clostridium_sp_AT4" "reads" "reads" "reads" -0.533337454660685 0.10147333371757 0.071786118047839 0.142986824327704 1.0049251404081e-08 8.55807216347546e-08 "abundance" 1527 528 -"802" "Anaerostipes_hadrus" "reads" "reads" "reads" -0.480581153485798 0.0709116986132836 0.0739046690392513 0.146015898182707 0.000485606514429422 0.00146097002631758 "abundance" 1527 1128 -"803" "Bacteroides_xylanisolvens" "reads" "reads" "reads" -0.559847655358423 0.118429899464631 0.0742820263567346 0.146465266903188 9.5031602567486e-07 5.70189615404916e-06 "abundance" 1527 959 -"804" "Clostridium_sp_AF34_10BH" "diagnosis" "UC" "diagnosisUC" -0.475641745362066 0.226440997105771 0.0747114824805171 0.146721053350263 9.61535014588875e-08 6.90735357418947e-07 "abundance" 1527 960 -"805" "Proteus_mirabilis" "diagnosis" "CD" "diagnosisCD" -1.64045253864678 0.864221777454415 0.0767636000262917 0.150296667786948 0.00413904541617983 0.00962320605362848 "abundance" 1527 100 -"806" "Roseburia_intestinalis" "age" "age" "age" 0.0955598525616884 0.0541061053134444 0.077369587487596 0.150878417116529 0.00759266286714871 0.0163964253327383 "prevalence" 1527 842 -"807" "Coprococcus_comes" "antibiotics" "Yes" "antibioticsYes" 0.485718666621989 0.266144920095461 0.0778514690062451 0.151364945709655 0.02781597488573 0.0488746580354923 "abundance" 1527 759 -"808" "Vescimonas_coprocola" "diagnosis" "CD" "diagnosisCD" 0.426419025909188 0.230114164677867 0.0796050650101143 0.154313786735876 1.20567965851707e-17 5.09279087757612e-16 "abundance" 1527 599 -"809" "Alistipes_finegoldii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 4.82378020902 2.51305571387555 0.079884187137701 0.154701389164586 0.00662932899403318 0.0145542025315988 "abundance" 1527 639 -"810" "Ruminococcus_torques" "diagnosis" "UC" "diagnosisUC" 0.575088003818245 0.197405684802219 0.0805135434748194 0.155734958809831 0.00590348175220569 0.0130420015278854 "abundance" 1527 1093 -"811" "GGB9713_SGB15249" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.61776278799219 1.36466991004242 0.0832567272695445 0.159807116979067 4.95790035476593e-05 0.000199070067476533 "abundance" 1527 329 -"812" "GGB3746_SGB5089" "reads" "reads" "reads" -0.537657650741871 0.108994436570417 0.0837789610096547 0.160494205698887 2.65378036029428e-07 1.7406161866278e-06 "abundance" 1527 651 -"813" "Akkermansia_muciniphila" "age" "age" "age" 0.292073587578478 0.140994042235323 0.0839220024982923 0.160610766779298 7.31940996291392e-12 1.15362640609509e-10 "abundance" 1527 407 -"814" "Clostridium_sp_AF34_10BH" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.80614497683748 0.786932155578375 0.0872749650345832 0.165729136712901 0.0011175646134256 0.0030494786350838 "abundance" 1527 960 -"815" "Bacteroides_faecis" "antibiotics" "Yes" "antibioticsYes" -1.40762075623707 0.769694494621102 0.0909253127268008 0.172237949303484 0.00435176270004469 0.0100777662527351 "abundance" 1527 434 -"816" "Clostridium_sp_1001270H_150608_G6" "diagnosis" "CD" "diagnosisCD" 0.873012278190751 0.531063584673722 0.0911139699010073 0.172349174430366 1.12035153400408e-10 1.44279417061989e-09 "abundance" 1527 141 -"817" "Alistipes_putredinis" "reads" "reads" "reads" -0.193726641151932 0.0818596328014593 0.0912074584493049 0.172359162292013 0.00172858457505892 0.00444132679139227 "abundance" 1527 873 -"818" "Veillonella_parvula" "diagnosis" "CD" "diagnosisCD" 0.572235639853203 0.342689739367321 0.0913422751806579 0.172447155268604 0.000964974803006334 0.00270295329436257 "abundance" 1527 547 -"819" "Firmicutes_bacterium_AF16_15" "diagnosis" "UC" "diagnosisUC" -0.470165412763581 0.245650098478449 0.0924733644349521 0.174245857382735 1.35495273300473e-23 2.0440429800757e-21 "abundance" 1527 827 -"820" "Prevotella_sp_885" "diagnosis" "CD" "diagnosisCD" 4.45525143704639 2.64738813342532 0.0930434412200145 0.174866398268933 0.000125494848308711 0.000446203905097639 "abundance" 1527 69 -"821" "Blautia_wexlerae" "diagnosis" "CD" "diagnosisCD" -0.37761070125131 0.229185095398675 0.0994299978321128 0.184507327411157 0.0141981501362107 0.0278167839403311 "prevalence" 1527 1302 -"822" "Clostridium_sp_AF36_4" "diagnosis" "CD" "diagnosisCD" 0.368565969193138 0.211261705169557 0.100240746446311 0.185659164508144 2.7167126133903e-08 2.18217966439092e-07 "abundance" 1527 568 -"823" "Clostridium_leptum" "age" "age" "age" 0.0905921870612108 0.0552419620271482 0.101022597245891 0.186930071040219 0.0120482980743405 0.0239604571873889 "prevalence" 1527 652 -"824" "GGB3746_SGB5089" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.866550214310869 0.614633636489033 0.102254796528457 0.188212584897142 0.00011601008727036 0.000415276786974577 "abundance" 1527 651 -"825" "Bifidobacterium_adolescentis" "diagnosis" "UC" "diagnosisUC" -0.24165628758823 0.148879950540917 0.104554765361341 0.191830996728694 0.00701373085285419 0.0153026854971364 "prevalence" 1527 427 -"826" "Eisenbergiella_massiliensis" "reads" "reads" "reads" -0.599586681000197 0.156007547375745 0.104859861417919 0.192210290066242 0.00685626398716313 0.0149900926924312 "abundance" 1527 417 -"827" "Bifidobacterium_adolescentis" "diagnosis" "CD" "diagnosisCD" -0.684591916052168 0.346316618671099 0.107320790771002 0.196352832552938 2.24820638448719e-14 5.79050229760602e-13 "abundance" 1527 427 -"828" "Clostridium_sp_AM49_4BH" "diagnosis" "CD" "diagnosisCD" -0.680169719834852 0.344455627865946 0.109579583394247 0.199923908452248 2.22201342060633e-28 5.86611543040072e-26 "abundance" 1527 344 -"829" "GGB1266_SGB1699" "diagnosis" "UC" "diagnosisUC" -1.46689257776464 0.932093625210828 0.110729945769104 0.201646145417362 0.000523613426981026 0.00155756557434356 "abundance" 1527 84 -"830" "Ruminococcus_gnavus" "diagnosis" "UC" "diagnosisUC" -0.495058884756246 0.288790829059667 0.111799357161966 0.20340404459449 0.00387153095321227 0.00908519263687146 "abundance" 1527 767 -"831" "Enterocloster_bolteae" "age" "age" "age" -0.0852020079205708 0.0537759732335606 0.113105445757315 0.205016735630607 0.000366541459680289 0.00116938906774134 "prevalence" 1527 866 -"832" "Barnesiella_intestinihominis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.43621341804771 1.78302137945495 0.114183188030342 0.206711728156339 0.0281934844504683 0.0494232055172223 "abundance" 1527 431 -"833" "Phascolarctobacterium_succinatutens" "diagnosis" "CD" "diagnosisCD" -0.728317152224182 0.387457101516201 0.119289616123629 0.214633434535517 1.90584851419251e-06 1.07624386683812e-05 "abundance" 1527 125 -"834" "Hungatella_hathewayi" "diagnosis" "UC" "diagnosisUC" 0.24508703939299 0.157484682821401 0.119646389302096 0.215077318027872 0.0540459450745162 0.0867363495420808 "prevalence" 1527 451 -"835" "Candidatus_Cibionibacter_quicibialis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.887859058810972 0.805458498365363 0.121659072182331 0.217893516997503 0.000593113722515665 0.00173498086143086 "abundance" 1527 933 -"836" "Firmicutes_bacterium_AF16_15" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.16087511639677 0.986486283690652 0.121502388549888 0.217893516997503 0.00707014648308301 0.0153307488421677 "abundance" 1527 827 -"837" "Lachnospira_sp_NSJ_43" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.1088161775665 1.84965555194746 0.121459320067735 0.217893516997503 0.0116596885979017 0.0233636264883951 "abundance" 1527 296 -"838" "Clostridium_sp_AF20_17LB" "reads" "reads" "reads" -0.17676648868894 0.102505160422047 0.122350249257903 0.218930757371742 6.35577818484257e-09 5.59308480266146e-08 "abundance" 1527 654 -"839" "Alistipes_dispar" "diagnosis" "UC" "diagnosisUC" -1.11903534416274 0.738635139372199 0.123870407319395 0.221315818286167 0.0036370046332325 0.00863073459032252 "abundance" 1527 83 -"840" "Bacteroides_faecis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.76730568435311 0.500314162610332 0.125116337080671 0.223063250598203 0.0104381269186518 0.0212382697998002 "prevalence" 1527 434 -"841" "Bacteroides_ovatus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.58258683704402 0.744963046314089 0.130248588836955 0.231368856897645 9.0039462027077e-15 2.37704179751483e-13 "abundance" 1527 1176 -"842" "Dorea_longicatena" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.463959700471898 0.375439374816682 0.131938543140576 0.233733375608962 3.60396617067098e-11 5.1429571300386e-10 "abundance" 1527 1020 -"843" "Enterocloster_bolteae" "reads" "reads" "reads" -0.494087345917362 0.0967816992796847 0.133182119401108 0.235509376750919 5.96384546270019e-08 4.40407049553245e-07 "abundance" 1527 866 -"844" "Bilophila_wadsworthia" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.18520155863276 0.596304444357551 0.133658324312149 0.235924449598861 4.72335849294945e-13 8.90690458670468e-12 "abundance" 1527 764 -"845" "Prevotella_copri_clade_A" "age" "age" "age" -0.550572026485029 0.34837375898976 0.137849444009547 0.241557234507552 8.08112331479256e-07 4.90440587380514e-06 "abundance" 1527 289 -"846" "Bacteroides_finegoldii" "age" "age" "age" 0.306807081006083 0.188428856309006 0.139664967751079 0.243233810965656 4.02090701505688e-05 0.000169264904489448 "abundance" 1527 333 -"847" "Eubacterium_ventriosum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.11591812773915 1.2610495685808 0.139666497391743 0.243233810965656 5.25061863688878e-06 2.71796729438948e-05 "abundance" 1527 520 -"848" "Odoribacter_splanchnicus" "diagnosis" "CD" "diagnosisCD" -0.199937604749092 0.136084315681673 0.141773512915748 0.246360876124837 0.0590767366260474 0.0933907692771049 "prevalence" 1527 757 -"849" "Clostridium_sp_AM22_11AC" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.29764720428133 0.698146942537224 0.143003132992106 0.247939770955257 1.04458801944984e-09 1.07095626071751e-08 "abundance" 1527 730 -"850" "Parasutterella_excrementihominis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.86833484176525 0.975715134518047 0.143589876905174 0.248736364780772 1.9473394617589e-05 8.86375203283362e-05 "abundance" 1527 699 -"851" "GGB3278_SGB4328" "diagnosis" "CD" "diagnosisCD" -0.827062613003028 0.492913374278143 0.144260794820411 0.249677230362341 6.31877105946789e-06 3.22348900425029e-05 "abundance" 1527 179 -"852" "Dialister_invisus" "age" "age" "age" 0.192488951566761 0.0943574221455816 0.146749585472944 0.252197616547171 4.47353626766817e-13 8.58918963392289e-12 "abundance" 1527 726 -"853" "Phocaeicola_vulgatus" "reads" "reads" "reads" -0.192849083402186 0.0985466167216315 0.147400032705129 0.252870644342249 0.00183909067057018 0.00469101388435291 "abundance" 1527 1288 -"854" "Faecalibacterium_SGB15315" "diagnosis" "UC" "diagnosisUC" 0.621291652441702 0.318284296961143 0.148699962314184 0.254876952949048 1.49640689854959e-05 7.05448966459094e-05 "abundance" 1527 619 -"855" "Fusicatenibacter_saccharivorans" "reads" "reads" "reads" -0.451056122480753 0.0700736401081441 0.152371394298081 0.260712525795491 2.07043138005374e-07 1.39259588365398e-06 "abundance" 1527 1119 -"856" "Faecalibacterium_SGB15315" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.42464869219889 1.52709064436575 0.152627876529246 0.260922896533812 3.73477687508988e-07 2.37585806029814e-06 "abundance" 1527 619 -"857" "Blautia_obeum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.573290870512183 0.500006247207203 0.154892339462795 0.26433155572952 2.33418139101164e-10 2.83321327460723e-09 "abundance" 1527 899 -"858" "Veillonella_parvula" "reads" "reads" "reads" 0.0796438663850514 0.0560914096197067 0.155638488909322 0.265141767505507 5.45584141108998e-05 0.000216592801883873 "prevalence" 1527 547 -"859" "Roseburia_sp_AF02_12" "diagnosis" "CD" "diagnosisCD" 0.518682971784118 0.382241610512335 0.155929641326562 0.265406375568034 4.87130918614863e-19 2.85783472254053e-17 "abundance" 1527 363 -"860" "Oscillibacter_sp_ER4" "diagnosis" "CD" "diagnosisCD" 0.338768215589729 0.240149023861549 0.157948526364428 0.268141981334573 0.0321228400761392 0.0557006882108424 "abundance" 1527 458 -"861" "Clostridiaceae_bacterium" "diagnosis" "UC" "diagnosisUC" 0.455669914850083 0.174810256359809 0.159969757468113 0.2711022602712 4.15655323953897e-06 2.17293080245205e-05 "abundance" 1527 1109 -"862" "Parabacteroides_distasonis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.576464447647923 0.666553764698118 0.162782696485784 0.274915634341591 1.08524148909607e-12 1.97588795256112e-11 "abundance" 1527 1140 -"863" "Clostridium_leptum" "reads" "reads" "reads" -0.499771566218301 0.110688434879345 0.168172099774172 0.28230952144221 5.78323752675682e-09 5.1320158220632e-08 "abundance" 1527 652 -"864" "Bacteroides_eggerthii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -4.7887512420518 3.30916199973186 0.168414752567988 0.282379717077865 0.000375160836618471 0.00118722407186406 "abundance" 1527 409 -"865" "Dorea_longicatena" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.416588267930747 0.552848744464804 0.169284916385096 0.282720279159382 0.000794635924916801 0.00224969312791459 "abundance" 1527 1020 -"866" "Phocaeicola_massiliensis" "age" "age" "age" -0.243621415870622 0.136520155407739 0.173505852041185 0.288782312511478 0.0312486178929477 0.0542739152877512 "abundance" 1527 396 -"867" "Bacteroides_eggerthii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.81797698214068 2.3618064338227 0.173953569956923 0.289281085698577 0.0333843804930311 0.0571376106979593 "abundance" 1527 409 -"868" "Roseburia_inulinivorans" "antibiotics" "Yes" "antibioticsYes" -0.660868498508471 0.397511748428766 0.174265160244463 0.289552825780341 4.40913357501693e-10 5.00650005937406e-09 "abundance" 1527 951 -"869" "Eubacterium_siraeum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.20737154071798 1.9175502201583 0.17574009022268 0.29150775576835 0.0100055563591749 0.0205704042775959 "abundance" 1527 565 -"870" "Fusicatenibacter_saccharivorans" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.31934041892984 0.643376302204644 0.177935467152366 0.29439957901416 2.30095523352743e-05 0.000103396116025743 "abundance" 1527 1119 -"871" "Bacteroides_thetaiotaomicron" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.591977550893572 0.548546464291225 0.178424886518738 0.294655007716895 1.66167694580551e-17 6.49900316581712e-16 "abundance" 1527 1062 -"872" "Haemophilus_parainfluenzae" "age" "age" "age" -0.220441576083683 0.117106287652162 0.179504021853672 0.295742713914059 6.58221613448968e-16 1.9859486394346e-14 "abundance" 1527 674 -"873" "Phascolarctobacterium_faecium" "age" "age" "age" 0.18594636137812 0.103958798837927 0.180016243342962 0.296087322804838 6.38803863083726e-23 7.49529866018239e-21 "abundance" 1527 503 -"874" "Gemmiger_formicilis" "diagnosis" "CD" "diagnosisCD" -0.469343499140584 0.252242452456381 0.181777830387148 0.298375417604218 2.33042690810267e-11 3.56656639848757e-10 "abundance" 1527 472 -"875" "Lacrimispora_celerecrescens" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.707365938882774 0.655261615942506 0.185355812336792 0.303083897327273 4.93893048759914e-10 5.49001115253125e-09 "abundance" 1527 756 -"876" "Vescimonas_coprocola" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.45487649360724 1.38779824202923 0.185347381333703 0.303083897327273 0.00414636245681909 0.00962320605362848 "abundance" 1527 599 -"877" "Clostridiaceae_bacterium_Marseille_Q4149" "age" "age" "age" 0.294105225864926 0.206833017620172 0.187311069541558 0.305404533919733 0.000737848028203604 0.00210018198863344 "abundance" 1527 181 -"878" "Eisenbergiella_massiliensis" "diagnosis" "CD" "diagnosisCD" 0.500409585463025 0.403985263358128 0.189205628996482 0.307773295270092 3.80027532638227e-05 0.00016181817518789 "abundance" 1527 417 -"879" "Bacteroides_salyersiae" "reads" "reads" "reads" -0.0485066471404458 0.222591193506564 0.191798043455771 0.310757360624027 1.47407608326671e-05 6.98037822389976e-05 "abundance" 1527 150 -"880" "Candidatus_Cibionibacter_quicibialis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.551149673744404 0.540440297946456 0.193956366583313 0.313993985338686 1.4273156803436e-16 4.71014174513389e-15 "abundance" 1527 933 -"881" "Bacteroides_finegoldii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.22999800417996 1.53725537193009 0.195441688889787 0.315875153093998 0.00098294771718455 0.00273695200294155 "abundance" 1527 333 -"882" "Phascolarctobacterium_faecium" "reads" "reads" "reads" -0.194634822797397 0.109968615968396 0.196279669146747 0.316705593321836 3.21195223781793e-05 0.00013844169645452 "abundance" 1527 503 -"883" "Waltera_intestinalis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.70437698962945 1.13035921806165 0.197143629161682 0.3178371711072 1.52028383571596e-05 7.10362712617723e-05 "abundance" 1527 524 -"884" "Faecalibacterium_SGB15346" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.637237992583789 0.783903629705391 0.199871129137278 0.320399692905732 0.0332967385250518 0.0570801231858032 "abundance" 1527 743 -"885" "GGB16040_SGB9347" "diagnosis" "UC" "diagnosisUC" 1.03166170849752 0.717013304511473 0.20037278645384 0.320399692905732 0.000250052424594992 0.000835618229026302 "abundance" 1527 114 -"886" "Roseburia_hominis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.45779824406539 0.791080492201943 0.199589380787837 0.320399692905732 0.0153883794573609 0.0297455042124643 "abundance" 1527 876 -"887" "Clostridium_symbiosum" "diagnosis" "CD" "diagnosisCD" -0.540679542041167 0.338365905069044 0.206753679309205 0.329255655558424 5.23012508049999e-05 0.00020841555037766 "abundance" 1527 539 -"888" "Bilophila_wadsworthia" "diagnosis" "UC" "diagnosisUC" 0.456676961828881 0.22590573344575 0.210669372939253 0.333588293941086 5.5897634788261e-08 4.15689453073265e-07 "abundance" 1527 764 -"889" "GGB3746_SGB5089" "diagnosis" "UC" "diagnosisUC" 0.490430567037127 0.265594472578938 0.214203407166832 0.336999563288236 0.000189100209090789 0.000650455442344864 "abundance" 1527 651 -"890" "Clostridiales_bacterium" "diagnosis" "CD" "diagnosisCD" 0.229908373107454 0.179332721673216 0.214739687555038 0.337300120162817 0.010546735524422 0.0214179859880569 "abundance" 1527 985 -"891" "Lachnospira_eligens" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.491114899589603 0.514607745786861 0.215184547957086 0.337727394946303 5.0969022435474e-09 4.56129556710682e-08 "abundance" 1527 929 -"892" "Collinsella_aerofaciens" "reads" "reads" "reads" -0.45921439006824 0.0918845588328283 0.223779380270616 0.348140851153491 0.000384390298782764 0.00121169001646149 "abundance" 1527 698 -"893" "Dorea_longicatena" "reads" "reads" "reads" -0.435455396972824 0.071523781779385 0.226201438382933 0.351349451987481 4.82004576993634e-05 0.000195017943795125 "abundance" 1527 1020 -"894" "GGB9480_SGB14874" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.14381642938536 1.11193467490141 0.229085615923815 0.35414026385691 8.17397729239193e-06 4.13000957931382e-05 "abundance" 1527 332 -"895" "Clostridium_sp_AM49_4BH" "age" "age" "age" 0.188290781908663 0.129894721050219 0.230024469206301 0.355029867953485 5.0532389281464e-05 0.000202129557125856 "abundance" 1527 344 -"896" "Ruminococcus_bicirculans" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.480432327978524 0.537222777700622 0.236909359289694 0.362790664617603 0.046032522867188 0.075835170277302 "abundance" 1527 678 -"897" "Eisenbergiella_massiliensis" "age" "age" "age" 0.0690146817786512 0.059132948767349 0.243165772814224 0.372079812121373 0.00272027205856354 0.00673855617146329 "prevalence" 1527 417 -"898" "GGB16040_SGB9347" "age" "age" "age" -0.377715269248558 0.29676452708594 0.243921635531433 0.372944347283584 5.2914995298118e-24 9.31303917246876e-22 "abundance" 1527 114 -"899" "Gemmiger_formicilis" "antibiotics" "Yes" "antibioticsYes" 0.385934831172204 0.356370266114228 0.244240814794729 0.373140384760673 1.93906231430634e-06 1.08341259466005e-05 "abundance" 1527 472 -"900" "Phocaeicola_massiliensis" "diagnosis" "UC" "diagnosisUC" 0.176146269611292 0.151721537060031 0.245648425991752 0.374704937070947 0.000206761686979059 0.000704323682096407 "prevalence" 1527 396 -"901" "GGB33469_SGB15236" "diagnosis" "UC" "diagnosisUC" 0.603025213464388 0.416924276113183 0.252660356870151 0.383603991704954 3.56569913978839e-10 4.13777834243576e-09 "abundance" 1527 293 -"902" "Roseburia_sp_AF02_12" "diagnosis" "UC" "diagnosisUC" 0.598372391324287 0.412178713933475 0.253304769962291 0.383985663697686 2.39141160082146e-13 4.8564050970528e-12 "abundance" 1527 363 -"903" "Dysgonomonas_mossii" "age" "age" "age" 6.57308493363377 5.64625456073759 0.25453584751605 0.385254102282231 0.0476722373283853 0.078292196918779 "abundance" 1527 31 -"904" "Coprococcus_eutactus" "diagnosis" "CD" "diagnosisCD" -0.700246785803785 0.532258259690356 0.255253627284641 0.38604147655897 3.00642900043574e-09 2.78490265303521e-08 "abundance" 1527 177 -"905" "Tyzzerella_nexilis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.33787543155571 0.794414695456784 0.257646120720568 0.388457191271597 9.86979831387781e-05 0.000361892604842186 "abundance" 1527 188 -"906" "Flavonifractor_plautii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.00960550565482 0.484636767083718 0.25965941420251 0.390588526059818 0.00375609155560453 0.00885364438106781 "abundance" 1527 1224 -"907" "Clostridium_sp_AF34_10BH" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.586236868835573 0.679767119233582 0.262680824139666 0.393316728252036 1.63874353803439e-15 4.67706263828194e-14 "abundance" 1527 960 -"908" "GGB1549_SGB2133" "diagnosis" "UC" "diagnosisUC" -1.22667497063501 1.1275366320048 0.262528066633433 0.393316728252036 0.0177571104752449 0.033554387726779 "abundance" 1527 46 -"909" "Bifidobacterium_adolescentis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.40866599230002 1.61119006227304 0.263394443313368 0.393622459737663 0.0039004944198316 0.00913286498302034 "abundance" 1527 427 -"910" "Fusicatenibacter_saccharivorans" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.310703461581381 0.399988157585107 0.263489343570555 0.393622459737663 9.03328999910582e-22 7.94929519921312e-20 "abundance" 1527 1119 -"911" "Clostridiales_bacterium" "reads" "reads" "reads" -0.246804818433393 0.0796140546498427 0.264267362420389 0.394280902932854 2.70051478028797e-14 6.78986573329547e-13 "abundance" 1527 985 -"912" "Eubacterium_rectale" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.22999897595742 0.707962816536705 0.264535447157099 0.394280902932854 2.52664487222628e-11 3.81162426438708e-10 "abundance" 1527 1211 -"913" "GGB9713_SGB15249" "diagnosis" "CD" "diagnosisCD" -0.495295038496536 0.347545687066164 0.264409527962423 0.394280902932854 3.12948462284242e-05 0.000135439990234491 "abundance" 1527 329 -"914" "Flavonifractor_plautii" "antibiotics" "Yes" "antibioticsYes" -0.238991975231476 0.215875406725558 0.268258080176977 0.398613147274382 0.0456710710960151 0.0755934969865078 "prevalence" 1527 1224 -"915" "Phocaeicola_plebeius" "diagnosis" "CD" "diagnosisCD" 0.299720971226049 0.271041241401472 0.268807398427339 0.39883529245113 2.50330975869953e-06 1.3487219924422e-05 "prevalence" 1527 127 -"916" "Clostridium_fessum" "antibiotics" "Yes" "antibioticsYes" -0.435006903602648 0.282529571683648 0.272121281053909 0.402212544008577 0.00341552635464942 0.00821593583259632 "abundance" 1527 926 -"917" "Faecalibacterium_SGB15315" "age" "age" "age" -0.198658536195502 0.137169819612974 0.272015505838983 0.402212544008577 1.32588040929311e-05 6.36422596460693e-05 "abundance" 1527 619 -"918" "GGB9708_SGB15234" "diagnosis" "UC" "diagnosisUC" 0.652424075200694 0.487884814208459 0.272624558592321 0.402651842395613 7.70506466725872e-07 4.7039322969069e-06 "abundance" 1527 282 -"919" "Eubacterium_ventriosum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.673767551472049 0.962040161443666 0.273334603936591 0.403395631489501 0.0274912136402395 0.0484653115260316 "abundance" 1527 520 -"920" "Blautia_obeum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.18227773707126 0.680718299073315 0.276194568407798 0.407308820127424 0.000420241935828961 0.00129758913519118 "abundance" 1527 899 -"921" "Phascolarctobacterium_faecium" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.901609764504935 0.588594392138528 0.279618556027212 0.412047253753524 3.04996841347947e-05 0.000133089530770013 "abundance" 1527 503 -"922" "Tyzzerella_nexilis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.507369685053601 0.633300370289403 0.282994812012233 0.416081160776452 0.0509055923438232 0.0828294383899496 "abundance" 1527 188 -"923" "Coprococcus_comes" "diagnosis" "CD" "diagnosisCD" -0.142680168689724 0.134244883194434 0.287856756306678 0.421977536368283 0.000996897679803714 0.00276305498654258 "prevalence" 1527 759 -"924" "Clostridium_sp_AT4" "diagnosis" "CD" "diagnosisCD" 0.300492351612738 0.31057092934057 0.288691786375789 0.422549625901343 1.56508398364717e-07 1.06627657208478e-06 "abundance" 1527 528 -"925" "Lacrimispora_amygdalina" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.327618440942044 0.655156509207217 0.288680646228431 0.422549625901343 4.81367217947703e-05 0.000195017943795125 "abundance" 1527 865 -"926" "Phascolarctobacterium_faecium" "antibiotics" "Yes" "antibioticsYes" 0.328764274665612 0.345621070699285 0.295541798003589 0.42983042130821 0.000143490864931606 0.000505087844559253 "abundance" 1527 503 -"927" "Proteus_mirabilis" "diagnosis" "UC" "diagnosisUC" -1.02292960525924 1.02436388153245 0.295683136141185 0.42983042130821 0.0154361139284379 0.0297455042124643 "abundance" 1527 100 -"928" "GGB9453_SGB14844" "diagnosis" "UC" "diagnosisUC" 0.201709914265843 0.192961066489573 0.295865873418394 0.42983042130821 0.0132571978726099 0.0261674784177123 "prevalence" 1527 222 -"929" "Faecalibacterium_SGB15315" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.834523901711968 1.17098325786561 0.297602176301346 0.432031688330483 0.0196628339759696 0.0364218448180468 "abundance" 1527 619 -"930" "Roseburia_hominis" "diagnosis" "CD" "diagnosisCD" -0.339498761823195 0.205796453028776 0.299821793449736 0.43460814866527 2.72088384812913e-07 1.77361317507677e-06 "abundance" 1527 876 -"931" "Bilophila_wadsworthia" "antibiotics" "Yes" "antibioticsYes" 0.289487102069002 0.315423944608307 0.309580023290619 0.446764671720731 0.0560457494244809 0.0894022830698668 "abundance" 1527 764 -"932" "Lachnospira_eligens" "diagnosis" "CD" "diagnosisCD" 0.201337079402031 0.213667614121984 0.311052158413504 0.44814234323272 0.00136041001188853 0.00362776003170274 "abundance" 1527 929 -"933" "Alistipes_communis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.06234131349911 0.805078755779418 0.311705263156782 0.448506689402321 2.33764937843341e-07 1.54284858976605e-06 "abundance" 1527 407 -"934" "Bacteroides_ovatus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.278028707739532 0.429368354125472 0.313701998626956 0.451047612448177 2.18418713815684e-20 1.6475011556383e-18 "abundance" 1527 1176 -"935" "GGB51647_SGB4348" "diagnosis" "CD" "diagnosisCD" 0.566325660350745 0.610099357434979 0.314157927484776 0.451371022283274 0.00279713543683338 0.00688525645989755 "abundance" 1527 123 -"936" "GGB3278_SGB4328" "reads" "reads" "reads" -0.10132334617713 0.238323952190999 0.315428219830936 0.45286314588512 0.0106107809243939 0.0215066883995393 "abundance" 1527 179 -"937" "Phocaeicola_vulgatus" "diagnosis" "UC" "diagnosisUC" 0.405066443243954 0.261283099273066 0.317747704943596 0.454523437379053 0.0269886150932254 0.0477451907044933 "abundance" 1527 1288 -"938" "Veillonella_dispar" "age" "age" "age" -0.203162258161464 0.16334441110444 0.31730280719185 0.454523437379053 4.49063013095428e-16 1.39473688773168e-14 "abundance" 1527 526 -"939" "Prevotella_sp_885" "diagnosis" "UC" "diagnosisUC" 2.9394466185705 2.84882336320947 0.318716734416907 0.454910517933262 9.67035698682687e-05 0.000355815225717393 "abundance" 1527 69 -"940" "Ruminococcus_bicirculans" "diagnosis" "UC" "diagnosisUC" -0.238296752118999 0.244911366962762 0.330699474062553 0.469954016231439 5.61822257237387e-05 0.000221374740165179 "abundance" 1527 678 -"941" "Veillonella_parvula" "age" "age" "age" 0.170005885423015 0.158704011112634 0.337393948170456 0.478423639132852 1.04036658002882e-13 2.33750448619241e-12 "abundance" 1527 547 -"942" "GGB9453_SGB14844" "antibiotics" "Yes" "antibioticsYes" -0.698006233253002 0.631621731403353 0.337952310491094 0.478867885931543 0.054721051871044 0.0875536829936704 "abundance" 1527 222 -"943" "GGB9713_SGB15249" "diagnosis" "UC" "diagnosisUC" -0.385217423987576 0.435667801195637 0.340226037538632 0.481043181874447 3.15215442126236e-14 7.74110481128617e-13 "abundance" 1527 329 -"944" "Barnesiella_intestinihominis" "diagnosis" "CD" "diagnosisCD" -0.381154811257552 0.290032443943292 0.344751106551898 0.48673675014625 8.5278803173987e-05 0.00031934190124727 "abundance" 1527 431 -"945" "Eubacterium_siraeum" "age" "age" "age" 0.141844992283544 0.126983783209072 0.349440826476787 0.490785346360714 1.26004114554975e-08 1.03953394507854e-07 "abundance" 1527 565 -"946" "Clostridiaceae_bacterium_Marseille_Q4149" "diagnosis" "CD" "diagnosisCD" 0.47214846221581 0.563166380046689 0.35352841090971 0.495193200657759 0.000553103245020359 0.00163607010291737 "abundance" 1527 181 -"947" "Alistipes_communis" "diagnosis" "CD" "diagnosisCD" 0.132539118649147 0.143192175159332 0.354652291107727 0.496386700138692 0.0249258131754915 0.0447647257029236 "prevalence" 1527 407 -"948" "Clostridium_sp_AF34_10BH" "reads" "reads" "reads" -0.252666715559848 0.0925209905235961 0.356345127648371 0.497711493513164 2.91007580323345e-11 4.26811117807572e-10 "abundance" 1527 960 -"949" "Clostridium_sp_AF20_17LB" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.726820854706141 1.00472123581848 0.356616820496984 0.497735190893647 2.7304801768217e-09 2.57445273814617e-08 "abundance" 1527 654 -"950" "Alistipes_putredinis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.719156769512605 1.20696304211971 0.357688754326611 0.498519134061482 0.000423829950604438 0.00130485255929529 "abundance" 1527 873 -"951" "Eubacterium_rectale" "antibiotics" "Yes" "antibioticsYes" -0.36789635513493 0.27347019931962 0.359784470363727 0.500331360607941 5.31881381368739e-12 8.77604279258419e-11 "abundance" 1527 1211 -"952" "Roseburia_inulinivorans" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.309111290147742 0.754011240291159 0.361008317220112 0.501001599323933 1.37435359658915e-06 7.97427141757223e-06 "abundance" 1527 951 -"953" "Bacteroides_eggerthii" "antibiotics" "Yes" "antibioticsYes" -0.802107304666547 0.792764293373341 0.367315504759292 0.507591581541482 0.0293279729878964 0.0511597332561387 "abundance" 1527 409 -"954" "Coprococcus_comes" "diagnosis" "UC" "diagnosisUC" -0.130276746548901 0.144498075429518 0.367279387735626 0.507591581541482 7.66811789907549e-05 0.000291278147533227 "prevalence" 1527 759 -"955" "Collinsella_SGB14861" "diagnosis" "UC" "diagnosisUC" 0.385578724069721 0.283867071554501 0.370983645710603 0.511214417290915 3.70051508116117e-08 2.87334112184279e-07 "abundance" 1527 593 -"956" "Blautia_wexlerae" "age" "age" "age" -0.121587834758441 0.0687140378054221 0.371516234053758 0.511587541466556 2.26867619932168e-06 1.23490828169262e-05 "abundance" 1527 1302 -"957" "Phocaeicola_dorei" "reads" "reads" "reads" -0.518811526102892 0.196832544986499 0.372177421796855 0.511776694012002 5.12516549090151e-25 1.0824349516784e-22 "abundance" 1527 769 -"958" "Bacteroides_caecigallinarum" "diagnosis" "CD" "diagnosisCD" 6.72843879419347 7.46688230572593 0.377893359715174 0.517814603705084 0.00103013896618338 0.00284771400075823 "abundance" 1527 21 -"959" "Blautia_faecis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.870573379605359 0.483197851057551 0.379439660879494 0.519569094154542 0.0199130294926381 0.0365707115551753 "abundance" 1527 1125 -"960" "Firmicutes_bacterium_AF16_15" "reads" "reads" "reads" -0.25116327173284 0.0995156361137928 0.379797963762627 0.51969553304774 4.9879497865212e-09 4.50194442270631e-08 "abundance" 1527 827 -"961" "Clostridium_sp_AF34_10BH" "antibiotics" "Yes" "antibioticsYes" -0.436805908956185 0.380756705709935 0.381900939060468 0.521400777562489 3.00083989391354e-07 1.92053753210467e-06 "abundance" 1527 960 -"962" "GGB9480_SGB14874" "diagnosis" "UC" "diagnosisUC" -0.279221942495755 0.348535924057129 0.382111521734639 0.521400777562489 0.0037386358051889 0.00883221344581538 "abundance" 1527 332 -"963" "Lacrimispora_amygdalina" "antibiotics" "Yes" "antibioticsYes" -0.370036980537432 0.297615888116713 0.386195510129859 0.525505589689237 0.00854518984251916 0.0181929848260085 "abundance" 1527 865 -"964" "Bacteroides_xylanisolvens" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.527340755090165 1.06205219975394 0.387650411724669 0.526990098668166 0.00105516129666179 0.00289415669941519 "abundance" 1527 959 -"965" "Akkermansia_muciniphila" "diagnosis" "UC" "diagnosisUC" -0.355614058825799 0.456372844763588 0.390317702500948 0.529094406451388 7.70625272125847e-07 4.7039322969069e-06 "abundance" 1527 407 -"966" "Akkermansia_muciniphila" "reads" "reads" "reads" -0.481033342324506 0.16003718619592 0.390675892381448 0.529094406451388 0.00398477294498526 0.00928900713003187 "abundance" 1527 407 -"967" "Roseburia_inulinivorans" "diagnosis" "CD" "diagnosisCD" 0.148386746488927 0.19836648851442 0.39033386159241 0.529094406451388 7.83271175810289e-09 6.7797898496366e-08 "abundance" 1527 951 -"968" "Eubacterium_rectale" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.601823468178113 0.386128560849101 0.394173311417357 0.531916195103257 4.93549410291527e-23 6.51485221584816e-21 "abundance" 1527 1211 -"969" "Ruminococcus_bromii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.497892193208572 0.816018956606631 0.396470951590864 0.53391057161168 4.04906376768663e-05 0.000169633942165418 "abundance" 1527 429 -"970" "Oscillospiraceae_bacterium" "age" "age" "age" 0.226891189779452 0.263808718969215 0.401199207403861 0.53916317143545 1.86698396251755e-09 1.82549543001716e-08 "abundance" 1527 81 -"971" "Haemophilus_parainfluenzae" "reads" "reads" "reads" 0.04572912998405 0.0544621496204246 0.401104799637945 0.53916317143545 0.0198625445705377 0.0365415454119997 "prevalence" 1527 674 -"972" "Roseburia_faecis" "age" "age" "age" -0.124606897217956 0.0886814908720754 0.401540269141823 0.539250643232387 1.52162701501974e-07 1.04340138172782e-06 "abundance" 1527 922 -"973" "Parasutterella_excrementihominis" "antibiotics" "Yes" "antibioticsYes" -0.386004243017556 0.336470347035712 0.405439077652336 0.543366226154091 0.000728497009063615 0.00208480444870238 "abundance" 1527 699 -"974" "Ruminococcus_torques" "antibiotics" "Yes" "antibioticsYes" 0.174816040565956 0.247853026551329 0.407491967285788 0.545369386353719 0.00767725204957911 0.0165004173429209 "abundance" 1527 1093 -"975" "Bacteroides_xylanisolvens" "age" "age" "age" 0.121738194098876 0.12619622619017 0.413166223973191 0.551829666195226 1.14720918569321e-05 5.58273225848863e-05 "abundance" 1527 959 -"976" "GGB3746_SGB5089" "diagnosis" "CD" "diagnosisCD" -0.308594693746633 0.248328368569749 0.41525078969871 0.553856684690293 0.000115315609002757 0.000414194840499697 "abundance" 1527 651 -"977" "GGB9713_SGB15249" "age" "age" "age" -0.15023745158482 0.138435182520189 0.416266095087102 0.5544539535107 3.71460062233288e-12 6.2263781860056e-11 "abundance" 1527 329 -"978" "Bifidobacterium_longum" "age" "age" "age" -0.129143315552452 0.106273559079961 0.421873671470833 0.560776295274835 2.02222002747324e-29 7.11821449670581e-27 "abundance" 1527 843 -"979" "Faecalibacterium_prausnitzii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.0662388477040517 0.359919047185784 0.426091330962764 0.565613084715517 1.43339720838758e-09 1.455449473132e-08 "abundance" 1527 1374 -"980" "Faecalibacterium_SGB15315" "reads" "reads" "reads" -0.231290341659002 0.137902362827872 0.429596012931895 0.569878214031855 4.57442856203967e-09 4.16430738061542e-08 "abundance" 1527 619 -"981" "Collinsella_SGB14861" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.571425291452041 1.2291432768023 0.433127923005589 0.573007421498254 0.0326642798325978 0.056454139939809 "abundance" 1527 593 -"982" "Roseburia_hominis" "reads" "reads" "reads" -0.420942060579675 0.0979987908717678 0.435381866514542 0.575599571833163 2.21008188316433e-09 2.14114354919407e-08 "abundance" 1527 876 -"983" "Lachnospira_sp_NSJ_43" "diagnosis" "CD" "diagnosisCD" -0.402697935013216 0.401206973114788 0.436707000542725 0.576571269635463 1.78773197901108e-20 1.45218843833516e-18 "abundance" 1527 296 -"984" "Ruminococcus_lactaris" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.741372293227322 1.22234822143541 0.437441559546907 0.576811327493177 0.00270844668911544 0.00672969342048447 "abundance" 1527 379 -"985" "Roseburia_hominis" "antibiotics" "Yes" "antibioticsYes" 0.249047286768079 0.38254722094958 0.439051708120909 0.578494293774954 6.25742773507081e-05 0.000242045556345596 "abundance" 1527 876 -"986" "Roseburia_faecis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.582195325398 0.410859398947221 0.439939327191873 0.579273211140781 0.00127020938061971 0.00342178853554697 "abundance" 1527 922 -"987" "Fusicatenibacter_saccharivorans" "age" "age" "age" -0.106050137727707 0.0684975505583294 0.440511273895319 0.579635709893235 0.000456811724813188 0.0013861873028814 "abundance" 1527 1119 -"988" "Veillonella_dispar" "antibiotics" "Yes" "antibioticsYes" 0.350737909610425 0.527119236141694 0.440899639885826 0.579756323241524 0.0265923880339193 0.0471959021240652 "abundance" 1527 526 -"989" "Bacteroides_uniformis" "diagnosis" "UC" "diagnosisUC" 0.285618297930503 0.185985078742905 0.441859758497469 0.579799614792462 0.0195044265360597 0.0361980218314219 "abundance" 1527 1244 -"990" "Eisenbergiella_massiliensis" "diagnosis" "UC" "diagnosisUC" 0.446772884448835 0.444699186834557 0.441960417636161 0.579799614792462 0.015980976072942 0.0306277871742772 "abundance" 1527 417 -"991" "Dorea_longicatena" "diagnosis" "UC" "diagnosisUC" -0.123026084255428 0.160261100670381 0.442689029198673 0.58015718514702 0.00155841384307776 0.00403354171149537 "prevalence" 1527 1020 -"992" "Sutterella_wadsworthensis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.13717924106811 0.945565085274681 0.447218991062005 0.584916940117241 0.0213330713029316 0.0389079849670047 "abundance" 1527 536 -"993" "Clostridium_sp_AM22_11AC" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.0165686711095 0.795916315279133 0.455496118328134 0.591781526072588 0.00456736030204899 0.0104623264185764 "abundance" 1527 730 -"994" "Lacrimispora_celerecrescens" "reads" "reads" "reads" -0.404733347180177 0.081398851030776 0.463714042688519 0.599667266322545 1.12456560594294e-05 5.49787629572104e-05 "abundance" 1527 756 -"995" "Collinsella_aerofaciens" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.224178523276314 0.571764202963262 0.473143612667376 0.608638985616888 3.08763944807733e-08 2.45153929110501e-07 "abundance" 1527 698 -"996" "Flavonifractor_plautii" "reads" "reads" "reads" -0.286616113709158 0.0722194787319339 0.475668146604951 0.610249847180531 3.20391383314708e-15 8.67521284052131e-14 "abundance" 1527 1224 -"997" "Roseburia_inulinivorans" "age" "age" "age" -0.104308832803375 0.081621506674866 0.475521898233815 0.610249847180531 0.0221599011074791 0.040207655617694 "abundance" 1527 951 -"998" "Lachnospira_eligens" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.965450756849713 0.763315087306754 0.476286716591063 0.610271635553402 5.67260042131495e-06 2.92208099751638e-05 "abundance" 1527 929 -"999" "Coprococcus_eutactus" "age" "age" "age" -0.172004428088089 0.203997575885318 0.47884266364871 0.611941507370556 3.81300974182399e-18 1.67772428640256e-16 "abundance" 1527 177 -"1000" "GGB9453_SGB14844" "age" "age" "age" 0.132048287403424 0.174896197226355 0.47971341487473 0.612253437403804 4.87726567782064e-10 5.47914101678575e-09 "abundance" 1527 222 -"1001" "Phocaeicola_plebeius" "age" "age" "age" -0.205043826198091 0.257568883988357 0.481769324808392 0.614476018717753 0.000173360680632056 0.000602200259037667 "abundance" 1527 127 -"1002" "Bacteroides_thetaiotaomicron" "reads" "reads" "reads" -0.271311193436706 0.0981748070888735 0.488832264924053 0.621860837019271 6.76720730424126e-09 5.90592637461055e-08 "abundance" 1527 1062 -"1003" "GGB3746_SGB5089" "antibiotics" "Yes" "antibioticsYes" -0.453906500315017 0.52779119256824 0.489539398950136 0.622355228073238 6.74973445600449e-08 4.91566867968327e-07 "abundance" 1527 651 -"1004" "Bacteroides_stercoris" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.493891551003569 1.29627021529316 0.491744004786368 0.624345539540327 2.97779845893323e-07 1.91741169063017e-06 "abundance" 1527 826 -"1005" "Ruminococcus_bicirculans" "diagnosis" "CD" "diagnosisCD" 0.127261303409168 0.240208850436182 0.492680749063281 0.625128690694578 8.04170195744968e-11 1.11737332461406e-09 "abundance" 1527 678 -"1006" "Clostridium_sp_AF36_4" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.212482598684233 0.885873479654236 0.497819104253097 0.630829137296077 0.0389052695368909 0.0654779098311312 "abundance" 1527 568 -"1007" "Phocaeicola_sartorii" "reads" "reads" "reads" -0.24032275517376 0.148319954633865 0.498560197418292 0.631358798286029 1.08347420275714e-43 1.14414875811154e-40 "abundance" 1527 424 -"1008" "Acidaminococcus_intestini" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.372439074896268 0.852709518277094 0.501364141143411 0.6332520247974 0.00272477602766555 0.00673855617146329 "abundance" 1527 173 -"1009" "Clostridium_sp_1001270H_150608_G6" "reads" "reads" "reads" 0.0647461869101004 0.0970162141246535 0.50453268981021 0.636036694122033 0.0562747318956487 0.0896321521595852 "prevalence" 1527 141 -"1010" "Phascolarctobacterium_faecium" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.503953367664595 1.35179398996216 0.505085112834335 0.636278689527905 0.0057981290731106 0.0128630762630353 "abundance" 1527 503 -"1011" "Clostridium_sp_AF36_4" "age" "age" "age" 0.0761626879429011 0.0836889506428218 0.510442634891081 0.641830700500111 1.50813304712405e-05 7.0781711011689e-05 "abundance" 1527 568 -"1012" "Clostridium_sp_AT4" "age" "age" "age" -0.0376491658759323 0.0576909012087598 0.514013249472883 0.645075073519597 0.0135142387902334 0.0265754863361015 "prevalence" 1527 528 -"1013" "Bilophila_wadsworthia" "reads" "reads" "reads" -0.284749365163715 0.0851647614994447 0.522514258516207 0.651915663165008 8.37266747584101e-10 9.11498644792589e-09 "abundance" 1527 764 -"1014" "Enterocloster_bolteae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.132501259747353 0.208618245541916 0.525338776349198 0.654663245526998 1.01796571169895e-10 1.37238126202257e-09 "prevalence" 1527 866 -"1015" "Waltera_intestinalis" "diagnosis" "UC" "diagnosisUC" -0.177868741493702 0.34416023022074 0.529265505216186 0.659136263347627 2.92928616689519e-05 0.000128353783910428 "abundance" 1527 524 -"1016" "Dialister_invisus" "diagnosis" "UC" "diagnosisUC" 0.0925954348154485 0.14743843420642 0.529985731566163 0.659612814955594 0.0155920720428739 0.0299913079731783 "prevalence" 1527 726 -"1017" "Collinsella_SGB14861" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.738106676518818 0.817492407946793 0.536407972909958 0.664732660882221 2.07317702958967e-10 2.54566853865895e-09 "abundance" 1527 593 -"1018" "Enterocloster_bolteae" "diagnosis" "UC" "diagnosisUC" -0.136299872394427 0.271377483313512 0.537856907066918 0.666015460335081 1.02668673958128e-10 1.37238126202257e-09 "abundance" 1527 866 -"1019" "Phocaeicola_coprocola" "age" "age" "age" 0.231791521456782 0.381561941741816 0.538276310246363 0.666112672717792 0.00651988092955542 0.0143437380450219 "abundance" 1527 101 -"1020" "Tyzzerella_nexilis" "age" "age" "age" -0.145550831510805 0.196924163134201 0.541080114810564 0.668312607041619 0.0505076464853215 0.0824545233645662 "abundance" 1527 188 -"1021" "Candidatus_Cibionibacter_quicibialis" "diagnosis" "UC" "diagnosisUC" 0.255736454356222 0.222572520064341 0.54250694495533 0.66965165536495 0.000173217179042973 0.000602200259037667 "abundance" 1527 933 -"1022" "GGB16040_SGB9347" "diagnosis" "CD" "diagnosisCD" 0.420981415698367 0.795210596667921 0.5440999087721 0.671193953119119 0.0194637690250078 0.0361861621310004 "abundance" 1527 114 -"1023" "Bacteroides_caccae" "age" "age" "age" -0.0855990374181257 0.0698031211066372 0.546619119763422 0.673876189285632 0.0154292919282949 0.0297455042124643 "abundance" 1527 958 -"1024" "Lacrimispora_amygdalina" "diagnosis" "UC" "diagnosisUC" -0.0930645341887249 0.15476763706502 0.547628339730052 0.674694688418993 0.00251217555704128 0.00627153046864207 "prevalence" 1527 865 -"1025" "Lacrimispora_celerecrescens" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.797896515577419 0.630903501130393 0.553447217272383 0.680576376683598 0.00140103162536903 0.00370799347466088 "abundance" 1527 756 -"1026" "Clostridium_leptum" "diagnosis" "UC" "diagnosisUC" -0.117803314219657 0.25714453643051 0.559910125064144 0.687226372095061 0.016809152047811 0.0319252959756986 "abundance" 1527 652 -"1027" "Waltera_intestinalis" "antibiotics" "Yes" "antibioticsYes" 0.295836101342134 0.623993345910793 0.566172718673783 0.693605951278102 0.00649687683279211 0.0143229685499551 "abundance" 1527 524 -"1028" "Proteus_mirabilis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.355229005919498 1.31635514472236 0.567755475623382 0.695109147473739 0.000106584859353541 0.00038678217002522 "abundance" 1527 100 -"1029" "Bilophila_wadsworthia" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.812120285129269 2.26345578753337 0.591166517543058 0.71481396985095 0.00175675773153469 0.00450275768082679 "abundance" 1527 764 -"1030" "Roseburia_faecis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.060574746033101 0.851848619996626 0.592963265278594 0.716543117102271 0.00942059469030667 0.0196603715275965 "abundance" 1527 922 -"1031" "Parasutterella_SGB9260" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.130419996543303 0.998455722217896 0.598296872970929 0.721649438139009 0.0455690869963576 0.0755431018338361 "abundance" 1527 269 -"1032" "Veillonella_rogosae" "age" "age" "age" 0.137390181548123 0.264760375128577 0.599728767939851 0.722484594669832 1.28260716142734e-05 6.18462631263593e-05 "abundance" 1527 207 -"1033" "Anaerostipes_hadrus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.0260176343282094 0.409807897735397 0.60653344234558 0.72978223296999 5.88932656925177e-17 2.00617059907415e-15 "abundance" 1527 1128 -"1034" "Proteus_mirabilis" "age" "age" "age" 0.274574714679921 0.55081934991385 0.610053585522144 0.732214192942426 0.00493925085621435 0.0111449762909452 "abundance" 1527 100 -"1035" "Faecalibacterium_prausnitzii" "antibiotics" "Yes" "antibioticsYes" -0.201371075134203 0.185788901631579 0.61059008990468 0.732408247804631 0.000589626649579048 0.00172957150543187 "abundance" 1527 1374 -"1036" "Waltera_intestinalis" "diagnosis" "CD" "diagnosisCD" -0.254922761478036 0.332823027336674 0.610984628539372 0.7324318798564 7.98799200426177e-09 6.85798337926864e-08 "abundance" 1527 524 -"1037" "Clostridiaceae_bacterium" "reads" "reads" "reads" -0.303511116624222 0.0709582341424638 0.614142425547133 0.735315134509251 2.72553793984456e-11 4.05375783728993e-10 "abundance" 1527 1109 -"1038" "Oscillibacter_sp_ER4" "age" "age" "age" -0.0810614883103598 0.0962852503133065 0.615274731095737 0.735779257053333 3.5106703771254e-11 5.07844920307455e-10 "abundance" 1527 458 -"1039" "Dysosmobacter_sp_BX15" "age" "age" "age" 0.0536275616909017 0.0813286663567586 0.62190997932232 0.740982987558423 0.0508360434857222 0.0828294383899496 "abundance" 1527 621 -"1040" "Phocaeicola_dorei" "diagnosis" "UC" "diagnosisUC" -0.192256003965362 0.505720157207512 0.625148321611947 0.744387459128424 0.0234675096141935 0.0422895736392292 "abundance" 1527 769 -"1041" "GGB16040_SGB9347" "reads" "reads" "reads" -0.223800166685805 0.241845853993018 0.626782604221682 0.745878933403877 0.00859623819383635 0.0182281677363277 "abundance" 1527 114 -"1042" "Escherichia_coli" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.719350786500662 0.619280491847966 0.628710986416319 0.746809281129171 0.0100766303547082 0.0206287496292087 "abundance" 1527 707 -"1043" "Dysgonomonas_mossii" "reads" "reads" "reads" -0.664481978451737 0.66730725478326 0.632472496277504 0.749466385498151 0.0431089864932009 0.0718029806574451 "abundance" 1527 31 -"1044" "Bacteroides_thetaiotaomicron" "antibiotics" "Yes" "antibioticsYes" -0.0976413945472647 0.204169825175959 0.63248212368805 0.749466385498151 0.0106743329306982 0.0215527640053869 "prevalence" 1527 1062 -"1045" "Ruminococcus_bromii" "diagnosis" "UC" "diagnosisUC" -0.111305079880547 0.334347999446315 0.635576951426125 0.752221298053694 9.23974775305428e-10 9.75717362722532e-09 "abundance" 1527 429 -"1046" "Clostridium_fessum" "reads" "reads" "reads" -0.380815460316237 0.0782020612349218 0.637117453644426 0.753588077736808 2.48356378859811e-10 2.94679029298832e-09 "abundance" 1527 926 -"1047" "Vescimonas_coprocola" "diagnosis" "UC" "diagnosisUC" -0.0765046149126976 0.256108956992886 0.646879821563787 0.762826295314206 1.11040607573464e-13 2.44289336661621e-12 "abundance" 1527 599 -"1048" "Firmicutes_bacterium_AF16_15" "diagnosis" "CD" "diagnosisCD" 0.0485431372646013 0.206823386498583 0.649450525390963 0.763553746458449 3.38180894135542e-13 6.61331526309504e-12 "abundance" 1527 827 -"1049" "GGB3304_SGB4367" "diagnosis" "CD" "diagnosisCD" 0.170128446639766 0.504985719203485 0.649103457922034 0.763553746458449 0.0112163627371538 0.0225180210084304 "abundance" 1527 155 -"1050" "Clostridiaceae_bacterium" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.109715352152068 0.639089186252863 0.66037376200036 0.772287575113954 5.71890189621809e-06 2.93163126330403e-05 "abundance" 1527 1109 -"1051" "Ruminococcus_lactaris" "reads" "reads" "reads" -0.28564238139322 0.126756437898661 0.662515403957131 0.77425544218435 0.00137688964260975 0.00365325493114547 "abundance" 1527 379 -"1052" "GGB3175_SGB4191" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.694680918805379 2.15148529729637 0.671669796266277 0.782147069072888 0.0261854928532953 0.0465519872947472 "abundance" 1527 154 -"1053" "Roseburia_inulinivorans" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.00757344162253355 0.466280244320755 0.672118970823026 0.782203972000115 5.57419239994225e-05 0.00022046244098648 "abundance" 1527 951 -"1054" "Alistipes_shahii" "diagnosis" "CD" "diagnosisCD" -0.17058353894824 0.186092442094295 0.675876278407224 0.783310941878835 1.10352609303293e-10 1.43867105462071e-09 "abundance" 1527 673 -"1055" "Bifidobacterium_adolescentis" "age" "age" "age" 0.0640522140919381 0.151025694691237 0.679829256356359 0.78602743604753 0.000508369581235354 0.0015164923101258 "abundance" 1527 427 -"1056" "Anaerostipes_hadrus" "antibiotics" "Yes" "antibioticsYes" -0.209455552991655 0.290043755683384 0.682205094032492 0.788307956084854 1.04093262097725e-10 1.37403105968997e-09 "abundance" 1527 1128 -"1057" "Clostridium_fessum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.768233499356963 0.88206314451912 0.685577179366406 0.78986899085021 5.95950237301376e-05 0.000233082759477872 "abundance" 1527 926 -"1058" "Bacteroides_cellulosilyticus" "reads" "reads" "reads" -0.281491019573072 0.148828167205976 0.687278880868568 0.790896898243334 0.0358469706311397 0.0610554854620702 "abundance" 1527 433 -"1059" "Ruminococcus_gnavus" "diagnosis" "CD" "diagnosisCD" 0.0516347391495031 0.265668510224433 0.693253539833222 0.795897424696895 0.0530582968119712 0.0854109168192708 "abundance" 1527 767 -"1060" "Vescimonas_coprocola" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.55040254145698 0.823811044489415 0.695014417110262 0.797450482110072 2.28949645466474e-05 0.000103320865646409 "abundance" 1527 599 -"1061" "Veillonella_rogosae" "reads" "reads" "reads" 0.0303678116610193 0.0777817209975112 0.696223414274564 0.798144278368627 0.00463983562827457 0.0106053385789133 "prevalence" 1527 207 -"1062" "GGB3175_SGB4191" "age" "age" "age" -0.118219158748309 0.264250567958447 0.70350014299463 0.80341278749942 0.00995647002054879 0.0205352194173819 "abundance" 1527 154 -"1063" "Haemophilus_parainfluenzae" "diagnosis" "CD" "diagnosisCD" -0.183705533159397 0.262537900870584 0.70565633192075 0.804934309733302 0.00351492533123133 0.00839764966013639 "abundance" 1527 674 -"1064" "Ruminococcus_torques" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.367276057895645 0.337711723308195 0.715387437244765 0.811769484539066 0.0002918584112017 0.000966151981909076 "abundance" 1527 1093 -"1065" "Dialister_invisus" "reads" "reads" "reads" -0.30977158640868 0.0880108373753003 0.726884466362687 0.820527005934542 0.0106371605934135 0.0215188536142617 "abundance" 1527 726 -"1066" "Parasutterella_excrementihominis" "reads" "reads" "reads" -0.37777292381325 0.101551168266771 0.732317585946003 0.823330588572204 0.000474166919899569 0.00143062933546841 "abundance" 1527 699 -"1067" "Ruminococcus_bromii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.989867646516389 1.7077915537331 0.731737930343756 0.823330588572204 0.0581270782621667 0.0920272783281081 "abundance" 1527 429 -"1068" "Ruminococcus_bromii" "age" "age" "age" 0.041400209428922 0.115421050266393 0.733362542854155 0.824031287370339 4.82832777539553e-07 3.03494888739147e-06 "abundance" 1527 429 -"1069" "Prevotella_copri_clade_A" "reads" "reads" "reads" -0.427155149112215 0.253989788350063 0.737304943346798 0.827034362399336 1.82190059048702e-09 1.79806263883579e-08 "abundance" 1527 289 -"1070" "Bacteroides_eggerthii" "diagnosis" "UC" "diagnosisUC" 0.27848839875074 0.586947483398683 0.738350052210606 0.827731498576892 0.00515331265993169 0.0115785067423146 "abundance" 1527 409 -"1071" "GGB16040_SGB9347" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.877170828806685 1.9872722932362 0.740286855824368 0.828636954141075 0.0269923095175971 0.0477451907044933 "abundance" 1527 114 -"1072" "Clostridium_sp_AF36_4" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.464919024395624 0.722791435321135 0.742121778832372 0.829105749478819 1.6321369214567e-06 9.36704667966454e-06 "abundance" 1527 568 -"1073" "Flavonifractor_plautii" "age" "age" "age" 0.0301790394646403 0.0736007210489943 0.744492819948142 0.830804666007235 1.41555867072804e-10 1.77955947177239e-09 "abundance" 1527 1224 -"1074" "GGB3175_SGB4191" "diagnosis" "UC" "diagnosisUC" 0.350065484158174 0.845686469658257 0.748407108034491 0.834696055422029 4.27188076959914e-10 4.90337618771379e-09 "abundance" 1527 154 -"1075" "Roseburia_intestinalis" "diagnosis" "CD" "diagnosisCD" -0.16912372385162 0.273279203285783 0.748900376288397 0.83476972918855 0.00142891041086188 0.00376404562906243 "abundance" 1527 842 -"1076" "Firmicutes_bacterium_AF16_15" "antibiotics" "Yes" "antibioticsYes" -0.206029015871053 0.392931804216462 0.752946416205297 0.83784584126717 6.81907933215873e-05 0.000260903904882595 "abundance" 1527 827 -"1077" "Clostridium_sp_AM49_4BH" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.340620346153377 1.81765753855913 0.758374003245763 0.84292537107066 0.00795081290132067 0.0170305444701716 "abundance" 1527 344 -"1078" "Clostridium_leptum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.705947144091955 0.973465788148615 0.759626877248579 0.843824537647753 0.00339103429717191 0.00817564433290761 "abundance" 1527 652 -"1079" "Eubacterium_ventriosum" "reads" "reads" "reads" -0.305288817062464 0.117438351446847 0.76004666645857 0.843824537647753 0.00859478645727681 0.0182281677363277 "abundance" 1527 520 -"1080" "Waltera_intestinalis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.06243599326144 2.22601414760552 0.767262207983206 0.848941310531814 0.00362924436974928 0.00863073459032252 "abundance" 1527 524 -"1081" "Lacrimispora_amygdalina" "reads" "reads" "reads" -0.31796834811849 0.0770466816250928 0.768567190131149 0.849903955583624 2.23340956216223e-07 1.4833210677002e-06 "abundance" 1527 865 -"1082" "Ruthenibacterium_lactatiformans" "antibiotics" "Yes" "antibioticsYes" -0.178304390773983 0.322817205919828 0.77073185571222 0.851815636912714 0.027566057816363 0.048516261756799 "abundance" 1527 797 -"1083" "Phocaeicola_dorei" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.0660729385986633 0.997553494011896 0.779191439595399 0.858252577773061 0.000448200350627406 0.00136791783312873 "abundance" 1527 769 -"1084" "Phocaeicola_massiliensis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.0914806511538287 1.76790454193785 0.781350457413657 0.860145799316217 0.00346645394170257 0.00830062440462113 "abundance" 1527 396 -"1085" "Alistipes_shahii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.79425862012513 1.44659240884184 0.788000957982785 0.865807902065088 0.00142933929664208 0.00376404562906243 "abundance" 1527 673 -"1086" "Ruminococcus_torques" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.21270841820197 0.685775145222172 0.7884357625218 0.865807902065088 2.16284270332316e-06 1.18956348682774e-05 "abundance" 1527 1093 -"1087" "Clostridiaceae_bacterium" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.106403327448912 0.356839967070533 0.792630721164941 0.868340512287705 6.59934376799586e-12 1.05589500287934e-10 "abundance" 1527 1109 -"1088" "Blautia_wexlerae" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.546367109265639 0.508346124790324 0.795994745413471 0.869396856056931 1.32918335547268e-06 7.75479349933229e-06 "abundance" 1527 1302 -"1089" "Fusicatenibacter_saccharivorans" "antibiotics" "Yes" "antibioticsYes" -0.153548843940413 0.2686780678305 0.797239057992351 0.8697870204266 1.51480578230384e-08 1.24002705900221e-07 "abundance" 1527 1119 -"1090" "Bacteroides_fragilis" "age" "age" "age" -0.0490793624573853 0.112911840187518 0.800821148867599 0.870529033120571 0.012025335982537 0.0239599147123756 "abundance" 1527 787 -"1091" "Coprococcus_eutactus" "reads" "reads" "reads" 0.0222577346052306 0.0883072101694023 0.801003271948323 0.870529033120571 0.0177622185030961 0.033554387726779 "prevalence" 1527 177 -"1092" "GGB3278_SGB4328" "age" "age" "age" 0.0199600311928235 0.0786504471588684 0.799664339621696 0.870529033120571 0.00328710005333441 0.00794536465955607 "prevalence" 1527 179 -"1093" "Parabacteroides_distasonis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.118530349679738 0.333627660410167 0.807193250953468 0.875766580990048 1.61725054674869e-18 8.13245989222198e-17 "abundance" 1527 1140 -"1094" "GGB9480_SGB14874" "antibiotics" "Yes" "antibioticsYes" -0.200741674320702 0.501953575363184 0.807827557242683 0.875968394479579 0.0454474011860175 0.0754598359315008 "abundance" 1527 332 -"1095" "Bifidobacterium_longum" "diagnosis" "UC" "diagnosisUC" 0.00132619402039969 0.244116426493603 0.825222941489371 0.890876037386868 0.00159180188081819 0.00410988456269929 "abundance" 1527 843 -"1096" "Clostridium_fessum" "diagnosis" "UC" "diagnosisUC" 0.0143069620324046 0.18912983749492 0.833499828767982 0.895851851162067 2.50861518403682e-09 2.40827057667535e-08 "abundance" 1527 926 -"1097" "Oscillospiraceae_bacterium" "reads" "reads" "reads" -0.283308591895949 0.286616317888454 0.838186522699408 0.899899156788266 0.0363538433555989 0.061819095947685 "abundance" 1527 81 -"1098" "Roseburia_intestinalis" "reads" "reads" "reads" -0.317357582340671 0.118055227720415 0.838135130169146 0.899899156788266 0.0227029532285806 0.0411223303762969 "abundance" 1527 842 -"1099" "Clostridiaceae_bacterium" "antibiotics" "Yes" "antibioticsYes" -0.0143720187620967 0.253544291098084 0.849315311265783 0.91084638760337 0.00762655069289624 0.0164359949626499 "abundance" 1527 1109 -"1100" "Alistipes_onderdonkii" "diagnosis" "CD" "diagnosisCD" -0.121015960302164 0.230039678802752 0.850416999956428 0.911289623468041 7.60554717040635e-06 3.8612777942063e-05 "abundance" 1527 831 -"1101" "Ruminococcus_gnavus" "antibiotics" "Yes" "antibioticsYes" -0.137090110933387 0.303999264424169 0.85149355829676 0.911289623468041 0.015193689180121 0.0294395151820327 "abundance" 1527 767 -"1102" "Bacteroides_caccae" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.543046275647542 0.775883343593131 0.861299464158776 0.918656742885506 3.03224134529812e-06 1.60906877418835e-05 "abundance" 1527 958 -"1103" "Oscillibacter_sp_ER4" "diagnosis" "UC" "diagnosisUC" 0.13079891306242 0.266531863419685 0.861003445252252 0.918656742885506 1.2340775472217e-06 7.25566929489219e-06 "abundance" 1527 458 -"1104" "Ruminococcus_lactaris" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.0150958219429144 2.40522080367539 0.862584581555387 0.919525516835366 0.00705581611649268 0.0153307488421677 "abundance" 1527 379 -"1105" "Clostridium_sp_AM49_4BH" "diagnosis" "UC" "diagnosisUC" 0.135657382124954 0.357399426300144 0.876776205691764 0.931098209740058 5.02369888756548e-20 3.5366840168461e-18 "abundance" 1527 344 -"1106" "Clostridiaceae_bacterium_Marseille_Q4149" "reads" "reads" "reads" -0.375537216584567 0.232007327170479 0.88510094757896 0.937391464265196 0.0389395145586652 0.0654779098311312 "abundance" 1527 181 -"1107" "Alistipes_onderdonkii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.782053047259514 2.79551051792812 0.892094153828011 0.939198263243499 0.000681189136057081 0.00196539816304994 "abundance" 1527 831 -"1108" "Bacteroides_fragilis" "reads" "reads" "reads" -0.35747819508664 0.108252456401924 0.889002087495247 0.939198263243499 0.00118062051053409 0.00318858122538107 "abundance" 1527 787 -"1109" "Roseburia_sp_AF02_12" "reads" "reads" "reads" -0.318171378238208 0.174041721240826 0.891988803768242 0.939198263243499 2.33267586995721e-05 0.000103936950155055 "abundance" 1527 363 -"1110" "Clostridiales_bacterium" "age" "age" "age" -0.0271599848445878 0.0766109846099001 0.897828739596412 0.942696054363992 1.00946383700426e-05 5.00466578345776e-05 "abundance" 1527 985 -"1111" "Eubacterium_ventriosum" "diagnosis" "CD" "diagnosisCD" -0.0286843587298497 0.27299720798148 0.897434936111436 0.942696054363992 1.23766324916208e-08 1.02911211898831e-07 "abundance" 1527 520 -"1112" "Dialister_invisus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.271339673164679 0.374355880936453 0.903137817396489 0.94591587118832 0.0512735977001661 0.0831719188500391 "abundance" 1527 726 -"1113" "Bacteroides_faecis" "age" "age" "age" 0.0073763882734909 0.0599893094000828 0.90213741606237 0.94591587118832 0.00133813890139643 0.00358648395907267 "prevalence" 1527 434 -"1114" "GGB9708_SGB15234" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.0146791234712372 1.66495764153281 0.903903001956861 0.946023816723999 6.07036094353778e-05 0.000235672836631467 "abundance" 1527 282 -"1115" "Alistipes_finegoldii" "diagnosis" "CD" "diagnosisCD" -0.0369087389917938 0.229120410162151 0.907747524520684 0.94801638851599 0.0282217736050048 0.0494232055172223 "abundance" 1527 639 -"1116" "Clostridium_sp_AF36_4" "diagnosis" "UC" "diagnosisUC" 0.106511147649825 0.230554456776405 0.911378637796851 0.950556056551716 1.25706623068146e-07 8.84974626399746e-07 "abundance" 1527 568 -"1117" "Bacteroides_caccae" "diagnosis" "UC" "diagnosisUC" 0.102913144798996 0.188440819729656 0.912304511203933 0.950742941275992 0.0393893339675128 0.06612899311557 "abundance" 1527 958 -"1118" "Akkermansia_muciniphila" "antibiotics" "Yes" "antibioticsYes" -0.145020146761192 0.710052890548739 0.92048426649509 0.956716094006067 0.000973499412285599 0.00271961740575024 "abundance" 1527 407 -"1119" "Ruminococcus_bicirculans" "reads" "reads" "reads" -0.353006888505678 0.108263864318466 0.920273911202381 0.956716094006067 3.67735915359591e-05 0.00015721826988653 "abundance" 1527 678 -"1120" "Phocaeicola_sartorii" "antibiotics" "Yes" "antibioticsYes" -0.117452569681855 0.446315080474444 0.924545622071121 0.959406343880494 0.00704983231818668 0.0153307488421677 "abundance" 1527 424 -"1121" "Clostridium_sp_AM22_11AC" "reads" "reads" "reads" -0.351303926591622 0.100215385438372 0.927737149046365 0.961696758215702 7.24150026629803e-10 7.96565029292783e-09 "abundance" 1527 730 -"1122" "Proteus_mirabilis" "antibiotics" "Yes" "antibioticsYes" -0.030360467478515 0.341769867343877 0.929214573356534 0.962717537825381 0.009516503262221 0.0198213559071112 "prevalence" 1527 100 -"1123" "Clostridium_leptum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.119676832578604 1.14206592854268 0.931888295093426 0.963406325203994 2.72772458048866e-08 2.18217966439092e-07 "abundance" 1527 652 -"1124" "Faecalibacterium_SGB15346" "age" "age" "age" -0.0229242659607681 0.0994154948365055 0.932056720205144 0.963406325203994 0.036519185035181 0.0620004170372205 "abundance" 1527 743 -"1125" "GGB9480_SGB14874" "reads" "reads" "reads" -0.3310359380185 0.125346083165293 0.931684948610272 0.963406325203994 0.0188097604845888 0.0352182749498683 "abundance" 1527 332 -"1126" "Tyzzerella_nexilis" "reads" "reads" "reads" 0.00685417499192598 0.0802624823319651 0.931945780202914 0.963406325203994 0.0440479660883677 0.0732514207705768 "prevalence" 1527 188 -"1127" "Veillonella_dispar" "reads" "reads" "reads" 0.00484758565500632 0.0571007356128399 0.932344606428225 0.963406325203994 0.00135210908012502 0.00361475237623296 "prevalence" 1527 526 -"1128" "Ruminococcus_bromii" "reads" "reads" "reads" -0.352448680552171 0.125233914148484 0.934109935763373 0.964720303637226 0.0323447270760674 0.05599349474152 "abundance" 1527 429 -"1129" "Bifidobacterium_longum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.461584842481971 0.819377444631858 0.944816967571267 0.970232774439411 2.81305773711613e-06 1.50029745979527e-05 "abundance" 1527 843 -"1130" "Candidatus_Cibionibacter_quicibialis" "reads" "reads" "reads" -0.348241731084129 0.087276584871975 0.944909401104504 0.970232774439411 1.01782293703705e-06 6.07243514978034e-06 "abundance" 1527 933 -"1131" "GGB3278_SGB4328" "antibiotics" "Yes" "antibioticsYes" 0.0294065683677828 1.55929390426584 0.948218241203555 0.97213744474542 0.00830871028010338 0.0177611296675894 "abundance" 1527 179 -"1132" "Dysosmobacter_sp_BX15" "diagnosis" "CD" "diagnosisCD" -0.0537400545901098 0.194439183326374 0.951583759251912 0.973697818343111 0.000432211010165397 0.00132678728701936 "abundance" 1527 621 -"1133" "Dysosmobacter_welbionis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.369611457754359 0.556756296690678 0.954192357025876 0.973697818343111 9.00470122983415e-10 9.60501464515643e-09 "abundance" 1527 1191 -"1134" "Roseburia_faecis" "reads" "reads" "reads" -0.336062161151159 0.0958596750985624 0.952601680069244 0.973697818343111 8.94231894618965e-05 0.000331336449374606 "abundance" 1527 922 -"1135" "Clostridium_sp_AM49_4BH" "antibiotics" "Yes" "antibioticsYes" -0.118223616393049 0.82910441250851 0.956795362326706 0.975387823258653 0.00447023445249914 0.0103069161175526 "abundance" 1527 344 -"1136" "Clostridiales_bacterium" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.431411691002504 0.713377935755325 0.969963366896388 0.984575802034048 0.000113159920435507 0.000407839167166879 "abundance" 1527 985 -"1137" "GGB9453_SGB14844" "reads" "reads" "reads" 0.00265447091850849 0.0747967580877779 0.971689724078076 0.985304473714873 0.0097306055031355 0.020187660925955 "prevalence" 1527 222 -"1138" "Ruthenibacterium_lactatiformans" "age" "age" "age" -0.00639161621432833 0.0959384733747123 0.974450735793846 0.986456741542597 0.00049376349319861 0.00148129047959583 "abundance" 1527 797 -"1139" "Dorea_longicatena" "age" "age" "age" 0.00183460691316255 0.0581827450462006 0.974845428822291 0.986456741542597 0.0627052348366188 0.097953739626434 "prevalence" 1527 1020 -"1140" "Odoribacter_splanchnicus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.435062370230235 1.26569650247248 0.980282175959534 0.990351389903266 0.00154695025014315 0.00401370875712818 "abundance" 1527 757 -"1141" "Alistipes_communis" "antibiotics" "Yes" "antibioticsYes" -0.0776616300534455 0.484682919148901 0.992104606972957 0.9977212568323 0.00153573432019668 0.00399442227125048 "abundance" 1527 407 -"1142" "Dorea_longicatena" "antibiotics" "Yes" "antibioticsYes" -0.0691249534609105 0.274348340910798 0.99124498998508 0.9977212568323 2.40372386716661e-06 1.30170892498869e-05 "abundance" 1527 1020 -"1143" "Lachnospira_sp_NSJ_43" "reads" "reads" "reads" 0.000840132705193556 0.0734764293746029 0.990877151838764 0.9977212568323 0.0549179930581225 0.0877358557781806 "prevalence" 1527 296 -"1144" "Acidaminococcus_intestini" "diagnosis" "CD" "diagnosisCD" -0.070412467846994 0.5243305446312 0.997720221684156 1 4.46907381039028e-05 0.000182920230378765 "abundance" 1527 173 -"1145" "Bacteroides_xylanisolvens" "diagnosis" "CD" "diagnosisCD" -0.0686055837521586 0.284139918435159 0.999363903820648 1 0.00117044375123687 0.00317235770359829 "abundance" 1527 959 -"1146" "Blautia_obeum" "reads" "reads" "reads" -0.342059763368912 0.0890453651171258 0.999083166228402 1 5.65328327095498e-12 9.18441097558225e-11 "abundance" 1527 899 -"1147" "Dialister_invisus" "diagnosis" "CD" "diagnosisCD" -0.0691179090086256 0.215805230189702 0.999228428341649 1 0.00152319961400621 0.00397160195651991 "abundance" 1527 726 -"1148" "Eubacterium_ventriosum" "diagnosis" "UC" "diagnosisUC" 0.0724274406349542 0.274207648098216 1 1 0.0144582042327432 0.0282215594635431 "abundance" 1527 520 -"1149" "Faecalibacterium_SGB15346" "antibiotics" "Yes" "antibioticsYes" -0.0726334212119533 0.382225417907357 1 1 0.0294824518162531 0.0512907234233332 "abundance" 1527 743 -"1150" "Roseburia_hominis" "diagnosis" "UC" "diagnosisUC" 0.0713314243342626 0.231297547780313 0.99713766663187 1 1.39338587636345e-10 1.77278974149374e-09 "abundance" 1527 876 +"Phocaeicola_sartorii" "reads" "reads" "reads" 1.09514373725997 0.0787239668301347 5.41737101378567e-44 1.05855429609372e-40 1.08347420275714e-43 1.14414875811154e-40 "prevalence" 1527 424 +"Faecalibacterium_prausnitzii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.49194163836917 0.282163617540849 3.54275099714693e-35 3.46126772421255e-32 7.08550199429391e-35 3.74114505298719e-32 "prevalence" 1527 1374 +"Bifidobacterium_longum" "age" "age" "age" -0.672428387468092 0.0593867641608605 1.01111001373663e-29 4.93927241710342e-27 2.02222002747324e-29 7.11821449670581e-27 "prevalence" 1527 843 +"Clostridium_sp_AM49_4BH" "diagnosis" "CD" "diagnosisCD" -1.81049294555846 0.162948238658055 1.11100671030317e-28 4.34181422386478e-26 2.22201342060633e-28 5.86611543040072e-26 "prevalence" 1527 344 +"Phocaeicola_dorei" "reads" "reads" "reads" 0.65950022958877 0.0634326812084893 2.56258274545074e-25 8.34547780768459e-23 5.12516549090151e-25 1.0824349516784e-22 "prevalence" 1527 769 +"GGB16040_SGB9347" "age" "age" "age" 0.959785431885208 0.0943561467875372 2.64574976490589e-24 7.38542148660872e-22 5.2914995298118e-24 9.31303917246876e-22 "prevalence" 1527 114 +"Firmicutes_bacterium_AF16_15" "diagnosis" "UC" "diagnosisUC" -1.67302568460685 0.165975284149971 6.77476366502364e-24 1.65473602518202e-21 1.35495273300473e-23 2.0440429800757e-21 "prevalence" 1527 827 +"Eubacterium_rectale" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.36034123205341 0.237168802828556 2.46774705145763e-23 5.35775304283134e-21 4.93549410291527e-23 6.51485221584816e-21 "prevalence" 1527 1211 +"Phascolarctobacterium_faecium" "age" "age" "age" 0.573582942756144 0.05778324700496 3.19401931541863e-23 6.24111374232801e-21 6.38803863083726e-23 7.49529866018239e-21 "prevalence" 1527 503 +"Dysosmobacter_welbionis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.39540766502285 0.241667222753396 3.69147814631094e-23 6.55740754353779e-21 7.38295629262187e-23 7.7964018450087e-21 "prevalence" 1527 1191 +"Blautia_faecis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.41789548597885 0.248936141086085 2.65630578460566e-22 4.32535125259955e-20 5.31261156921132e-22 5.10010710644287e-20 "prevalence" 1527 1125 +"Fusicatenibacter_saccharivorans" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.34982606021717 0.243286566702391 4.51664499955289e-22 6.78886486855873e-20 9.03328999910582e-22 7.94929519921312e-20 "prevalence" 1527 1119 +"Lachnospira_sp_NSJ_43" "diagnosis" "CD" "diagnosisCD" -1.65444063973956 0.176984858163163 8.93865989505542e-21 1.16440942899589e-18 1.78773197901108e-20 1.45218843833516e-18 "prevalence" 1527 296 +"Bacteroides_ovatus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.12944188701312 0.228316539484205 1.09209356907842e-20 1.33371927123702e-18 2.18418713815684e-20 1.6475011556383e-18 "prevalence" 1527 1176 +"Clostridium_sp_AM49_4BH" "diagnosis" "UC" "diagnosisUC" -1.56682180970953 0.16960646406172 2.51184944378274e-20 2.8871493018538e-18 5.02369888756548e-20 3.5366840168461e-18 "prevalence" 1527 344 +"Bacteroides_faecis" "reads" "reads" "reads" 0.599573256652432 0.0657369505860103 7.4575174133567e-20 8.09554945872166e-18 1.49150348267135e-19 9.84392298563089e-18 "prevalence" 1527 434 +"Dysosmobacter_welbionis" "reads" "reads" "reads" 0.719033593058648 0.0798212170207683 2.09750839877172e-19 2.04926570559997e-17 4.19501679754345e-19 2.6058457283564e-17 "prevalence" 1527 1191 +"Roseburia_sp_AF02_12" "diagnosis" "CD" "diagnosisCD" -1.38133207948781 0.153624019305375 2.43565459307431e-19 2.26631860707962e-17 4.87130918614863e-19 2.85783472254053e-17 "prevalence" 1527 363 +"Clostridiales_bacterium" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.46290899961471 0.275191886061891 3.56166187811641e-19 3.1634033226543e-17 7.12332375623282e-19 3.95906836135887e-17 "prevalence" 1527 985 +"Alistipes_putredinis" "diagnosis" "UC" "diagnosisUC" -1.41881124867536 0.159222447352137 5.06315949565022e-19 4.30148419760892e-17 1.01263189913004e-18 5.34669642740663e-17 "prevalence" 1527 873 +"Parabacteroides_distasonis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.99483627501521 0.225180696004265 8.08625273374346e-19 6.32021513669389e-17 1.61725054674869e-18 8.13245989222198e-17 "prevalence" 1527 1140 +"Clostridium_sp_AT4" "diagnosis" "UC" "diagnosisUC" 1.41495613892002 0.160974676271486 1.49653159586667e-18 1.12470105320134e-16 2.99306319173336e-18 1.43667033203201e-16 "prevalence" 1527 528 +"Gemmiger_formicilis" "diagnosis" "UC" "diagnosisUC" -1.44746012581736 0.164872569095093 1.64545079301112e-18 1.19081883316435e-16 3.29090158602225e-18 1.51095307601717e-16 "prevalence" 1527 472 +"Coprococcus_eutactus" "age" "age" "age" 0.649187236894288 0.0740854074996768 1.906504870912e-18 1.33046804205787e-16 3.81300974182399e-18 1.67772428640256e-16 "prevalence" 1527 177 +"Vescimonas_coprocola" "diagnosis" "CD" "diagnosisCD" -1.19942666904347 0.138951055251296 6.02839829258536e-18 3.9264967545706e-16 1.20567965851707e-17 5.09279087757612e-16 "prevalence" 1527 599 +"Clostridium_fessum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.66453221259049 0.309121800094995 6.7139175862956e-18 4.23193385923277e-16 1.34278351725912e-17 5.45376690086783e-16 "prevalence" 1527 926 +"Bacteroides_thetaiotaomicron" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.05730435377746 0.239353642651514 8.30838472902755e-18 5.07330742516245e-16 1.66167694580551e-17 6.49900316581712e-16 "prevalence" 1527 1062 +"Lacrimispora_amygdalina" "age" "age" "age" -0.490742803277601 0.0576796646885697 1.76847698320534e-17 1.04715273490401e-15 3.53695396641067e-17 1.33393692447488e-15 "prevalence" 1527 865 +"Anaerostipes_hadrus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.00089705073568 0.236827896734184 2.94466328462588e-17 1.59829779393305e-15 5.88932656925177e-17 2.00617059907415e-15 "prevalence" 1527 1128 +"Bacteroides_intestinalis" "age" "age" "age" 0.667370374903454 0.0789696823967667 2.88893802866339e-17 1.59829779393305e-15 5.77787605732681e-17 2.00617059907415e-15 "prevalence" 1527 158 +"GGB9342_SGB14306" "age" "age" "age" 0.804139092158702 0.0958467160502985 4.86783503243169e-17 2.57074314955987e-15 4.86783503243169e-17 1.77256337732685e-15 "prevalence" 1527 92 +"Candidatus_Cibionibacter_quicibialis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.08935377985834 0.250379488214661 7.13657840171801e-17 3.57560876845051e-15 1.4273156803436e-16 4.71014174513389e-15 "prevalence" 1527 933 +"Bacteroides_eggerthii" "reads" "reads" "reads" 0.552230762831585 0.066813745179718 1.39429308388375e-16 6.81112171477211e-15 2.7885861677675e-16 8.92347573685599e-15 "prevalence" 1527 409 +"Veillonella_dispar" "age" "age" "age" -0.527221869668846 0.0642311293655203 2.24531506547714e-16 1.07008430193716e-14 4.49063013095428e-16 1.39473688773168e-14 "prevalence" 1527 526 +"Haemophilus_parainfluenzae" "age" "age" "age" -0.473498884769755 0.0580115331490337 3.29110806724484e-16 1.53114884842772e-14 6.58221613448968e-16 1.9859486394346e-14 "prevalence" 1527 674 +"Bacteroides_caccae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.92045033141674 0.238101054374111 7.28207834780855e-16 3.30911188177161e-14 1.45641566956172e-15 4.27215263071437e-14 "prevalence" 1527 958 +"Clostridium_sp_AF34_10BH" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.32598487705993 0.28889653047911 8.19371769017192e-16 3.63875553786271e-14 1.63874353803439e-15 4.67706263828194e-14 "prevalence" 1527 960 +"Flavonifractor_plautii" "reads" "reads" "reads" 0.610651617235571 0.0766301113808322 1.60195691657354e-15 6.95605292218822e-14 3.20391383314708e-15 8.67521284052131e-14 "prevalence" 1527 1224 +"Escherichia_coli" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 3.53316975073643 0.386785738517075 2.88657986402541e-15 1.22616892484905e-13 2.88657986402541e-15 8.02165351687061e-14 "abundance" 1527 707 +"Bacteroides_ovatus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.9675113987018 0.378504407592304 4.50197310135384e-15 1.87167137022243e-13 9.0039462027077e-15 2.37704179751483e-13 "prevalence" 1527 1176 +"Bifidobacterium_adolescentis" "diagnosis" "CD" "diagnosisCD" -1.16784820511269 0.151190145061628 1.1241031922436e-14 4.57603674509166e-13 2.24820638448719e-14 5.79050229760602e-13 "prevalence" 1527 427 +"Clostridiales_bacterium" "reads" "reads" "reads" 0.507991262659046 0.0659644885899088 1.350257390144e-14 5.38449579661504e-13 2.70051478028797e-14 6.78986573329547e-13 "prevalence" 1527 985 +"GGB9713_SGB15249" "diagnosis" "UC" "diagnosisUC" -1.43590471626305 0.186937600861644 1.5760772106312e-14 6.15930973914672e-13 3.15215442126236e-14 7.74110481128617e-13 "prevalence" 1527 329 +"Clostridium_symbiosum" "diagnosis" "UC" "diagnosisUC" 1.24796785301432 0.163255979820422 2.10183432388165e-14 8.05291033110733e-13 4.20366864776324e-14 9.86460909341773e-13 "prevalence" 1527 539 +"Odoribacter_splanchnicus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.95587588914198 0.25717770402721 2.84566165092546e-14 1.04913638979403e-12 5.69132330185083e-14 1.30652987103358e-12 "prevalence" 1527 757 +"Veillonella_parvula" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 4.0545509254458 0.487773408119981 3.94129173741931e-14 1.42616371387358e-12 3.94129173741931e-14 9.45910016980633e-13 "abundance" 1527 547 +"Veillonella_parvula" "age" "age" "age" -0.462668655010271 0.0614699010142759 5.20183290014423e-14 1.84806936125124e-12 1.04036658002882e-13 2.33750448619241e-12 "prevalence" 1527 547 +"Vescimonas_coprocola" "diagnosis" "UC" "diagnosisUC" -1.12327242940779 0.149406384637398 5.55203037867337e-14 1.93726202855853e-12 1.11040607573464e-13 2.44289336661621e-12 "prevalence" 1527 599 +"Odoribacter_splanchnicus" "diagnosis" "UC" "diagnosisUC" -1.11168846118177 0.148837110014618 8.07072341624673e-14 2.71899888885278e-12 1.61414468324928e-13 3.47864650104334e-12 "prevalence" 1527 757 +"Blautia_wexlerae" "reads" "reads" "reads" 0.657396395548862 0.0880803041046774 8.41882006659178e-14 2.78819905256277e-12 1.68376401331828e-13 3.55610959612822e-12 "prevalence" 1527 1302 +"Blautia_faecis" "reads" "reads" "reads" 0.527824518957148 0.0707520466379199 8.63903110181698e-14 2.8134444621584e-12 1.72780622036332e-13 3.57757523275228e-12 "prevalence" 1527 1125 +"Roseburia_sp_AF02_12" "diagnosis" "UC" "diagnosisUC" -1.22100355194971 0.164616584467821 1.1957058004108e-13 3.83017890820115e-12 2.39141160082146e-13 4.8564050970528e-12 "prevalence" 1527 363 +"Coprococcus_comes" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.51914731620594 0.341044013224675 1.50658737777688e-13 4.74818021963874e-12 3.01317475555352e-13 6.00360856955569e-12 "prevalence" 1527 759 +"Firmicutes_bacterium_AF16_15" "diagnosis" "CD" "diagnosisCD" -1.16457278864629 0.15798943617334 1.69090447067785e-13 5.24448783445163e-12 3.38180894135542e-13 6.61331526309504e-12 "prevalence" 1527 827 +"Dialister_invisus" "age" "age" "age" -0.415727318114717 0.0566862960551625 2.23676813383434e-13 6.82913270861297e-12 4.47353626766817e-13 8.58918963392289e-12 "prevalence" 1527 726 +"Bilophila_wadsworthia" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.14723383540997 0.293076045345147 2.36167924647501e-13 7.09957115017257e-12 4.72335849294945e-13 8.90690458670468e-12 "prevalence" 1527 764 +"Alistipes_shahii" "diagnosis" "UC" "diagnosisUC" -1.07708382249983 0.148519174393121 4.10197183833026e-13 1.19630641374587e-11 8.20394367665882e-13 1.51988851272837e-11 "prevalence" 1527 673 +"Parabacteroides_distasonis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.8849606965823 0.399901698315178 5.42620744548184e-13 1.53663903601036e-11 1.08524148909607e-12 1.97588795256112e-11 "prevalence" 1527 1140 +"Alistipes_onderdonkii" "diagnosis" "UC" "diagnosisUC" -1.09221696818463 0.151910569105113 6.48539023310039e-13 1.78485246696875e-11 1.29707804661965e-12 2.32154985971247e-11 "prevalence" 1527 831 +"Blautia_wexlerae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.66401963032286 0.233823616064911 1.10654577093227e-12 3.00304227278008e-11 2.21309154186332e-12 3.89504111367943e-11 "prevalence" 1527 1302 +"Alistipes_communis" "age" "age" "age" 0.42291130611774 0.059593878271291 1.27903952253278e-12 3.42362085894391e-11 2.55807904506392e-12 4.4284122485041e-11 "prevalence" 1527 407 +"Ruminococcus_lactaris" "diagnosis" "CD" "diagnosisCD" -1.09796410841328 0.15565813407815 1.74235247075371e-12 4.60075233493616e-11 3.48470494150439e-12 5.93523938423973e-11 "prevalence" 1527 379 +"GGB9713_SGB15249" "age" "age" "age" 0.438446861616058 0.0622369623819675 1.85730031116817e-12 4.77521685266133e-11 3.71460062233288e-12 6.2263781860056e-11 "prevalence" 1527 329 +"Eubacterium_rectale" "antibiotics" "Yes" "antibioticsYes" -1.40545105091999 0.20093257524649 2.65940690684724e-12 6.74867674802533e-11 5.31881381368739e-12 8.77604279258419e-11 "prevalence" 1527 1211 +"Blautia_obeum" "reads" "reads" "reads" 0.416940807998322 0.0596816166095911 2.82664163548149e-12 7.0810996868344e-11 5.65328327095498e-12 9.18441097558225e-11 "prevalence" 1527 899 +"Clostridiaceae_bacterium" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.55030391117108 0.222606282816419 3.29967188400338e-12 8.1614669130919e-11 6.59934376799586e-12 1.05589500287934e-10 "prevalence" 1527 1109 +"Akkermansia_muciniphila" "age" "age" "age" 0.402884843658068 0.0579712445775997 3.65970498146367e-12 8.938829417225e-11 7.31940996291392e-12 1.15362640609509e-10 "prevalence" 1527 407 +"Ruthenibacterium_lactatiformans" "reads" "reads" "reads" 0.404201713987728 0.0582452939818321 3.93084044597641e-12 9.48254596473815e-11 7.86168089193735e-12 1.22087279733615e-10 "prevalence" 1527 797 +"Gemmiger_formicilis" "diagnosis" "CD" "diagnosisCD" -0.947778210536067 0.139698396277238 1.16521345405813e-11 2.64747335956928e-10 2.33042690810267e-11 3.56656639848757e-10 "prevalence" 1527 472 +"Eubacterium_rectale" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.59224100757678 0.382744096082115 1.26332243612112e-11 2.83739314963296e-10 2.52664487222628e-11 3.81162426438708e-10 "prevalence" 1527 1211 +"Clostridiaceae_bacterium" "reads" "reads" "reads" 0.459792370167278 0.0679984006036621 1.36276896993157e-11 3.02596655368895e-10 2.72553793984456e-11 4.05375783728993e-10 "prevalence" 1527 1109 +"Clostridium_sp_AF34_10BH" "reads" "reads" "reads" 0.432535160953567 0.064057306759689 1.45503790162731e-11 3.194543887393e-10 2.91007580323345e-11 4.26811117807572e-10 "prevalence" 1527 960 +"Oscillibacter_sp_ER4" "age" "age" "age" 0.384560759107731 0.0571833404569206 1.75533518857811e-11 3.81102773164625e-10 3.5106703771254e-11 5.07844920307455e-10 "prevalence" 1527 458 +"Dorea_longicatena" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.50738546543997 0.224272301693768 1.80198308535173e-11 3.86931313052448e-10 3.60396617067098e-11 5.1429571300386e-10 "prevalence" 1527 1020 +"Ruminococcus_bicirculans" "diagnosis" "CD" "diagnosisCD" -0.903379163423745 0.136807077874152 4.02085097880568e-11 8.44811055116806e-10 8.04170195744968e-11 1.11737332461406e-09 "prevalence" 1527 678 +"Lachnospira_sp_NSJ_43" "diagnosis" "UC" "diagnosisUC" -1.12963506188417 0.171325002529533 4.29514956093764e-11 8.92842791709803e-10 8.5902991216908e-11 1.17809816526045e-09 "prevalence" 1527 296 +"Bacteroides_xylanisolvens" "diagnosis" "UC" "diagnosisUC" -2.50891616005376 0.326415896681732 4.35630420625444e-11 8.96022991475912e-10 4.35630420625444e-11 6.13367632240625e-10 "abundance" 1527 959 +"Enterocloster_bolteae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.74885477482868 0.365500539081191 5.08982855862428e-11 1.03409581917181e-09 1.01796571169895e-10 1.37238126202257e-09 "abundance" 1527 866 +"Enterocloster_bolteae" "diagnosis" "UC" "diagnosisUC" 0.975270754756839 0.148510541353228 5.13343369803814e-11 1.03409581917181e-09 1.02668673958128e-10 1.37238126202257e-09 "prevalence" 1527 866 +"Anaerostipes_hadrus" "antibiotics" "Yes" "antibioticsYes" -1.2763111589527 0.194412615954771 5.20466310502171e-11 1.0377460925727e-09 1.04093262097725e-10 1.37403105968997e-09 "prevalence" 1527 1128 +"Alistipes_shahii" "diagnosis" "CD" "diagnosisCD" -0.898053197805288 0.136976576730745 5.5176304653169e-11 1.08903534638679e-09 1.10352609303293e-10 1.43867105462071e-09 "prevalence" 1527 673 +"Clostridium_sp_1001270H_150608_G6" "diagnosis" "CD" "diagnosisCD" -1.41571819534831 0.216008410430393 5.60175767017732e-11 1.09458344875265e-09 1.12035153400408e-10 1.44279417061989e-09 "prevalence" 1527 141 +"Roseburia_hominis" "diagnosis" "UC" "diagnosisUC" -1.02876876208489 0.157753535088926 6.96692938205993e-11 1.33464509926913e-09 1.39338587636345e-10 1.77278974149374e-09 "prevalence" 1527 876 +"Flavonifractor_plautii" "age" "age" "age" -0.418556325150903 0.0642056087091602 7.07779335389068e-11 1.34271924402936e-09 1.41555867072804e-10 1.77955947177239e-09 "prevalence" 1527 1224 +"Enterocloster_bolteae" "diagnosis" "CD" "diagnosisCD" 0.880867473865516 0.13612510792159 9.73474384733453e-11 1.81158947406587e-09 1.94694876937214e-10 2.41879752994939e-09 "prevalence" 1527 866 +"Collinsella_SGB14861" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.28743358196434 0.35400878146219 1.03658851484857e-10 1.91084335661707e-09 2.07317702958967e-10 2.54566853865895e-09 "prevalence" 1527 593 +"Blautia_obeum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.52922093913241 0.237325760903327 1.16709069557392e-10 2.13130394313219e-09 2.33418139101164e-10 2.83321327460723e-09 "prevalence" 1527 899 +"Alistipes_finegoldii" "diagnosis" "UC" "diagnosisUC" -0.952125681375197 0.147971725631546 1.23871550099116e-10 2.20585620146455e-09 2.47743100182888e-10 2.94679029298832e-09 "prevalence" 1527 639 +"Clostridium_fessum" "reads" "reads" "reads" 0.404954381207481 0.0629384308387789 1.24178189437616e-10 2.20585620146455e-09 2.48356378859811e-10 2.94679029298832e-09 "prevalence" 1527 926 +"GGB33469_SGB15236" "diagnosis" "UC" "diagnosisUC" -1.1841147788213 0.18562794595044 1.78284957005312e-10 3.11043576775339e-09 3.56569913978839e-10 4.13777834243576e-09 "prevalence" 1527 293 +"GGB3175_SGB4191" "diagnosis" "UC" "diagnosisUC" -1.86332142313712 0.29337941642426 2.13594038502769e-10 3.69347567464079e-09 4.27188076959914e-10 4.90337618771379e-09 "prevalence" 1527 154 +"Roseburia_inulinivorans" "antibiotics" "Yes" "antibioticsYes" -1.26125212230481 0.198736033587669 2.20456678775147e-10 3.77870482742664e-09 4.40913357501693e-10 5.00650005937406e-09 "prevalence" 1527 951 +"GGB9453_SGB14844" "age" "age" "age" 0.431435390774637 0.0681484324442692 2.43863283920768e-10 4.14355527635809e-09 4.87726567782064e-10 5.47914101678575e-09 "prevalence" 1527 222 +"Lacrimispora_celerecrescens" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.06738039971956 0.326658159210444 2.46946524410449e-10 4.15977162670704e-09 4.93893048759914e-10 5.49001115253125e-09 "prevalence" 1527 756 +"Ruminococcus_gnavus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.51636579183797 0.341437478241944 2.77074474475114e-10 4.62738053952456e-09 2.77074474475114e-10 3.25100716717467e-09 "abundance" 1527 767 +"Clostridium_sp_AM22_11AC" "reads" "reads" "reads" 0.361727397169615 0.0576958395038867 3.62075013380451e-10 5.99571674699493e-09 7.24150026629803e-10 7.96565029292783e-09 "prevalence" 1527 730 +"Bilophila_wadsworthia" "reads" "reads" "reads" 0.373932448579941 0.0598587188954 4.18633373879678e-10 6.87403035765454e-09 8.37266747584101e-10 9.11498644792589e-09 "prevalence" 1527 764 +"Dialister_invisus" "antibiotics" "Yes" "antibioticsYes" -1.2992076655848 0.208195004286929 4.366200966424e-10 7.10963057366041e-09 8.73240193094162e-10 9.40960861130035e-09 "prevalence" 1527 726 +"Dysosmobacter_welbionis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.35476715013347 0.377636712665423 4.50235061593064e-10 7.27073810208964e-09 9.00470122983415e-10 9.60501464515643e-09 "prevalence" 1527 1191 +"Ruminococcus_bromii" "diagnosis" "UC" "diagnosisUC" -1.00068210292534 0.160584443712045 4.61987387759432e-10 7.39937176788467e-09 9.23974775305428e-10 9.75717362722532e-09 "prevalence" 1527 429 +"Clostridium_sp_AM22_11AC" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.90703320983451 0.306979196354297 5.22294009861316e-10 8.29725605909766e-09 1.04458801944984e-09 1.07095626071751e-08 "prevalence" 1527 730 +"Faecalibacterium_prausnitzii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.83444220146166 0.45996069593685 7.1669860445062e-10 1.11802012978878e-08 1.43339720838758e-09 1.455449473132e-08 "prevalence" 1527 1374 +"Lacrimispora_amygdalina" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.62620575821068 0.26443022373522 7.75570978896504e-10 1.19328007304234e-08 1.5511419571915e-09 1.56000562551831e-08 "prevalence" 1527 865 +"Phocaeicola_vulgatus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.24771045845211 0.365799719873122 8.01411168983038e-10 1.22340423765067e-08 1.60282233732381e-09 1.59677395114523e-08 "prevalence" 1527 1288 +"Prevotella_copri_clade_A" "reads" "reads" "reads" 0.420723165128971 0.0686975805908748 9.10950295658426e-10 1.37984254086555e-08 1.82190059048702e-09 1.79806263883579e-08 "prevalence" 1527 289 +"Oscillospiraceae_bacterium" "age" "age" "age" 0.614959980527969 0.100477326667829 9.33491981694482e-10 1.40311025556232e-08 1.86698396251755e-09 1.82549543001716e-08 "prevalence" 1527 81 +"Clostridium_sp_AF20_17LB" "diagnosis" "UC" "diagnosisUC" 2.15438360709496 0.26244834595507 9.72171121382814e-10 1.45009341311605e-08 9.72171121382814e-10 1.01644822196065e-08 "abundance" 1527 654 +"Bacteroides_uniformis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.12253777821977 0.39593944718432 1.03562580733296e-09 1.53304002085501e-08 1.03562580733296e-09 1.07095626071751e-08 "abundance" 1527 1244 +"Roseburia_hominis" "reads" "reads" "reads" 0.36280646433289 0.0595404197458558 1.10504094219273e-09 1.61138059779447e-08 2.21008188316433e-09 2.14114354919407e-08 "prevalence" 1527 876 +"Clostridium_fessum" "diagnosis" "UC" "diagnosisUC" -0.96769113219533 0.159339431271413 1.25430759280506e-09 1.81549410099339e-08 2.50861518403682e-09 2.40827057667535e-08 "prevalence" 1527 926 +"Ruminococcus_torques" "reads" "reads" "reads" 0.390322704999764 0.0642887619077534 1.26800943542803e-09 1.8218312035488e-08 2.5360188692482e-09 2.41264497831181e-08 "prevalence" 1527 1093 +"Clostridium_sp_AF20_17LB" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.55065801720366 0.420933648736136 1.36524008934279e-09 1.94721104713563e-08 2.7304801768217e-09 2.57445273814617e-08 "prevalence" 1527 654 +"GGB33469_SGB15236" "age" "age" "age" 0.382017643381418 0.0631544446073691 1.45799117060185e-09 2.06443097634494e-08 2.91598233907796e-09 2.72502420359852e-08 "prevalence" 1527 293 +"Coprococcus_eutactus" "diagnosis" "CD" "diagnosisCD" -1.35233655477055 0.223747885534772 1.5032145013477e-09 2.11315189613914e-08 3.00642900043574e-09 2.78490265303521e-08 "prevalence" 1527 177 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5.1320158220632e-08 "prevalence" 1527 652 +"Clostridium_sp_AF20_17LB" "reads" "reads" "reads" 0.340517146316562 0.057499053361596 3.17788909747079e-09 4.22421448738634e-08 6.35577818484257e-09 5.59308480266146e-08 "prevalence" 1527 654 +"Bacteroides_thetaiotaomicron" "reads" "reads" "reads" 0.387044347264952 0.0654696414735284 3.38360365784502e-09 4.46727131583053e-08 6.76720730424126e-09 5.90592637461055e-08 "prevalence" 1527 1062 +"Roseburia_inulinivorans" "diagnosis" "CD" "diagnosisCD" -0.882509739309594 0.149890711125149 3.91635588672037e-09 5.13594590781987e-08 7.83271175810289e-09 6.7797898496366e-08 "prevalence" 1527 951 +"Waltera_intestinalis" "diagnosis" "CD" "diagnosisCD" -0.810665412550337 0.137764198778112 3.9939960101069e-09 5.20284546916592e-08 7.98799200426177e-09 6.85798337926864e-08 "prevalence" 1527 524 +"Clostridium_sp_AT4" "reads" "reads" "reads" 0.342337858838054 0.0585557815710161 5.02462571466395e-09 6.41707101075383e-08 1.0049251404081e-08 8.55807216347546e-08 "prevalence" 1527 528 +"Anaerostipes_hadrus" "age" "age" "age" -0.363147308433847 0.0623581898907412 5.76035352080535e-09 7.30891609068419e-08 1.1520707008429e-08 9.65544968325479e-08 "prevalence" 1527 1128 +"Eubacterium_ventriosum" "diagnosis" "CD" "diagnosisCD" -0.802021553074345 0.138003867111254 6.18831626495805e-09 7.80127095595357e-08 1.23766324916208e-08 1.02911211898831e-07 "prevalence" 1527 520 +"Eubacterium_siraeum" "age" "age" "age" 0.325976814495884 0.0561198067585968 6.30020574759505e-09 7.89141155820559e-08 1.26004114554975e-08 1.03953394507854e-07 "prevalence" 1527 565 +"Fusicatenibacter_saccharivorans" "antibiotics" "Yes" "antibioticsYes" -1.15543162997613 0.199982136488736 7.57402894020218e-09 9.42653028608603e-08 1.51480578230384e-08 1.24002705900221e-07 "prevalence" 1527 1119 +"GGB33512_SGB15201" "age" "age" "age" 0.482633963700395 0.0844182453781081 1.08308942443545e-08 1.33946628819422e-07 1.08308942443545e-08 9.1499394576307e-08 "prevalence" 1527 121 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2.87334112184279e-07 "prevalence" 1527 593 +"GGB9708_SGB15234" "age" "age" "age" 0.357564084832923 0.0637246449609789 2.01067706700582e-08 2.39564816398132e-07 4.0213540935834e-08 3.09967147651392e-07 "prevalence" 1527 282 +"Bacteroides_uniformis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.97702094438259 0.353153237038414 2.16594133690176e-08 2.56499961957941e-07 4.33188262689049e-08 3.31483192318577e-07 "prevalence" 1527 1244 +"Bacteroides_uniformis" "reads" "reads" "reads" 0.446555321243741 0.0802781695141451 2.65785098846837e-08 3.1098448092618e-07 5.31570190629501e-08 4.00955800931967e-07 "prevalence" 1527 1244 +"Ruthenibacterium_lactatiformans" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.33289703344804 0.239864625641965 2.74651939449632e-08 3.17556147742355e-07 5.49303871355893e-08 4.11393537696329e-07 "prevalence" 1527 797 +"Bilophila_wadsworthia" "diagnosis" "UC" "diagnosisUC" -0.827610360629959 0.14901633188566 2.79488177846988e-08 3.21246999713538e-07 5.5897634788261e-08 4.15689453073265e-07 "prevalence" 1527 764 +"Enterocloster_bolteae" "reads" "reads" "reads" 0.313059825603443 0.0564835579301444 2.98192277580942e-08 3.40741351107111e-07 5.96384546270019e-08 4.40407049553245e-07 "prevalence" 1527 866 +"Parasutterella_excrementihominis" "diagnosis" "CD" "diagnosisCD" -0.748659829795594 0.135235100340749 3.09479577346296e-08 3.51583194264338e-07 6.18959145114829e-08 4.53903373084208e-07 "prevalence" 1527 699 +"Bacteroides_fragilis" "diagnosis" "CD" "diagnosisCD" 1.7480024850774 0.279907319609918 3.14210990559616e-08 3.54894956967335e-07 3.14210990559616e-08 2.47617019426085e-07 "abundance" 1527 787 +"GGB3746_SGB5089" "antibiotics" "Yes" "antibioticsYes" -1.27826144671252 0.231536136779606 3.37486728495089e-08 3.7682803855966e-07 6.74973445600449e-08 4.91566867968327e-07 "prevalence" 1527 651 +"Clostridium_symbiosum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.66672195928922 0.447010318038185 3.57871448031233e-08 3.95073903645779e-07 3.57871448031233e-08 2.79934999348875e-07 "abundance" 1527 539 +"Bacteroides_fragilis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.79490695005213 0.478001382815327 3.87634658816083e-08 4.25527035576756e-07 7.75269302606102e-08 5.60742728460304e-07 "abundance" 1527 787 +"Oscillospiraceae_bacterium" "diagnosis" "UC" "diagnosisUC" -4.04635095127963 0.642943454840981 4.60626162768207e-08 5.00035290027265e-07 4.60626162768207e-08 3.49943329412393e-07 "abundance" 1527 81 +"Clostridium_sp_AF34_10BH" "diagnosis" "UC" "diagnosisUC" -0.920119743769929 0.168573185440937 4.80767518851309e-08 5.1901642642843e-07 9.61535014588875e-08 6.90735357418947e-07 "prevalence" 1527 960 +"Faecalibacterium_prausnitzii" "age" "age" "age" -0.560281398171785 0.103038801113628 5.4010061295689e-08 5.79866262482288e-07 1.08020119674291e-07 7.65565411919809e-07 "prevalence" 1527 1374 +"Clostridium_sp_AF36_4" "diagnosis" "UC" "diagnosisUC" -0.801909503082171 0.14821390163215 6.28533135093423e-08 6.7112226555877e-07 1.25706623068146e-07 8.84974626399746e-07 "prevalence" 1527 568 +"Roseburia_hominis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.27382735075456 0.236182192006337 6.91330343532076e-08 7.34162766990042e-07 1.38266063927039e-07 9.66946778191744e-07 "prevalence" 1527 876 +"Faecalibacterium_SGB15315" "diagnosis" "CD" "diagnosisCD" -0.740133977820123 0.137364755468718 7.12094917025336e-08 7.52126198847301e-07 1.42418978334276e-07 9.89437112638125e-07 "prevalence" 1527 619 +"Clostridium_sp_AT4" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 3.31872997643215 0.594164203030907 7.26386466531892e-08 7.63096320216837e-07 1.45277288030005e-07 1.00269814483455e-06 "abundance" 1527 528 +"Roseburia_faecis" "age" "age" "age" 0.314340417965388 0.0584690667026871 7.60813536451735e-08 7.94989117768284e-07 1.52162701501974e-07 1.04340138172782e-06 "prevalence" 1527 922 +"Clostridium_sp_AT4" "diagnosis" "CD" "diagnosisCD" 0.813879892325335 0.151529228306779 7.82542022442188e-08 8.13344208431933e-07 1.56508398364717e-07 1.06627657208478e-06 "prevalence" 1527 528 +"Akkermansia_sp_KLE1798" "diagnosis" "CD" "diagnosisCD" -1.52069767676839 0.285338174083823 9.85065586242768e-08 1.01842230450707e-06 9.85065586242768e-08 7.02857607481326e-07 "prevalence" 1527 70 +"Fusicatenibacter_saccharivorans" "reads" "reads" "reads" 0.366832564760869 0.0689479007827118 1.03521574361045e-07 1.06463766474464e-06 2.07043138005374e-07 1.39259588365398e-06 "prevalence" 1527 1119 +"Lacrimispora_amygdalina" "reads" "reads" "reads" 0.313449103176252 0.0590674494040284 1.1167048434326e-07 1.14242998118707e-06 2.23340956216223e-07 1.4833210677002e-06 "prevalence" 1527 865 +"Alistipes_communis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.00479841433725 0.378384848412195 1.16882475752427e-07 1.18952269593876e-06 2.33764937843341e-07 1.54284858976605e-06 "prevalence" 1527 407 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1527 960 +"Faecalibacterium_SGB15315" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.61971591045963 0.50262425860983 1.86738861190195e-07 1.83360670736503e-06 3.73477687508988e-07 2.37585806029814e-06 "prevalence" 1527 619 +"Klebsiella_pneumoniae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 3.69228958172105 0.654175508718895 1.89331146316363e-07 1.84976529951086e-06 1.89331146316363e-07 1.28162622121846e-06 "abundance" 1527 119 +"Fusicatenibacter_saccharivorans" "diagnosis" "UC" "diagnosisUC" -0.969122774168081 0.186406542667602 2.00391519127968e-07 1.94808471828881e-06 4.00782998099176e-07 2.53429249097443e-06 "prevalence" 1527 1119 +"Lactobacillus_acidophilus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.3488242959603 0.452972502221417 2.15601054132398e-07 2.08556663254805e-06 2.15601054132398e-07 1.44097919723932e-06 "prevalence" 1527 26 +"Ruminococcus_bromii" "age" "age" "age" 0.297750395046856 0.0576561767223427 2.4141641791072e-07 2.32378167782043e-06 4.82832777539553e-07 3.03494888739147e-06 "prevalence" 1527 429 +"Parabacteroides_merdae" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.50397692144411 0.485067624332875 2.44169655055056e-07 2.33876228420382e-06 4.88339250491291e-07 3.05139792022961e-06 "prevalence" 1527 826 +"Akkermansia_muciniphila" "diagnosis" "UC" "diagnosisUC" -0.842338934083437 0.165942988110716 3.85312710295866e-07 3.63720307206822e-06 7.70625272125847e-07 4.7039322969069e-06 "prevalence" 1527 407 +"GGB9708_SGB15234" "diagnosis" "UC" "diagnosisUC" -0.960025060546137 0.18912637284391 3.85253307572991e-07 3.63720307206822e-06 7.70506466725872e-07 4.7039322969069e-06 "prevalence" 1527 282 +"Prevotella_copri_clade_A" "age" "age" "age" -0.386535115021869 0.0762842529631017 4.04056247370353e-07 3.79579763154649e-06 8.08112331479256e-07 4.90440587380514e-06 "prevalence" 1527 289 +"Faecalibacterium_SGB15346" "reads" "reads" "reads" 0.287464939519249 0.0569740198940365 4.52232169036207e-07 4.22804621194617e-06 9.04464133558481e-07 5.45779500021575e-06 "prevalence" 1527 743 +"Bacteroides_xylanisolvens" "reads" "reads" "reads" 0.30171101542261 0.0599098745450371 4.75158125725052e-07 4.42123322698454e-06 9.5031602567486e-07 5.70189615404916e-06 "prevalence" 1527 959 +"Candidatus_Cibionibacter_quicibialis" "reads" "reads" "reads" 0.299169129497617 0.0595607729424649 5.0891159801403e-07 4.71285906407305e-06 1.01782293703705e-06 6.07243514978034e-06 "prevalence" 1527 933 +"GGB6601_SGB9333" "age" "age" "age" 0.533097705362222 0.106572928937349 5.66836058358365e-07 5.22451725486908e-06 5.66836058358365e-07 3.52105222133196e-06 "prevalence" 1527 69 +"Oscillibacter_sp_ER4" "diagnosis" "UC" "diagnosisUC" -0.789291349088083 0.158307659816794 6.1703896397939e-07 5.66053584796117e-06 1.2340775472217e-06 7.25566929489219e-06 "prevalence" 1527 458 +"Blautia_obeum" "diagnosis" "UC" "diagnosisUC" 1.61527308642655 0.225035175794205 6.48189288021683e-07 5.91851340558116e-06 6.48189288021683e-07 4.00285314708127e-06 "abundance" 1527 899 +"Blautia_wexlerae" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.85640045000302 0.373413410288811 6.64591898577533e-07 6.04005846428139e-06 1.32918335547268e-06 7.75479349933229e-06 "prevalence" 1527 1302 +"Roseburia_inulinivorans" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.87267941299064 0.377179684571656 6.87177034400715e-07 6.21640706119906e-06 1.37435359658915e-06 7.97427141757223e-06 "prevalence" 1527 951 +"Clostridium_sp_AF36_4" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.7638590209868 0.357673004909349 8.16068793712488e-07 7.3483798290977e-06 1.6321369214567e-06 9.36704667966454e-06 "prevalence" 1527 568 +"Eisenbergiella_massiliensis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.61255892030398 0.328932186934304 9.46702222711084e-07 8.4855786384287e-06 1.89340354917707e-06 1.07496459566182e-05 "prevalence" 1527 417 +"Phascolarctobacterium_succinatutens" "diagnosis" "CD" "diagnosisCD" -1.25387988179355 0.255835446333731 9.52924711129005e-07 8.50235107555286e-06 1.90584851419251e-06 1.07624386683812e-05 "prevalence" 1527 125 +"Gemmiger_formicilis" "antibiotics" "Yes" "antibioticsYes" 0.937621333342216 0.191440220850621 9.69531627148956e-07 8.61120363385936e-06 1.93906231430634e-06 1.08341259466005e-05 "prevalence" 1527 472 +"Alistipes_putredinis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.32674239480827 0.577238138876982 1.04629184205507e-06 9.25092425056835e-06 1.04629184205507e-06 6.20721452365255e-06 "abundance" 1527 873 +"Faecalibacterium_prausnitzii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.18366823474475 0.309490360335197 1.06123665544189e-06 9.34079470600653e-06 7.08550199429391e-35 3.74114505298719e-32 "abundance" 1527 1374 +"Ruminococcus_torques" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.73977108181417 0.35678739102336 1.08142193639828e-06 9.47577786422531e-06 2.16284270332316e-06 1.18956348682774e-05 "prevalence" 1527 1093 +"Blautia_wexlerae" "age" "age" "age" -0.367451191112025 0.0755019840906123 1.13433874302303e-06 9.89507992797768e-06 2.26867619932168e-06 1.23490828169262e-05 "prevalence" 1527 1302 +"Dorea_longicatena" "antibiotics" "Yes" "antibioticsYes" -0.901701150360491 0.18571365938799 1.20186265582022e-06 1.04375094643232e-05 2.40372386716661e-06 1.30170892498869e-05 "prevalence" 1527 1020 +"Enterocloster_clostridioformis" "age" "age" "age" 0.913795563005725 0.155178611401843 1.23676181162935e-06 1.06930645129369e-05 1.23676181162935e-06 7.25566929489219e-06 "abundance" 1527 312 +"Phocaeicola_plebeius" "diagnosis" "CD" "diagnosisCD" -3.905310328259 0.731851638990529 1.25165566267071e-06 1.07741637218439e-05 2.50330975869953e-06 1.3487219924422e-05 "abundance" 1527 127 +"Bifidobacterium_longum" "dysbiosis_state" "dysbiosis_UC" 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2.24392575944942e-05 5.71890189621809e-06 2.93163126330403e-05 "prevalence" 1527 1109 +"Dysosmobacter_sp_BX15" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.82596312761118 0.723678027010375 3.16333579153394e-06 2.46261280344913e-05 3.16333579153394e-06 1.67024129792992e-05 "abundance" 1527 621 +"GGB3278_SGB4328" "diagnosis" "CD" "diagnosisCD" -0.904532331757244 0.194098318066265 3.15939052060817e-06 2.46261280344913e-05 6.31877105946789e-06 3.22348900425029e-05 "prevalence" 1527 179 +"Alistipes_onderdonkii" "diagnosis" "CD" "diagnosisCD" -0.658231265563004 0.14241634868105 3.80278081577414e-06 2.93700937313149e-05 7.60554717040635e-06 3.8612777942063e-05 "prevalence" 1527 831 +"GGB9480_SGB14874" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.32408776382515 0.50447881815491 4.0869969979682e-06 3.14409139135034e-05 8.17397729239193e-06 4.13000957931382e-05 "prevalence" 1527 332 +"Parasutterella_excrementihominis" "dysbiosis_state" "dysbiosis_CD" 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"age" "age" 2.91847979859574 0.546431039486533 8.40281242364682e-06 5.97058017302032e-05 8.40281242364682e-06 4.22541424731954e-05 "abundance" 1527 40 +"Vescimonas_coprocola" "reads" "reads" "reads" 0.259152911381333 0.0582935622264414 8.76255590884751e-06 6.20363559633625e-05 1.7525035035309e-05 8.15261541730673e-05 "prevalence" 1527 599 +"Bacteroides_thetaiotaomicron" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.59190198245345 0.358567221215058 9.01181172813418e-06 6.3570686342145e-05 1.80235422435177e-05 8.34774588120821e-05 "prevalence" 1527 1062 +"Alistipes_putredinis" "age" "age" "age" 0.265293466511859 0.0599136801099253 9.51426130641751e-06 6.68736208371936e-05 1.90284320916668e-05 8.73653229947832e-05 "prevalence" 1527 873 +"Parasutterella_excrementihominis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.88492323185135 0.426169890355157 9.73674471089328e-06 6.81921117028153e-05 1.9473394617589e-05 8.86375203283362e-05 "prevalence" 1527 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2.32599096720072e-05 0.000103936950155055 "prevalence" 1527 1244 +"Roseburia_sp_AF02_12" "reads" "reads" "reads" 0.28949643585455 0.0660379979492996 1.16634473677883e-05 7.99662321286257e-05 2.33267586995721e-05 0.000103936950155055 "prevalence" 1527 363 +"Odoribacter_splanchnicus" "antibiotics" "Yes" "antibioticsYes" 0.877106859928885 0.201367328041084 1.32608693824351e-05 8.96599957552879e-05 2.65215629142135e-05 0.000117675506039535 "prevalence" 1527 757 +"Alistipes_putredinis" "diagnosis" "CD" "diagnosisCD" -0.650867907082522 0.149847737676372 1.40212329990576e-05 9.41494476981393e-05 2.80422694031404e-05 0.000123902244726846 "prevalence" 1527 873 +"GGB1680_SGB2312" "age" "age" "age" 1.16639875218103 0.268512140292984 1.39954203422138e-05 9.41494476981393e-05 1.39954203422138e-05 6.6846344719656e-05 "prevalence" 1527 12 +"Waltera_intestinalis" "diagnosis" "UC" "diagnosisUC" -0.638340475666128 0.147288785070007 1.4646538095015e-05 9.80114227317102e-05 2.92928616689519e-05 0.000128353783910428 "prevalence" 1527 524 +"Phascolarctobacterium_faecium" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.21662308611554 0.281297101096002 1.52499583480121e-05 0.000101701087413023 3.04996841347947e-05 0.000133089530770013 "prevalence" 1527 503 +"GGB9713_SGB15249" "diagnosis" "CD" "diagnosisCD" -0.648591398518527 0.150158806021359 1.56475455370527e-05 0.000103645098235258 3.12948462284242e-05 0.000135439990234491 "prevalence" 1527 329 +"Phascolarctobacterium_faecium" "reads" "reads" "reads" 0.259558129624767 0.0601716883804979 1.60598901491255e-05 0.000105660018018152 3.21195223781793e-05 0.00013844169645452 "prevalence" 1527 503 +"Ruminococcus_bicirculans" "reads" "reads" "reads" 0.240396114126552 0.0561197363663511 1.8386964808217e-05 0.000120564192064618 3.67735915359591e-05 0.00015721826988653 "prevalence" 1527 678 +"Prevotella_copri_clade_B" "diagnosis" "UC" "diagnosisUC" -7.40394923116873 1.4840094772915 1.8899788862492e-05 0.000123512332566252 1.8899788862492e-05 8.71536115231072e-05 "abundance" 1527 40 +"Eisenbergiella_massiliensis" "diagnosis" "CD" "diagnosisCD" 0.65267190245544 0.152624978458298 1.90015571614987e-05 0.000123763475645228 3.80027532638227e-05 0.00016181817518789 "prevalence" 1527 417 +"Bacteroides_cellulosilyticus" "diagnosis" "UC" "diagnosisUC" -1.7619650568615 0.368886694524202 1.94360644585334e-05 0.000126172989873669 1.94360644585334e-05 8.86375203283362e-05 "abundance" 1527 433 +"Parasutterella_excrementihominis" "diagnosis" "CD" "diagnosisCD" 1.21006474942789 0.248679044795565 1.99567930314615e-05 0.000129124415839324 6.18959145114829e-08 4.53903373084208e-07 "abundance" 1527 699 +"Bacteroides_finegoldii" "age" "age" "age" 0.261212079085869 0.0612638277994342 2.01047371755128e-05 0.0001293010561119 4.02090701505688e-05 0.000169264904489448 "prevalence" 1527 333 +"Coprococcus_comes" "reads" "reads" "reads" 0.242292907307477 0.0568283190549915 2.01164386172044e-05 0.0001293010561119 4.02324725633063e-05 0.000169264904489448 "prevalence" 1527 759 +"Ruminococcus_bromii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.53145612749782 0.359314076025547 2.02455237790497e-05 0.000129704109718895 4.04906376768663e-05 0.000169633942165418 "prevalence" 1527 429 +"Ruminococcus_torques" "diagnosis" "CD" "diagnosisCD" -0.695923714437689 0.16379138231605 2.14878344227347e-05 0.000137213164908574 4.29752071184412e-05 0.00017727272936357 "prevalence" 1527 1093 +"Acidaminococcus_intestini" "diagnosis" "CD" "diagnosisCD" 0.930577937963633 0.21947262223007 2.23456187152892e-05 0.000142225859836076 4.46907381039028e-05 0.000182920230378765 "prevalence" 1527 173 +"Dorea_longicatena" "reads" "reads" "reads" 0.25459920622627 0.0602878171445266 2.41005192671961e-05 0.000152402636401622 4.82004576993634e-05 0.000195017943795125 "prevalence" 1527 1020 +"Lacrimispora_amygdalina" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.57875529381257 0.373814961277439 2.40686505473547e-05 0.000152402636401622 4.81367217947703e-05 0.000195017943795125 "prevalence" 1527 865 +"Collinsella_aerofaciens" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.24292195774629 0.531448232234375 2.43873618295853e-05 0.000153719048435515 4.87741289157536e-05 0.000196585802042121 "prevalence" 1527 698 +"GGB9713_SGB15249" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.14576776961182 0.508873123498971 2.47898090411458e-05 0.000155753333975559 4.95790035476593e-05 0.000199070067476533 "prevalence" 1527 329 +"Clostridium_sp_AM49_4BH" "age" "age" "age" 0.269661775704869 0.0640160969520344 2.52665138390928e-05 0.000158239641158934 5.0532389281464e-05 0.000202129557125856 "prevalence" 1527 344 +"Clostridium_symbiosum" "diagnosis" "CD" "diagnosisCD" 0.63929772299135 0.152046133152909 2.61509673390463e-05 0.000163255559682097 5.23012508049999e-05 0.00020841555037766 "prevalence" 1527 539 +"Veillonella_parvula" "reads" "reads" "reads" -0.96366020013573 0.143110835527975 2.7279579143169e-05 0.000169758909699848 5.45584141108998e-05 0.000216592801883873 "abundance" 1527 547 +"Roseburia_inulinivorans" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.960482282643063 0.229221321672017 2.7871350405798e-05 0.000172890852993426 5.57419239994225e-05 0.00022046244098648 "prevalence" 1527 951 +"Ruminococcus_bicirculans" "diagnosis" "UC" "diagnosisUC" -0.614127710064175 0.146625482994736 2.80915074282641e-05 0.000173705080743127 5.61822257237387e-05 0.000221374740165179 "prevalence" 1527 678 +"Sutterella_wadsworthensis" "age" "age" "age" -0.621316452210877 0.101013296737359 2.85993348057012e-05 0.000176287382367004 2.85993348057012e-05 0.000125837073145085 "abundance" 1527 536 +"Clostridium_fessum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.91086768920497 0.457692315680728 2.97979558241545e-05 0.000182524155737924 5.95950237301376e-05 0.000233082759477872 "prevalence" 1527 926 +"GGB9708_SGB15234" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.39557277460222 0.574366709051084 3.03522653476948e-05 0.000185338520279361 6.07036094353778e-05 0.000235672836631467 "prevalence" 1527 282 +"Phocaeicola_vulgatus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.58995996406001 0.507400877451175 3.09965725167061e-05 0.000188683185973968 3.09965725167061e-05 0.0001347011546405 "abundance" 1527 1288 +"Roseburia_hominis" "antibiotics" "Yes" "antibioticsYes" -0.798529835129373 0.191775140329254 3.12876281331912e-05 0.000189863432833092 6.25742773507081e-05 0.000242045556345596 "prevalence" 1527 876 +"Bacteroides_finegoldii" "reads" "reads" "reads" 0.274308762048149 0.0659125384127351 3.15875601991694e-05 0.000191090070059372 6.31741226243796e-05 0.000243473990844324 "prevalence" 1527 333 +"Prevotella_stercorea" "age" "age" "age" -1.38311788498821 0.332899482658092 3.25627312505182e-05 0.00019638141007257 3.25627312505182e-05 0.000139781480490029 "prevalence" 1527 40 +"Firmicutes_bacterium_AF16_15" "antibiotics" "Yes" "antibioticsYes" -0.864563996191169 0.208618809410834 3.40959779286491e-05 0.00020499551037717 6.81907933215873e-05 0.000260903904882595 "prevalence" 1527 827 +"Coprococcus_comes" "diagnosis" "UC" "diagnosisUC" 1.28769150873368 0.205713155078603 3.83413245239606e-05 0.000229812724293923 7.66811789907549e-05 0.000291278147533227 "abundance" 1527 759 +"Flavonifractor_plautii" "diagnosis" "CD" "diagnosisCD" 0.919038302688689 0.17470068318003 3.93300248304751e-05 0.000235017946540515 3.93300248304751e-05 0.000166797213738882 "abundance" 1527 1224 +"Bacteroides_ovatus" "diagnosis" "UC" "diagnosisUC" 1.26343939852593 0.199316486761413 4.06414653104648e-05 0.000240646737020146 4.06414653104648e-05 0.000169633942165418 "abundance" 1527 1176 +"Barnesiella_intestinihominis" "age" "age" "age" 0.235559171274128 0.0573914158913035 4.05309238762916e-05 0.000240646737020146 8.1060204996793e-05 0.000306808517837324 "prevalence" 1527 431 +"Bacteroides_fragilis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.875061928675612 0.213308825359613 4.09020839331995e-05 0.000241458223581486 7.75269302606102e-08 5.60742728460304e-07 "prevalence" 1527 787 +"GGB1543_SGB2126" "diagnosis" "UC" "diagnosisUC" -7.55293540070802 1.6129620640864 4.11575254186669e-05 0.000242234351409865 4.11575254186669e-05 0.000171111601740599 "abundance" 1527 42 +"Bacteroides_ovatus" "reads" "reads" "reads" -0.00272360430800005 0.0761498783601922 4.16845981150438e-05 0.00024442923591538 8.33674586243675e-05 0.000314226932749588 "abundance" 1527 1176 +"Bacteroides_stercoris" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.45376618741882 0.74409055342062 4.19057287777136e-05 0.00024442923591538 4.19057287777136e-05 0.00017353901799712 "abundance" 1527 826 +"Enterocloster_clostridioformis" "reads" "reads" "reads" 0.271315523735475 0.0662189151217583 4.18085293281883e-05 0.00024442923591538 8.36153107032521e-05 0.000314226932749588 "prevalence" 1527 312 +"Barnesiella_intestinihominis" "diagnosis" "CD" "diagnosisCD" -0.577996506445857 0.141226657514909 4.26403106850411e-05 0.000247973711543364 8.5278803173987e-05 0.00031934190124727 "prevalence" 1527 431 +"Roseburia_faecis" "diagnosis" "UC" "diagnosisUC" -0.619294737187615 0.151633281527912 4.42363505261453e-05 0.000256492073970588 8.84707441975829e-05 0.000328961640396646 "prevalence" 1527 922 +"Parabacteroides_merdae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.55909836411257 0.509891312841185 4.46113354053423e-05 0.000257723921352199 4.46113354053423e-05 0.000182920230378765 "abundance" 1527 826 +"Roseburia_faecis" "reads" "reads" "reads" 0.234408071917477 0.0574294038917092 4.47125943389945e-05 0.000257723921352199 8.94231894618965e-05 0.000331336449374606 "prevalence" 1527 922 +"Ruminococcus_sp_BSD2780120874_150323_B10" "diagnosis" "UC" "diagnosisUC" -1.83207329362301 0.450661767436789 4.79716243777565e-05 0.000275695747159224 4.79716243777565e-05 0.000195017943795125 "prevalence" 1527 90 +"Prevotella_sp_885" "diagnosis" "UC" "diagnosisUC" 2.25155723123537 0.554100076056391 4.83529539382117e-05 0.000277072351892274 9.67035698682687e-05 0.000355815225717393 "prevalence" 1527 69 +"Tyzzerella_nexilis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.49839895680813 0.369183521502233 4.93502092909675e-05 0.000281959967703364 9.86979831387781e-05 0.000361892604842186 "prevalence" 1527 188 +"Proteus_mirabilis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.87411312008869 0.463810010596197 5.32938497939833e-05 0.000302721460748382 0.000106584859353541 0.00038678217002522 "prevalence" 1527 100 +"Clostridiales_bacterium" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.52644993273919 0.379088543043531 5.65815609542735e-05 0.000319538641920955 0.000113159920435507 0.000407839167166879 "prevalence" 1527 985 +"Alistipes_shahii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.21130104237167 0.692918839779758 5.71075056408077e-05 0.000321579440985989 5.71075056408077e-05 0.000224184111363171 "abundance" 1527 673 +"GGB3746_SGB5089" "diagnosis" "CD" "diagnosisCD" -0.547309830582067 0.136072588195752 5.76594668084346e-05 0.0003237545923669 0.000115315609002757 0.000414194840499697 "prevalence" 1527 651 +"GGB3746_SGB5089" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.08966236646763 0.271007971529399 5.80067260253122e-05 0.000324771182388138 0.00011601008727036 0.000415276786974577 "prevalence" 1527 651 +"Prevotella_copri_clade_E" "age" "age" "age" -1.31848453829175 0.328669186890663 6.0312330895609e-05 0.000336715127342914 6.0312330895609e-05 0.000235017791238978 "prevalence" 1527 38 +"Prevotella_sp_885" "diagnosis" "CD" "diagnosisCD" 2.23594292607024 0.558674869074531 6.274939289751e-05 0.000349322831116053 0.000125494848308711 0.000446203905097639 "prevalence" 1527 69 +"Collinsella_aerofaciens" "diagnosis" "UC" "diagnosisUC" 1.35700933959354 0.242264494894585 6.70261348263423e-05 0.000371017188245532 6.70261348263423e-05 0.000257380357733155 "abundance" 1527 698 +"Alistipes_shahii" "reads" "reads" "reads" 0.02038091942929 0.0846406228031982 6.76602943685545e-05 0.000371371391000437 0.000135316010821675 0.000477905376012337 "abundance" 1527 673 +"Ruthenibacterium_lactatiformans" "reads" "reads" "reads" -0.767159720892472 0.101159408352525 6.75901568291115e-05 0.000371371391000437 7.86168089193735e-12 1.22087279733615e-10 "abundance" 1527 797 +"Phascolarctobacterium_faecium" "antibiotics" "Yes" "antibioticsYes" 0.763173431946333 0.192215101766866 7.1748006354011e-05 0.000391607833563512 0.000143490864931606 0.000505087844559253 "prevalence" 1527 503 +"Gemmiger_formicilis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.57453395504445 0.648770533361868 7.24949088799498e-05 0.000393486255420616 0.000144984562248086 0.000508650158584648 "abundance" 1527 472 +"Dysgonomonas_mossii" "diagnosis" "CD" "diagnosisCD" -3.59191309312294 0.908111821021644 7.6418109194266e-05 0.000413631538408853 7.6418109194266e-05 0.000291278147533227 "prevalence" 1527 31 +"Candidatus_Cibionibacter_quicibialis" "diagnosis" "UC" "diagnosisUC" -0.59949930653047 0.152725989814079 8.66123403702387e-05 0.000465331665618694 0.000173217179042973 0.000602200259037667 "prevalence" 1527 933 +"Phocaeicola_plebeius" "age" "age" "age" 0.335360573117613 0.0854394260278001 8.66840973823974e-05 0.000465331665618694 0.000173360680632056 0.000602200259037667 "prevalence" 1527 127 +"Anaerostipes_hadrus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.35193416630772 0.344575227536458 8.72788535254454e-05 0.000467240766544439 0.000174550089452618 0.000604343916268737 "prevalence" 1527 1128 +"Bacteroides_thetaiotaomicron" "age" "age" "age" 0.529335222904813 0.0902290025857688 8.7738086043565e-05 0.000468392069882046 8.7738086043565e-05 0.00032739017265726 "abundance" 1527 1062 +"Phocaeicola_plebeius" "diagnosis" "UC" "diagnosisUC" 1.00837432509574 0.257135263850223 8.79733314466279e-05 0.000468392069882046 9.59090275934489e-06 4.77735533673029e-05 "prevalence" 1527 127 +"Clostridium_sp_1001270H_150608_G6" "diagnosis" "UC" "diagnosisUC" -3.0786495576353 0.753577973027053 9.42805814342362e-05 0.000498802346635065 9.42805814342362e-05 0.000348112916064872 "abundance" 1527 141 +"Bacteroides_ovatus" "reads" "reads" "reads" 0.278268815013144 0.0712939782491789 9.49613474658363e-05 0.000498802346635065 8.33674586243675e-05 0.000314226932749588 "prevalence" 1527 1176 +"Clostridiaceae_bacterium" "diagnosis" "CD" "diagnosisCD" -0.703688168232141 0.180280793120553 9.48939937182424e-05 0.000498802346635065 0.000189778982566441 0.000650670797370655 "prevalence" 1527 1109 +"GGB3746_SGB5089" "diagnosis" "UC" "diagnosisUC" -0.57432164609494 0.147105179590344 9.45545748292052e-05 0.000498802346635065 0.000189100209090789 0.000650455442344864 "prevalence" 1527 651 +"GGB1549_SGB2133" "age" "age" "age" 2.19992972066252 0.500336487491687 0.000101757565140748 0.000533067780924989 0.000101757565140748 0.000371666684460263 "abundance" 1527 46 +"GGB1549_SGB2133" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -6.22034318636588 1.36232730736988 0.00010206755539155 0.000533262040735529 0.00010206755539155 0.000371666684460263 "abundance" 1527 46 +"Phocaeicola_massiliensis" "diagnosis" "UC" "diagnosisUC" -1.63741747046224 0.381341394100811 0.000103386187841448 0.00053871096277917 0.000206761686979059 0.000704323682096407 "abundance" 1527 396 +"Oscillibacter_sp_ER4" "antibiotics" "Yes" "antibioticsYes" -1.55343543712644 0.334529065872323 0.000104179515277858 0.000541400991630145 0.000208348177184312 0.000707445900664417 "abundance" 1527 458 +"Parasutterella_SGB9260" "diagnosis" "UC" "diagnosisUC" 1.70046535937706 0.356669937418981 0.000107818077065502 0.000558598562446212 0.000107818077065502 0.00038991742938757 "abundance" 1527 269 +"Clostridium_sp_AT4" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.05568713888078 0.272679633842417 0.000108154739943281 0.000558598562446212 1.45277288030005e-07 1.00269814483455e-06 "prevalence" 1527 528 +"Escherichia_coli" "antibiotics" "Yes" "antibioticsYes" -0.74623648009757 0.193016573121992 0.000110554141869121 0.00056848103476911 2.14279678642469e-05 9.71155968439688e-05 "prevalence" 1527 707 +"Alistipes_onderdonkii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.0074977261105 0.674924861894761 0.000119481257432774 0.000609572785962508 0.000119481257432774 0.000426257458949356 "abundance" 1527 831 +"Faecalibacterium_prausnitzii" "reads" "reads" "reads" 0.435781055135974 0.113254811239502 0.000119186754737949 0.000609572785962508 0.000238359303993394 0.000799071190530235 "prevalence" 1527 1374 +"GGB16040_SGB9347" "diagnosis" "UC" "diagnosisUC" 1.08150861079991 0.281933608067714 0.000125034029051706 0.000634944706475924 0.000250052424594992 0.000835618229026302 "prevalence" 1527 114 +"Ruminococcus_torques" "diagnosis" "CD" "diagnosisCD" 0.879175300532024 0.184422361583028 0.000127949128556626 0.00064770102901463 4.29752071184412e-05 0.00017727272936357 "abundance" 1527 1093 +"Blautia_obeum" "diagnosis" "CD" "diagnosisCD" 0.954081960812642 0.210400525157315 0.000131697345953863 0.000664952490940176 0.000131697345953863 0.000466685897071407 "abundance" 1527 899 +"Ruminococcus_torques" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.80919196942661 0.213064209524597 0.000145939854821463 0.000734965145157572 0.0002918584112017 0.000966151981909076 "prevalence" 1527 1093 +"Alistipes_shahii" "reads" "reads" "reads" 0.217703108130579 0.0573881754594081 0.000148527529843258 0.000746074018801355 0.000135316010821675 0.000477905376012337 "prevalence" 1527 673 +"Clostridiales_bacterium" "diagnosis" "UC" "diagnosisUC" -0.626308334188965 0.165454125520596 0.000153467924222134 0.000766947120025703 0.000306912296040503 0.00100651982800861 "prevalence" 1527 985 +"Clostridium_symbiosum" "reads" "reads" "reads" 0.215002930186303 0.0567892380152014 0.000153103871360347 0.000766947120025703 0.000306184301925268 0.00100651982800861 "prevalence" 1527 539 +"Sutterella_wadsworthensis" "diagnosis" "UC" "diagnosisUC" -0.573832696282559 0.151630311656529 0.000154067813131725 0.000767980884845387 0.000308111889372408 0.00100732555782434 "prevalence" 1527 536 +"Bacteroides_faecis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -4.57470977039409 1.11056021047305 0.000155144233980664 0.00077115151723577 0.000155144233980664 0.000542491096303249 "abundance" 1527 434 +"Bacteroides_uniformis" "reads" "reads" "reads" -0.0531657129297346 0.0689533903178872 0.000155493192318779 0.00077115151723577 5.31570190629501e-08 4.00955800931967e-07 "abundance" 1527 1244 +"Dysosmobacter_sp_BX15" "reads" "reads" "reads" 0.213598753663736 0.0568950380270745 0.000173854476204087 0.000857857693188854 0.000347678727029278 0.00112277900838813 "prevalence" 1527 621 +"Bacteroides_stercoris" "age" "age" "age" -0.602188840634447 0.118010420355642 0.000181100854057759 0.000891362893775467 0.000181100854057759 0.000624975496356186 "abundance" 1527 826 +"Enterocloster_bolteae" "age" "age" "age" 0.515191789090001 0.0941937509903513 0.000183287526998921 0.00089985886370827 0.000366541459680289 0.00116938906774134 "abundance" 1527 866 +"Lacrimispora_amygdalina" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.86344620751385 0.491089172487097 0.000186938042790352 0.000915481041634958 1.5511419571915e-09 1.56000562551831e-08 "abundance" 1527 865 +"Bacteroides_eggerthii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.55098273020817 0.682965305027004 0.000187598014816817 0.00091641630238015 0.000375160836618471 0.00118722407186406 "prevalence" 1527 409 +"Collinsella_aerofaciens" "reads" "reads" "reads" 0.206642368898549 0.0554144191064418 0.000192213622429706 0.000936621990592631 0.000384390298782764 0.00121169001646149 "prevalence" 1527 698 +"Lachnospira_pectinoschiza" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.11621296516324 0.29958932134225 0.000194688821939961 0.000946323278782796 0.000389339740142534 0.00122363918330511 "prevalence" 1527 500 +"Prevotella_copri_clade_B" "diagnosis" "CD" "diagnosisCD" -5.629346832824 1.32098932064675 0.000202211087677373 0.000980447804768206 0.000202211087677373 0.000691051484101314 "abundance" 1527 40 +"Acidaminococcus_intestini" "antibiotics" "Yes" "antibioticsYes" 0.83569381845436 0.225087835503559 0.00020502313424518 0.000991621792859112 0.000410004234004784 0.00128095997369542 "prevalence" 1527 173 +"Clostridium_sp_AM22_11AC" "diagnosis" "CD" "diagnosisCD" 1.00004547508949 0.235442388288503 0.000208017251185688 0.00100361903411564 0.000415991231194585 0.00129323757979312 "abundance" 1527 730 +"Blautia_obeum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.30704412093158 0.352635651119169 0.000210143047964785 0.0010113781175448 0.000420241935828961 0.00129758913519118 "prevalence" 1527 899 +"Alistipes_putredinis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.97130780086785 0.532160925207857 0.000211937434040193 0.00101750797571139 0.000423829950604438 0.00130485255929529 "prevalence" 1527 873 +"Faecalibacterium_prausnitzii" "age" "age" "age" -0.441632277851957 0.0523573419687508 0.000214990999520159 0.00102963826730978 1.08020119674291e-07 7.65565411919809e-07 "abundance" 1527 1374 +"Dysosmobacter_sp_BX15" "diagnosis" "CD" "diagnosisCD" -0.495317539185249 0.133892128786491 0.00021612886092496 0.00103255695415006 0.000432211010165397 0.00132678728701936 "prevalence" 1527 621 +"Phocaeicola_dorei" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.879431017955434 0.23831875309596 0.000224125291386823 0.00106814833992647 0.000448200350627406 0.00136791783312873 "prevalence" 1527 769 +"Paraprevotella_clara" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -6.59694715036378 1.67374769917256 0.000224811878954956 0.0010688136532311 0.000224811878954956 0.000760901744155235 "abundance" 1527 178 +"Phocaeicola_massiliensis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -4.05602554923916 0.996979381296594 0.000226877036655471 0.00107601390685629 0.000226877036655471 0.000765438181176284 "abundance" 1527 396 +"Fusicatenibacter_saccharivorans" "age" "age" "age" 0.261210342610928 0.0708789590444261 0.000228431952985166 0.00108076522066105 0.000456811724813188 0.0013861873028814 "prevalence" 1527 1119 +"Bacteroides_finegoldii" "reads" "reads" "reads" -1.05552174743493 0.188344026393167 0.000229538287208175 0.00108337636039801 6.31741226243796e-05 0.000243473990844324 "abundance" 1527 333 +"Rikenellaceae_bacterium" "diagnosis" "CD" "diagnosisCD" -1.15443053002052 0.313765458899315 0.000233894668321226 0.00110127754674621 0.000233894668321226 0.000786601177538901 "prevalence" 1527 67 +"Parasutterella_excrementihominis" "reads" "reads" "reads" 0.205366175201832 0.0558698941129598 0.000237111570898311 0.00111336546409325 0.000474166919899569 0.00143062933546841 "prevalence" 1527 699 +"Anaerostipes_hadrus" "reads" "reads" "reads" 0.245014215037553 0.0667667755376046 0.000242832741084782 0.00113515592363556 0.000485606514429422 0.00146097002631758 "prevalence" 1527 1128 +"Ruthenibacterium_lactatiformans" "age" "age" "age" 0.200881743688168 0.0548042418666859 0.000246912229423824 0.00115147135153736 0.00049376349319861 0.00148129047959583 "prevalence" 1527 797 +"Coprococcus_eutactus" "diagnosis" "UC" "diagnosisUC" 2.01815126463105 0.476878532023778 0.000249513684296154 0.00116083271217782 0.000498965111513658 0.00149265483784256 "abundance" 1527 177 +"Bifidobacterium_adolescentis" "age" "age" "age" -0.226717167152245 0.0619788944416467 0.000254217103785606 0.00117990551258212 0.000508369581235354 0.0015164923101258 "prevalence" 1527 427 +"GGB1266_SGB1699" "diagnosis" "UC" "diagnosisUC" 1.17031108928669 0.320598795699041 0.000261840993843542 0.00121241066817602 0.000523613426981026 0.00155756557434356 "prevalence" 1527 84 +"Phocaeicola_sartorii" "diagnosis" "CD" "diagnosisCD" 1.30576761963379 0.335551512114836 0.000262506634050252 0.00121261929771677 0.000262506634050252 0.00087447004907592 "abundance" 1527 424 +"Parabacteroides_merdae" "reads" "reads" "reads" -0.0213661031274695 0.0815817047497241 0.000264778941312938 0.00122023125312613 0.000529487774738112 0.00157061542169507 "abundance" 1527 826 +"Clostridiaceae_bacterium_Marseille_Q4149" "diagnosis" "CD" "diagnosisCD" -0.751019910106174 0.206534495690462 0.000276589873489238 0.00126867749483092 0.000553103245020359 0.00163607010291737 "prevalence" 1527 181 +"Butyrivibrio_crossotus" "diagnosis" "CD" "diagnosisCD" -2.25274876600867 0.619665330095464 0.000277519368780909 0.00126995982809812 0.000277519368780909 0.000921573752932829 "prevalence" 1527 43 +"Haemophilus_parainfluenzae" "antibiotics" "Yes" "antibioticsYes" -0.714091374399114 0.196797979203866 0.000285017178642634 0.00130122328754137 0.000569953122493146 0.00167651949123332 "prevalence" 1527 674 +"Faecalibacterium_prausnitzii" "antibiotics" "Yes" "antibioticsYes" -1.00979070092083 0.278964877272491 0.000294856795054319 0.00134300740684415 0.000589626649579048 0.00172957150543187 "prevalence" 1527 1374 +"Candidatus_Cibionibacter_quicibialis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.37231232464837 0.379275064780359 0.000296600847289139 0.00134780943163483 0.000593113722515665 0.00173498086143086 "prevalence" 1527 933 +"Anaerostipes_hadrus" "diagnosis" "UC" "diagnosisUC" 1.07483222603067 0.181303792468847 0.000303132109205073 0.00137429267143089 0.000606172329334515 0.00176828171209185 "abundance" 1527 1128 +"Prevotella_stercorea" "diagnosis" "UC" "diagnosisUC" 2.74624531629267 0.760707805542669 0.000306057157865497 0.00138434186682681 0.000306057157865497 0.00100651982800861 "prevalence" 1527 40 +"Bacteroides_cellulosilyticus" "age" "age" "age" 0.674522588823628 0.15763586802519 0.000310900539584047 0.0013997687888185 0.000310900539584047 0.001013305462348 "abundance" 1527 433 +"Bacteroides_fragilis" "diagnosis" "UC" "diagnosisUC" 1.41625668161315 0.309045775307731 0.00032598546086593 0.00146095318929364 0.00032598546086593 0.00105920198976745 "abundance" 1527 787 +"Dysosmobacter_welbionis" "diagnosis" "CD" "diagnosisCD" 0.726470217307065 0.148905237438522 0.000331682160438551 0.0014830822459884 0.000331682160438551 0.00107440601663531 "abundance" 1527 1191 +"GGB9480_SGB14874" "age" "age" "age" 0.221875569547985 0.0618341182827936 0.000332919561841973 0.0014852164927836 0.000665728288249288 0.00193134360547046 "prevalence" 1527 332 +"Alistipes_onderdonkii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -3.48716442843928 0.973457515081269 0.000340652590122119 0.00151280718431505 0.000681189136057081 0.00196539816304994 "prevalence" 1527 831 +"Gemmiger_formicilis" "reads" "reads" "reads" 0.215638408537457 0.0603018300757237 0.000348912350471656 0.00154597445084266 0.000697702961115 0.00200755947394398 "prevalence" 1527 472 +"Faecalibacterium_SGB15346" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.38948382908166 0.847724451804234 0.000353660800112565 0.00156346878601799 0.000353660800112565 0.00113861525889899 "abundance" 1527 743 +"Enterocloster_clostridioformis" "diagnosis" "UC" "diagnosisUC" -1.95700464645258 0.521553298374828 0.000360647680674564 0.00159075748992799 0.000360647680674564 0.0011575803975451 "abundance" 1527 312 +"Proteus_mirabilis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 3.55034294781035 0.984777650626205 0.000364411575746848 0.00159654757625413 0.000364411575746848 0.00116611704238991 "abundance" 1527 100 +"Lacrimispora_amygdalina" "diagnosis" "CD" "diagnosisCD" -0.510393258172025 0.143153047016026 0.000363346337378875 0.00159654757625413 0.000726560654196863 0.00208480444870238 "prevalence" 1527 865 +"Parasutterella_excrementihominis" "antibiotics" "Yes" "antibioticsYes" 0.671596441988823 0.188403561594988 0.000364314867193036 0.00159654757625413 0.000728497009063615 0.00208480444870238 "prevalence" 1527 699 +"Clostridiaceae_bacterium_Marseille_Q4149" "age" "age" "age" 0.262253570368607 0.073639385439535 0.000368992091683664 0.00160939854274527 0.000737848028203604 0.00210018198863344 "prevalence" 1527 181 +"Bacteroides_ovatus" "age" "age" "age" -0.47019763675327 0.0763949361847589 0.000372172570214824 0.00161965523875226 0.000372172570214824 0.00118377781369534 "abundance" 1527 1176 +"Prevotella_copri_clade_E" "diagnosis" "UC" "diagnosisUC" 2.70924576724738 0.761724492129047 0.000375504583335791 0.00163052434630697 0.000375504583335791 0.00118722407186406 "prevalence" 1527 38 +"Gemmiger_formicilis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.00807247892344 0.284048217522293 0.00038677280249421 0.00167572961435407 0.000144984562248086 0.000508650158584648 "prevalence" 1527 472 +"Flavonifractor_plautii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.19597875114324 0.302517221198155 0.000390278165699476 0.00168595598730673 1.10492193897814e-05 5.42696543051588e-05 "abundance" 1527 1224 +"Enterocloster_clostridioformis" "diagnosis" "CD" "diagnosisCD" 0.609314932449112 0.171822888983962 0.000390858783137129 0.00168595598730673 0.000781564795685902 0.00221863554904385 "prevalence" 1527 312 +"Dorea_longicatena" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.21863873783979 0.344072650215302 0.000397396924616248 0.00171038235837037 0.000794635924916801 0.00224969312791459 "prevalence" 1527 1020 +"Clostridium_sp_AF20_17LB" "diagnosis" "CD" "diagnosisCD" 1.04201474307876 0.266450371776517 0.000405299122524627 0.00174055930860027 0.000405299122524627 0.00127001742844512 "abundance" 1527 654 +"Veillonella_dispar" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.86436618006826 0.529541840315173 0.000416383311675816 0.00178423901538277 0.000416383311675816 0.00129323757979312 "abundance" 1527 526 +"Enterocloster_clostridioformis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.74305271697137 0.483470288388078 0.000419011050451501 0.00179157022446878 0.000419011050451501 0.00129758260784981 "abundance" 1527 312 +"Coprococcus_eutactus" "diagnosis" "UC" "diagnosisUC" -0.711114895476551 0.201898537356607 0.000428078162690281 0.00182634220501487 0.000498965111513658 0.00149265483784256 "prevalence" 1527 177 +"Bacteroides_xylanisolvens" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.81088491407281 0.690682504778699 0.000435509216188956 0.00185399783972379 0.000435509216188956 0.00133303690520446 "abundance" 1527 959 +"Alistipes_dispar" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 8.42522005007377 2.17411942815472 0.000451293465955072 0.00191701615755698 0.000451293465955072 0.00137338876094685 "abundance" 1527 83 +"Bacteroides_finegoldii" "diagnosis" "CD" "diagnosisCD" -1.84852215380658 0.47598965824883 0.000465042270612392 0.00196686709259008 0.000465042270612392 0.00140711930592174 "abundance" 1527 333 +"Veillonella_parvula" "diagnosis" "CD" "diagnosisCD" -0.48816432744216 0.139865922478958 0.000482603854743473 0.00203673419474891 0.000964974803006334 0.00270295329436257 "prevalence" 1527 547 +"Akkermansia_muciniphila" "antibiotics" "Yes" "antibioticsYes" -0.87065035361757 0.249621714411708 0.000486868226477776 0.00205030283305512 0.000973499412285599 0.00271961740575024 "prevalence" 1527 407 +"Bacteroides_finegoldii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.63840429575321 0.47009056105271 0.000491594691262514 0.00206575489618699 0.00098294771718455 0.00273695200294155 "prevalence" 1527 333 +"Coprococcus_comes" "diagnosis" "CD" "diagnosisCD" 0.822823377664088 0.195055591884174 0.000498573127483581 0.0020905834573024 0.000996897679803714 0.00276305498654258 "abundance" 1527 759 +"Bacteroides_caecigallinarum" "diagnosis" "CD" "diagnosisCD" -2.50658430474213 0.721791681954448 0.000515202199744999 0.00215568543533561 0.00103013896618338 0.00284771400075823 "prevalence" 1527 21 +"Bacteroides_xylanisolvens" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.24846532299045 0.360174744504603 0.00052771989247335 0.00220334331173702 0.00105516129666179 0.00289415669941519 "prevalence" 1527 959 +"Clostridium_sp_AF34_10BH" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.27976035627575 0.370859601150429 0.000558938512843368 0.00232375713637434 0.0011175646134256 0.0030494786350838 "prevalence" 1527 960 +"Bacteroides_intestinalis" "antibiotics" "Yes" "antibioticsYes" 2.41946883382016 0.686244191669798 0.000562491582260627 0.00233356380411309 0.000562491582260627 0.00165919304711515 "abundance" 1527 158 +"Bacteroides_xylanisolvens" "diagnosis" "CD" "diagnosisCD" 0.503283914281414 0.146376084660058 0.000585393218228407 0.00242342870427607 0.00117044375123687 0.00317235770359829 "prevalence" 1527 959 +"Bacteroides_fragilis" "reads" "reads" "reads" 0.187166081151213 0.0544729106864553 0.000590484591293322 0.00243933803675931 0.00118062051053409 0.00318858122538107 "prevalence" 1527 787 +"Bacteroides_fragilis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 2.68764252368257 0.625349070834963 0.000635515979849899 0.00261431205184569 0.000635515979849899 0.00184877375956334 "abundance" 1527 787 +"Roseburia_faecis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.725760070270049 0.212454346546131 0.000635306497482726 0.00261431205184569 0.00127020938061971 0.00342178853554697 "prevalence" 1527 922 +"Bacteroides_faecis" "age" "age" "age" -0.70408959031634 0.173084272662276 0.000669293427544293 0.00274747764164191 0.00133813890139643 0.00358648395907267 "abundance" 1527 434 +"Veillonella_dispar" "reads" "reads" "reads" -0.8474824389438 0.144217762065846 0.000676283219559037 0.00277035096649551 0.00135210908012502 0.00361475237623296 "abundance" 1527 526 +"Haemophilus_parainfluenzae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.44160472941804 0.41144085031653 0.00067911347063454 0.00277572636031592 0.00067911347063454 0.00196477760271253 "abundance" 1527 674 +"Lachnospira_eligens" "diagnosis" "CD" "diagnosisCD" -0.479515379786358 0.141144240322157 0.000680436502861476 0.00277572636031592 0.00136041001188853 0.00362776003170274 "prevalence" 1527 929 +"Veillonella_rogosae" "antibiotics" "Yes" "antibioticsYes" 2.97688990630541 0.866578125099345 0.000684196229726153 0.00278524881851021 0.00136792433497153 0.00363860981795955 "abundance" 1527 207 +"Ruminococcus_lactaris" "reads" "reads" "reads" 0.214902277909235 0.0633174377124765 0.000688681962727769 0.00279768098787954 0.00137688964260975 0.00365325493114547 "prevalence" 1527 379 +"Lacrimispora_celerecrescens" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.21773345326398 0.359289601089566 0.000700761345916478 0.00284084578821742 0.00140103162536903 0.00370799347466088 "prevalence" 1527 756 +"Alistipes_shahii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.42689923442668 0.717213197294878 0.000714925207347089 0.00288628895693432 0.00142933929664208 0.00376404562906243 "prevalence" 1527 673 +"Roseburia_intestinalis" "diagnosis" "CD" "diagnosisCD" -0.456856410980612 0.135009917500843 0.000714710611059719 0.00288628895693432 0.00142891041086188 0.00376404562906243 "prevalence" 1527 842 +"Klebsiella_pneumoniae" "antibiotics" "Yes" "antibioticsYes" 2.28833690779229 0.657051044551174 0.000732769544661172 0.00295223028921223 0.000732769544661172 0.00209136388962756 "abundance" 1527 119 +"Dialister_invisus" "diagnosis" "CD" "diagnosisCD" 0.460286862394229 0.13673452646092 0.000761890045223613 0.00305694691656456 0.00152319961400621 0.00397160195651991 "prevalence" 1527 726 +"Alistipes_communis" "antibiotics" "Yes" "antibioticsYes" -0.82402146602407 0.24495148070921 0.000768162196678543 0.00307579699243826 0.00153573432019668 0.00399442227125048 "prevalence" 1527 407 +"Odoribacter_splanchnicus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.41691931849783 0.718891272074805 0.000773774488551143 0.00309193323237001 0.00154695025014315 0.00401370875712818 "prevalence" 1527 757 +"Dorea_longicatena" "diagnosis" "UC" "diagnosisUC" 1.01084371424559 0.183756807723305 0.000779510740035794 0.00310849793067335 0.00155841384307776 0.00403354171149537 "abundance" 1527 1020 +"Bifidobacterium_longum" "diagnosis" "UC" "diagnosisUC" 0.522993620529097 0.155926373969969 0.000796217921898671 0.00316539033141076 0.00159180188081819 0.00410988456269929 "prevalence" 1527 843 +"Hungatella_hathewayi" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.75123713130778 0.523518263925116 0.000816192607498989 0.0032349702942252 0.000816192607498989 0.00230454383293832 "abundance" 1527 451 +"Phocaeicola_vulgatus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.22415366679984 0.746106637182405 0.000825236499762849 0.00326419457598504 1.60282233732381e-09 1.59677395114523e-08 "abundance" 1527 1288 +"Alistipes_finegoldii" "reads" "reads" "reads" 0.0511156786894734 0.11237319429844 0.000828935177595302 0.00327220068085095 0.00165718322166195 0.00426825727335371 "abundance" 1527 639 +"Bacteroides_caecigallinarum" "diagnosis" "UC" "diagnosisUC" -9.25765879697053 2.1962099671036 0.000843784533191672 0.00332410277793654 0.000843784533191672 0.00237609724546775 "abundance" 1527 21 +"Alistipes_onderdonkii" "diagnosis" "UC" "diagnosisUC" -1.05480190336612 0.264535640247404 0.000846102085366285 0.00332652610624893 1.29707804661965e-12 2.32154985971247e-11 "abundance" 1527 831 +"Alistipes_putredinis" "reads" "reads" "reads" 0.197489217865503 0.0592843730436551 0.000864666111271453 0.00339268590647474 0.00172858457505892 0.00444132679139227 "prevalence" 1527 873 +"Oscillospiraceae_bacterium" "diagnosis" "CD" "diagnosisCD" -3.76189120643333 1.05140533691426 0.000866748620027114 0.00339404169044685 0.000866748620027114 0.00243427272007615 "abundance" 1527 81 +"Bilophila_wadsworthia" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -3.24881407961947 0.9765835074996 0.000878764979712131 0.00343421354071501 0.00175675773153469 0.00450275768082679 "prevalence" 1527 764 +"Phocaeicola_vulgatus" "reads" "reads" "reads" 0.2665951953201 0.0804470105204946 0.00091996850631139 0.00358806080106279 0.00183909067057018 0.00469101388435291 "prevalence" 1527 1288 +"Anaerostipes_hadrus" "diagnosis" "CD" "diagnosisCD" 0.702187513791281 0.16555995296865 0.000953524582677723 0.00371152795727544 0.00190613995622567 0.00483181207131888 "abundance" 1527 1128 +"Phocaeicola_coprocola" "antibiotics" "Yes" "antibioticsYes" -4.65771243634665 1.33641953188971 0.000984888031361542 0.00382598650751581 0.000984888031361542 0.00273695200294155 "abundance" 1527 101 +"Bifidobacterium_adolescentis" "reads" "reads" "reads" 0.202107000531627 0.0614038056271251 0.000996755390769417 0.00386440482849889 0.0019925172602298 0.0050337278153174 "prevalence" 1527 427 +"Akkermansia_sp_KLE1798" "reads" "reads" "reads" 0.412925251012344 0.125964249642892 0.00104502944414029 0.00404353967099034 0.00104502944414029 0.0028813344465069 "prevalence" 1527 70 +"Rikenellaceae_bacterium" "reads" "reads" "reads" 0.385597912720216 0.117697714751368 0.00105224598932845 0.00406341633033161 0.00105224598932845 0.00289367647065324 "prevalence" 1527 67 +"Dysosmobacter_sp_BX15" "diagnosis" "UC" "diagnosisUC" -0.908925291546277 0.21231440651139 0.00106117260879401 0.00408980528122979 0.00106117260879401 0.00290310433908414 "abundance" 1527 621 +"Parabacteroides_merdae" "reads" "reads" "reads" 0.183645161479421 0.0562396458028206 0.00109308070476709 0.00420448759274587 0.000529487774738112 0.00157061542169507 "prevalence" 1527 826 +"Blautia_faecis" "diagnosis" "UC" "diagnosisUC" 0.985099908440974 0.186338217523062 0.00116503646162158 0.00446368871766387 0.00116503646162158 0.00317082088523812 "abundance" 1527 1125 +"Barnesiella_intestinihominis" "diagnosis" "UC" "diagnosisUC" -1.17086640723304 0.317402125223715 0.00117160937916982 0.00448008752817581 0.00117160937916982 0.00317235770359829 "abundance" 1527 431 +"Barnesiella_intestinihominis" "reads" "reads" "reads" 0.197166952927147 0.0608028349271168 0.00118391877945646 0.00451831502941001 0.00236643589523658 0.00593576319565279 "prevalence" 1527 431 +"Lacrimispora_amygdalina" "diagnosis" "UC" "diagnosisUC" 0.986860517188179 0.189448128602327 0.00125687764923321 0.00478740531501305 0.00251217555704128 0.00627153046864207 "abundance" 1527 865 +"Phocaeicola_coprocola" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -5.43951613104222 1.55531397154633 0.00130381502800769 0.00495652639051952 0.00130381502800769 0.00350338083861609 "abundance" 1527 101 +"Gemmiger_formicilis" "diagnosis" "UC" "diagnosisUC" 1.41311680532243 0.359623110823362 0.00134607910625961 0.00510725936627433 3.29090158602225e-18 1.51095307601717e-16 "abundance" 1527 472 +"Ruminococcus_lactaris" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.62828160042399 0.508196573016178 0.00135514154886645 0.00513167943117257 0.00270844668911544 0.00672969342048447 "prevalence" 1527 379 +"Eisenbergiella_massiliensis" "age" "age" "age" -0.645263171903296 0.167569159722009 0.00136106227453936 0.0051427066883951 0.00272027205856354 0.00673855617146329 "abundance" 1527 417 +"Acidaminococcus_intestini" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.19105518746046 0.371936630623385 0.00136331733090515 0.0051427066883951 0.00272477602766555 0.00673855617146329 "prevalence" 1527 173 +"GGB51647_SGB4348" "diagnosis" "CD" "diagnosisCD" -0.757685657429426 0.237166280643177 0.00139954708443747 0.0052692003911191 0.00279713543683338 0.00688525645989755 "prevalence" 1527 123 +"Faecalibacterium_SGB15346" "reads" "reads" "reads" -0.677771574747064 0.0997199563784619 0.00141773800934475 0.00532742321203777 9.04464133558481e-07 5.45779500021575e-06 "abundance" 1527 743 +"Prevotella_copri_clade_A" "diagnosis" "CD" "diagnosisCD" -2.35933982557948 0.693761566251755 0.00145654100494086 0.00546272768455746 0.00145654100494086 0.00382613756521778 "abundance" 1527 289 +"Clostridium_symbiosum" "reads" "reads" "reads" -0.730097916378607 0.1172565472815 0.0014908508440894 0.00558069453898598 0.000306184301925268 0.00100651982800861 "abundance" 1527 539 +"Flavonifractor_plautii" "diagnosis" "UC" "diagnosisUC" 0.973165906990073 0.190163231187916 0.00150522083077509 0.00562371224346945 0.00150522083077509 0.00394420148213026 "abundance" 1527 1224 +"GGB781_SGB1024" "age" "age" "age" 0.597901481558168 0.188585477367524 0.0015220120549902 0.00567559457147109 0.0015220120549902 0.00397160195651991 "prevalence" 1527 18 +"Roseburia_intestinalis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.58985898710281 0.507254289420778 0.00155639391969564 0.00578295304505672 0.00311036547735802 0.00760471334991649 "abundance" 1527 842 +"Dysosmobacter_sp_BX15" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.68584099793922 0.532836955014156 0.00155672123935508 0.00578295304505672 0.00311101909769311 0.00760471334991649 "prevalence" 1527 621 +"Clostridium_fessum" "diagnosis" "CD" "diagnosisCD" 0.67137921819731 0.16779022104 0.00163855759830611 0.00605244148788307 0.00327443032560926 0.00794536465955607 "abundance" 1527 926 +"GGB3278_SGB4328" "age" "age" "age" -0.728869247620569 0.1992961753015 0.00164490287940855 0.00606441552144209 0.00328710005333441 0.00794536465955607 "abundance" 1527 179 +"Parabacteroides_distasonis" "reads" "reads" "reads" 0.21105267102682 0.0671064031422598 0.00166061171568284 0.00611080092739032 1.40529247422004e-05 6.6846344719656e-05 "prevalence" 1527 1140 +"Clostridium_leptum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.35020627711784 0.430179297304256 0.00169695698008208 0.00623280815616613 0.00339103429717191 0.00817564433290761 "prevalence" 1527 652 +"Clostridium_fessum" "antibiotics" "Yes" "antibioticsYes" -0.620302436468447 0.197763036309295 0.00170922390049572 0.0062660853687967 0.00341552635464942 0.00821593583259632 "prevalence" 1527 926 +"Lacrimispora_celerecrescens" "diagnosis" "CD" "diagnosisCD" 0.732287842437289 0.195001671709707 0.00171662266548012 0.00628142451001526 0.00343029853758459 0.00823271649020303 "abundance" 1527 756 +"Phocaeicola_massiliensis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.88184009670347 0.60079533332318 0.00173473161774409 0.00633582351602233 0.00346645394170257 0.00830062440462113 "prevalence" 1527 396 +"Haemophilus_parainfluenzae" "diagnosis" "CD" "diagnosisCD" -0.427382359582138 0.13662395084158 0.00175900972321885 0.00641250932680903 0.00351492533123133 0.00839764966013639 "prevalence" 1527 674 +"Firmicutes_bacterium_AF16_15" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.62860729790535 0.724813113283401 0.00177036891751259 0.00644190105180558 0.00177036891751259 0.0045266575711702 "abundance" 1527 827 +"Bilophila_wadsworthia" "age" "age" "age" 0.175667007624568 0.0562460905257548 0.00178904592586695 0.00649776159692197 0.00357489116640904 0.00852163673076286 "prevalence" 1527 764 +"Faecalibacterium_SGB15315" "diagnosis" "CD" "diagnosisCD" 1.00170787604472 0.300398364348115 0.00179272887625292 0.00649905792986682 1.42418978334276e-07 9.89437112638125e-07 "abundance" 1527 619 +"Waltera_intestinalis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.24088266055823 0.718522170006555 0.00181627160614829 0.00657221244150696 0.00362924436974928 0.00863073459032252 "prevalence" 1527 524 +"Alistipes_dispar" "diagnosis" "UC" "diagnosisUC" -1.11107653635077 0.356330317747212 0.00182015880565515 0.00657410407809643 0.0036370046332325 0.00863073459032252 "prevalence" 1527 83 +"Clostridiales_bacterium" "diagnosis" "UC" "diagnosisUC" 0.970929077647199 0.197344770075583 0.0018443445017774 0.00664916818537459 0.000306912296040503 0.00100651982800861 "abundance" 1527 985 +"GGB9480_SGB14874" "diagnosis" "UC" "diagnosisUC" -0.557245652453744 0.179180439257014 0.00187106835098147 0.00673308942507881 0.0037386358051889 0.00883221344581538 "prevalence" 1527 332 +"Flavonifractor_plautii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.13877289081272 0.366330794961511 0.00187981262555586 0.00675212108517675 0.00375609155560453 0.00885364438106781 "prevalence" 1527 1224 +"Alistipes_SGB2313" "diagnosis" "CD" "diagnosisCD" -2.82919491499376 0.83704449068019 0.00189421173938842 0.00679135731883481 0.00189421173938842 0.00481997011275704 "abundance" 1527 73 +"Acidaminococcus_intestini" "age" "age" "age" 0.628640123994917 0.173940046285072 0.0019080166986174 0.00682832349651721 0.0019080166986174 0.00483181207131888 "abundance" 1527 173 +"Ruminococcus_gnavus" "diagnosis" "UC" "diagnosisUC" 0.454542575943244 0.146644266276263 0.00193764270623465 0.00692167065444698 0.00387153095321227 0.00908519263687146 "prevalence" 1527 767 +"Bifidobacterium_adolescentis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.86768566310464 0.602981728629596 0.00195215265991962 0.00696077791511484 0.0039004944198316 0.00913286498302034 "prevalence" 1527 427 +"GGB3746_SGB5089" "age" "age" "age" 0.169762473431765 0.0549106493136804 0.00199072243622357 0.00708537639413635 0.00397748189662906 0.00928900713003187 "prevalence" 1527 651 +"Akkermansia_muciniphila" "reads" "reads" "reads" 0.192850943047368 0.0623897316454088 0.00199437523878918 0.00708547130289828 0.00398477294498526 0.00928900713003187 "prevalence" 1527 407 +"Alistipes_SGB2313" "age" "age" "age" 1.01314763057845 0.301534940486659 0.00203911772245435 0.00723128136057315 0.00203911772245435 0.00513641051154549 "abundance" 1527 73 +"Eubacterium_siraeum" "diagnosis" "CD" "diagnosisCD" -1.1895434121501 0.322024454920504 0.00204289054436468 0.0072315364559576 0.00204289054436468 0.00513641051154549 "abundance" 1527 565 +"Proteus_mirabilis" "diagnosis" "CD" "diagnosisCD" -0.873786730816911 0.283719019169888 0.00207166861351202 0.00731986294810237 0.00413904541617983 0.00962320605362848 "prevalence" 1527 100 +"Vescimonas_coprocola" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.85343745822895 0.60191506862446 0.00207533473554182 0.00731986294810237 0.00414636245681909 0.00962320605362848 "prevalence" 1527 599 +"Bacteroides_faecis" "antibiotics" "Yes" "antibioticsYes" -0.736943327102936 0.240455022862302 0.00217825374471052 0.00765522988698625 0.00435176270004469 0.0100777662527351 "prevalence" 1527 434 +"Clostridium_sp_AM49_4BH" "antibiotics" "Yes" "antibioticsYes" -1.04578887688662 0.342126127192435 0.00223762069944687 0.00784975017364305 0.00447023445249914 0.0103069161175526 "prevalence" 1527 344 +"Clostridium_sp_AM22_11AC" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.16305274325259 0.381293971386422 0.00228629372051273 0.00800612532236893 0.00456736030204899 0.0104623264185764 "prevalence" 1527 730 +"Veillonella_rogosae" "reads" "reads" "reads" -0.987038692209321 0.206638684509606 0.00232261508455278 0.00811876542972475 0.00463983562827457 0.0106053385789133 "abundance" 1527 207 +"Prevotella_copri_clade_B" "antibiotics" "Yes" "antibioticsYes" -8.33580594491399 2.51293171858804 0.00244417061563196 0.00852840961240151 0.00244417061563196 0.00611621841257665 "abundance" 1527 40 +"Proteus_mirabilis" "age" "age" "age" -0.382273989701253 0.126302070097045 0.00247268250749862 0.00859719149404325 0.00493925085621435 0.0111449762909452 "prevalence" 1527 100 +"Bacteroides_eggerthii" "diagnosis" "UC" "diagnosisUC" -0.467010999839612 0.154957566489991 0.00257998448995004 0.00895433338075023 0.00515331265993169 0.0115785067423146 "prevalence" 1527 409 +"Coprococcus_comes" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.41985253033313 0.683615033007543 0.00260253861603033 0.00901659655270081 3.01317475555352e-13 6.00360856955569e-12 "abundance" 1527 759 +"Bifidobacterium_longum" "reads" "reads" "reads" 0.171390884254706 0.0569545671530483 0.0026188817249767 0.00905715909841498 0.00523090490846398 0.0117030414901228 "prevalence" 1527 843 +"Firmicutes_bacterium_AF16_15" "age" "age" "age" -0.434884190155522 0.094790576811539 0.00265955484226366 0.00918157272399856 0.00265955484226366 0.00662379696563778 "abundance" 1527 827 +"Bacteroides_eggerthii" "diagnosis" "CD" "diagnosisCD" -1.86089622213395 0.572640486126323 0.00278807611162935 0.00960829051520942 0.00278807611162935 0.00687899152775838 "abundance" 1527 409 +"Waltera_intestinalis" "reads" "reads" "reads" 0.175197377698146 0.0586067627736804 0.00279552142081576 0.0096169874230176 0.00558322790161728 0.0124123971875955 "prevalence" 1527 524 +"Bifidobacterium_longum" "reads" "reads" "reads" -0.645258471842442 0.0958688075993317 0.00280133492296541 0.00962004998150162 0.00523090490846398 0.0117030414901228 "abundance" 1527 843 +"Lacrimispora_celerecrescens" "diagnosis" "CD" "diagnosisCD" -0.402784182290975 0.13507736159666 0.00286486349855442 0.00982095311609708 0.00343029853758459 0.00823271649020303 "prevalence" 1527 756 +"Phascolarctobacterium_faecium" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.8048831732242 0.606113506383881 0.00290327905117981 0.00993521412610394 0.0057981290731106 0.0128630762630353 "prevalence" 1527 503 +"Ruminococcus_torques" "diagnosis" "UC" "diagnosisUC" -0.519431997059409 0.174759627772519 0.00295611016977075 0.0100806968093055 0.00590348175220569 0.0130420015278854 "prevalence" 1527 1093 +"Bacteroides_salyersiae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -4.06797161612191 1.25041508147328 0.0030264453727864 0.010302568394468 0.0030264453727864 0.00743238677595916 "abundance" 1527 150 +"Roseburia_intestinalis" "antibiotics" "Yes" "antibioticsYes" -1.52209996077066 0.456273166996647 0.00311982917327258 0.0106019933992602 0.00311982917327258 0.00760863650571789 "abundance" 1527 842 +"Bacteroides_eggerthii" "reads" "reads" "reads" -1.01722813006797 0.225197961726242 0.00313744497598156 0.0106433463247708 2.7885861677675e-16 8.92347573685599e-15 "abundance" 1527 409 +"GGB3746_SGB5089" "age" "age" "age" -0.445833167043828 0.104067181751869 0.00320317319568852 0.010847487737219 0.00397748189662906 0.00928900713003187 "abundance" 1527 651 +"Prevotella_marseillensis" "antibiotics" "Yes" "antibioticsYes" 1.6015386782121 0.543487698911721 0.00321101570158716 0.01085523301194 0.00321101570158716 0.00781297829694941 "prevalence" 1527 18 +"Waltera_intestinalis" "antibiotics" "Yes" "antibioticsYes" -0.671983288414042 0.22835674104145 0.0032537318017148 0.0109806423843708 0.00649687683279211 0.0143229685499551 "prevalence" 1527 524 +"Phocaeicola_coprocola" "age" "age" "age" 0.288221614285034 0.0979814211831849 0.00326527146364335 0.0110005869654467 0.00651988092955542 0.0143437380450219 "prevalence" 1527 101 +"Faecalibacterium_SGB15315" "antibiotics" "Yes" "antibioticsYes" -1.88060140891517 0.588204894913948 0.00328799654945644 0.0110580813384473 0.00328799654945644 0.00794536465955607 "abundance" 1527 619 +"Alistipes_finegoldii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.8611804707438 0.974375008781884 0.00332017628228933 0.0111471210577205 0.00662932899403318 0.0145542025315988 "prevalence" 1527 639 +"Eisenbergiella_massiliensis" "reads" "reads" "reads" 0.172819080445969 0.0590642027298423 0.00343402826865653 0.0114898822550597 0.00685626398716313 0.0149900926924312 "prevalence" 1527 417 +"Bifidobacterium_adolescentis" "diagnosis" "UC" "diagnosisUC" 1.19782146941379 0.32153296514993 0.00351303613788012 0.0117341412195175 0.00701373085285419 0.0153026854971364 "abundance" 1527 427 +"Phocaeicola_sartorii" "antibiotics" "Yes" "antibioticsYes" 0.614659786097973 0.21069723951535 0.0035311506716262 0.0117644553816121 0.00704983231818668 0.0153307488421677 "prevalence" 1527 424 +"Ruminococcus_lactaris" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.84343253837617 0.974779618411158 0.00353415317758767 0.0117644553816121 0.00705581611649268 0.0153307488421677 "prevalence" 1527 379 +"Firmicutes_bacterium_AF16_15" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.26284043258983 0.433018444847858 0.00354134379949461 0.0117683431704294 0.00707014648308301 0.0153307488421677 "prevalence" 1527 827 +"Oscillibacter_sp_ER4" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.89092967014982 0.877880234335608 0.00370763344431835 0.0123000267405739 0.00370763344431835 0.00877861192197349 "abundance" 1527 458 +"Clostridium_fessum" "diagnosis" "CD" "diagnosisCD" -0.443311216319633 0.152888199671493 0.00373665703654525 0.012375301439677 0.00327443032560926 0.00794536465955607 "prevalence" 1527 926 +"Roseburia_intestinalis" "age" "age" "age" -0.445685506201694 0.108212834744494 0.00380356498687906 0.0125755769616949 0.00759266286714871 0.0163964253327383 "abundance" 1527 842 +"Clostridiaceae_bacterium" "antibiotics" "Yes" "antibioticsYes" -0.567509737215762 0.196193078268079 0.00382057373829299 0.0126104748051089 0.00762655069289624 0.0164359949626499 "prevalence" 1527 1109 +"Bacteroides_finegoldii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -9.30169738278743 3.32408739057974 0.0038273465136327 0.012611526286068 0.0038273465136327 0.00900150984052591 "abundance" 1527 333 +"Ruminococcus_torques" "antibiotics" "Yes" "antibioticsYes" 0.618877142149406 0.214105642417747 0.00384602196727594 0.0126517288283791 0.00767725204957911 0.0165004173429209 "prevalence" 1527 1093 +"Clostridium_sp_AM49_4BH" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.97080761732361 0.684432236225309 0.00398333994923592 0.0130814222870706 0.00795081290132067 0.0170305444701716 "prevalence" 1527 344 +"GGB3278_SGB4328" "antibiotics" "Yes" "antibioticsYes" -1.6148762487013 0.563550917171542 0.00416302050993476 0.0136256986204565 0.00830871028010338 0.0177611296675894 "prevalence" 1527 179 +"Lacrimispora_amygdalina" "antibiotics" "Yes" "antibioticsYes" -0.55428480878037 0.194035093296158 0.00428176166272778 0.0139909068377426 0.00854518984251916 0.0181929848260085 "prevalence" 1527 865 +"Eubacterium_ventriosum" "reads" "reads" "reads" 0.164626087452278 0.0576668238933745 0.00430666691861234 0.0140277527347925 0.00859478645727681 0.0182281677363277 "prevalence" 1527 520 +"GGB16040_SGB9347" "reads" "reads" "reads" 0.287985682267943 0.100880319915939 0.00430739592675308 0.0140277527347925 0.00859623819383635 0.0182281677363277 "prevalence" 1527 114 +"Sutterella_wadsworthensis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.687261158485273 0.240897196267636 0.0043319112876119 0.0140841175640493 4.17520462211948e-09 3.83392702692015e-08 "prevalence" 1527 536 +"Alistipes_dispar" "age" "age" "age" 0.834318195672868 0.268843862960625 0.00441702562422153 0.0143132140459848 0.00441702562422153 0.0102065187290546 "abundance" 1527 83 +"Ruminococcus_gnavus" "age" "age" "age" -0.455783027072586 0.11729792613662 0.00449355217962244 0.0145370876804342 0.00449355217962244 0.0103381069753405 "abundance" 1527 767 +"Veillonella_dispar" "diagnosis" "CD" "diagnosisCD" -1.14883126291918 0.342442979834846 0.00450797676874748 0.0145596472828638 0.00450797676874748 0.0103487466691246 "abundance" 1527 526 +"Blautia_wexlerae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.955682162364022 0.323520811882202 0.00452463751345822 0.0145893427414148 2.21309154186332e-12 3.89504111367943e-11 "abundance" 1527 1302 +"Roseburia_hominis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.43815500134048 0.523543996024055 0.004580115297939 0.0147438966922122 1.38266063927039e-07 9.66946778191744e-07 "abundance" 1527 876 +"Eubacterium_rectale" "age" "age" "age" -0.357023266880052 0.0650222142979865 0.00466826124225916 0.0150029316897605 0.00931472982149235 0.0195165767688411 "abundance" 1527 1211 +"Roseburia_faecis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.05188751110975 0.372290417256363 0.00472144335884874 0.0151489332072093 0.00942059469030667 0.0196603715275965 "prevalence" 1527 922 +"Veillonella_rogosae" "antibiotics" "Yes" "antibioticsYes" -0.965144576738809 0.341721633351636 0.00473752852010912 0.015175624144743 0.00136792433497153 0.00363860981795955 "prevalence" 1527 207 +"Prevotella_sp_885" "antibiotics" "Yes" "antibioticsYes" -4.3909764884284 1.46382111242141 0.0047738299990927 0.0152419343435084 0.0047738299990927 0.010888044231192 "abundance" 1527 69 +"Proteus_mirabilis" "antibiotics" "Yes" "antibioticsYes" 2.78438021113624 0.972399460133818 0.00476962629862476 0.0152419343435084 0.009516503262221 0.0198213559071112 "abundance" 1527 100 +"Clostridium_leptum" "diagnosis" "CD" "diagnosisCD" -0.889688584395612 0.239817803814506 0.00478701791284752 0.0152591076699903 0.00478701791284752 0.0108945924913082 "abundance" 1527 652 +"Alistipes_finegoldii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.73426733432674 0.849757772766326 0.00486735339586319 0.0154899161816233 0.00486735339586319 0.0110536025506054 "abundance" 1527 639 +"Coprococcus_eutactus" "antibiotics" "Yes" "antibioticsYes" -2.98227908026923 1.0057404733134 0.00488425262321102 0.0154932299119388 0.00488425262321102 0.0110681776182636 "abundance" 1527 177 +"GGB9453_SGB14844" "reads" "reads" "reads" -0.92770714868441 0.203627536170018 0.00487719627331196 0.0154932299119388 0.0097306055031355 0.020187660925955 "abundance" 1527 222 +"Ruminococcus_gnavus" "reads" "reads" "reads" 0.153023127407352 0.0543923293530308 0.00490325505380727 0.0155282988251854 0.00978246819749185 0.0202554635618655 "prevalence" 1527 767 +"Lachnospira_pectinoschiza" "antibiotics" "Yes" "antibioticsYes" -1.57181877729046 0.500974877159645 0.00493090673501873 0.0155906015537647 0.00493090673501873 0.0111449762909452 "abundance" 1527 500 +"Barnesiella_intestinihominis" "reads" "reads" "reads" 0.0409434918353003 0.1317338621782 0.00496644969383675 0.0156776134115622 0.00236643589523658 0.00593576319565279 "abundance" 1527 431 +"GGB3175_SGB4191" "age" "age" "age" 0.227245221355714 0.0809383300502997 0.00499068849610698 0.0157287182603114 0.00995647002054879 0.0205352194173819 "prevalence" 1527 154 +"Odoribacter_splanchnicus" "diagnosis" "UC" "diagnosisUC" -0.719567470398793 0.187054621299802 0.00500946433097615 0.0157556331387957 1.61414468324928e-13 3.47864650104334e-12 "abundance" 1527 757 +"Eubacterium_siraeum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.69078137792535 0.602549441577457 0.00501535507284079 0.0157556331387957 0.0100055563591749 0.0205704042775959 "prevalence" 1527 565 +"Escherichia_coli" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.984062434122636 0.350979737708979 0.00505107184072416 0.0158423665758828 0.0100766303547082 0.0206287496292087 "prevalence" 1527 707 +"Akkermansia_sp_KLE1798" "age" "age" "age" -0.396750610153537 0.141669785175242 0.00510186237066213 0.0159760241542849 0.00510186237066213 0.0114873489625143 "prevalence" 1527 70 +"Paraprevotella_clara" "reads" "reads" "reads" 0.223480796371935 0.0798630353384225 0.00513722447347099 0.0160610185938597 0.0102480578716512 0.0208917936534047 "prevalence" 1527 178 +"Alistipes_communis" "diagnosis" "UC" "diagnosisUC" -1.04396936930085 0.336672807497889 0.00519659045250531 0.0162206673229958 0.00519659045250531 0.0116509543903304 "abundance" 1527 407 +"Bacteroides_faecis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 5.21315256779639 1.69841158582695 0.00523275431820325 0.0163074991033001 0.0104381269186518 0.0212382697998002 "abundance" 1527 434 +"Lachnospira_eligens" "age" "age" "age" 0.365292455175661 0.0855309593908931 0.00526017003177948 0.0163668347804094 0.00526017003177948 0.0117436354197867 "abundance" 1527 929 +"Paraprevotella_clara" "age" "age" "age" -0.888549500662772 0.292987793147534 0.0052955936479363 0.0164247460128056 0.0052955936479363 0.0117977782536302 "abundance" 1527 178 +"Clostridiales_bacterium" "diagnosis" "CD" "diagnosisCD" -0.433428098313165 0.155407090721612 0.00528734577488256 0.0164247460128056 0.010546735524422 0.0214179859880569 "prevalence" 1527 985 +"GGB3278_SGB4328" "reads" "reads" "reads" 0.229378859347618 0.082302587625905 0.00531953921090512 0.0164728678575414 0.0106107809243939 0.0215066883995393 "prevalence" 1527 179 +"Dialister_invisus" "reads" "reads" "reads" 0.153440623898114 0.055071411926408 0.00533279967288228 0.0164878015202721 0.0106371605934135 0.0215188536142617 "prevalence" 1527 726 +"Bacteroides_thetaiotaomicron" "antibiotics" "Yes" "antibioticsYes" 0.990784258691301 0.33881738872896 0.00535148566475918 0.0165194360014841 0.0106743329306982 0.0215527640053869 "abundance" 1527 1062 +"Anaerostipes_hadrus" "age" "age" "age" -0.359174703358718 0.0705624078577755 0.00553373587309336 0.017055078700354 1.1520707008429e-08 9.65544968325479e-08 "abundance" 1527 1128 +"GGB9480_SGB14874" "age" "age" "age" -0.448215704513962 0.117424035279522 0.00555195725918312 0.0170842905266832 0.000665728288249288 0.00193134360547046 "abundance" 1527 332 +"GGB3304_SGB4367" "diagnosis" "CD" "diagnosisCD" -0.606766374100676 0.219133532957709 0.00562399603427364 0.0172527219787818 0.0112163627371538 0.0225180210084304 "prevalence" 1527 155 +"Lachnospira_sp_NSJ_43" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.89597990285614 0.687885382416774 0.00584693763882703 0.01790739207879 0.0116596885979017 0.0233636264883951 "prevalence" 1527 296 +"Bacteroides_ovatus" "diagnosis" "CD" "diagnosisCD" 0.622633245142379 0.189791800469474 0.00585817453534832 0.0179137293303139 0.00585817453534832 0.0129690404807711 "abundance" 1527 1176 +"Bacteroides_faecis" "reads" "reads" "reads" -0.840620193771603 0.177232853884928 0.00591687866549928 0.0180649701756025 1.49150348267135e-19 9.84392298563089e-18 "abundance" 1527 434 +"Bacteroides_fragilis" "age" "age" "age" -0.146790055791703 0.0534540263281226 0.0060308535887731 0.0183842245124222 0.012025335982537 0.0239599147123756 "prevalence" 1527 787 +"Clostridium_leptum" "age" "age" "age" -0.403267452430045 0.0974686083894383 0.00604240436240966 0.0183907447416643 0.0120482980743405 0.0239604571873889 "abundance" 1527 652 +"Eisenbergiella_massiliensis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.4656261897321 0.946550413874363 0.00648989609768913 0.0196913928181437 1.89340354917707e-06 1.07496459566182e-05 "abundance" 1527 417 +"GGB9453_SGB14844" "diagnosis" "UC" "diagnosisUC" -1.28555218969861 0.449884881617189 0.00665071494091762 0.0201340330958157 0.0132571978726099 0.0261674784177123 "abundance" 1527 222 +"Prevotella_marseillensis" "diagnosis" "UC" "diagnosisUC" 2.13061285892261 0.785171675003674 0.00665638965194315 0.0201340330958157 0.00665638965194315 0.0145832935113111 "prevalence" 1527 18 +"Clostridium_sp_AT4" "age" "age" "age" 0.406722708422521 0.113266845672961 0.0067801043022917 0.0204765437506615 0.0135142387902334 0.0265754863361015 "abundance" 1527 528 +"Lacrimispora_amygdalina" "diagnosis" "CD" "diagnosisCD" 0.591059076649453 0.181006519437755 0.00697373412243429 0.0210288217210442 0.000726560654196863 0.00208480444870238 "abundance" 1527 865 +"Tyzzerella_nexilis" "antibiotics" "Yes" "antibioticsYes" -0.917649573320954 0.340848340987998 0.00709713308538971 0.0213679476869823 0.0141438968727477 0.0277619983227167 "prevalence" 1527 188 +"Blautia_wexlerae" "diagnosis" "CD" "diagnosisCD" 0.555055091290532 0.164425254186793 0.00712445399043626 0.0214172047650961 0.0141981501362107 0.0278167839403311 "abundance" 1527 1302 +"GGB9713_SGB15249" "reads" "reads" "reads" 0.128665210725218 0.171157721984502 0.00717757012789622 0.0215437358370341 0.0143036227428516 0.0279715289193542 "abundance" 1527 329 +"Eubacterium_ventriosum" "diagnosis" "UC" "diagnosisUC" -0.389741566908885 0.145161229035434 0.00725542269561765 0.0217440121890136 0.0144582042327432 0.0282215594635431 "prevalence" 1527 520 +"Dysosmobacter_sp_BX15" "reads" "reads" "reads" -0.082865223426728 0.090652206580022 0.00733191856384796 0.0219396154268896 0.000347678727029278 0.00112277900838813 "abundance" 1527 621 +"Eubacterium_siraeum" "reads" "reads" "reads" -0.754616951153923 0.149890647635663 0.00736880584542332 0.0220162792384666 0.0146833123912591 0.0286080772789107 "abundance" 1527 565 +"Eubacterium_siraeum" "diagnosis" "UC" "diagnosisUC" -1.07969264286485 0.374786597152551 0.00753779297446111 0.0224867900337359 0.00753779297446111 0.0163112897152273 "abundance" 1527 565 +"Ruminococcus_gnavus" "antibiotics" "Yes" "antibioticsYes" 0.491026118034568 0.18402909039978 0.0076259219327225 0.0226804436172599 0.015193689180121 0.0294395151820327 "prevalence" 1527 767 +"Parabacteroides_merdae" "age" "age" "age" -0.358177193709979 0.0783473360633534 0.00768769444386086 0.0227947722963644 0.00768769444386086 0.0165004173429209 "abundance" 1527 826 +"Bacteroides_caccae" "age" "age" "age" 0.154435030004957 0.0579927763895037 0.00774463565486071 0.0228351963755466 0.0154292919282949 0.0297455042124643 "prevalence" 1527 958 +"Eubacterium_siraeum" "reads" "reads" "reads" 0.154387725746803 0.0579703753180286 0.0077397338707715 0.0228351963755466 0.0146833123912591 0.0286080772789107 "prevalence" 1527 565 +"Proteus_mirabilis" "diagnosis" "UC" "diagnosisUC" -0.863168204247526 0.324151378480735 0.00774807328402629 0.0228351963755466 0.0154361139284379 0.0297455042124643 "prevalence" 1527 100 +"Roseburia_hominis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.997990612709832 0.374634967387024 0.00772401997093614 0.0228351963755466 0.0153883794573609 0.0297455042124643 "prevalence" 1527 876 +"Parabacteroides_merdae" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.28153209410581 0.976221128024451 0.00778163034507651 0.0228995567684932 4.88339250491291e-07 3.05139792022961e-06 "abundance" 1527 826 +"Dialister_invisus" "diagnosis" "UC" "diagnosisUC" -0.787776291046636 0.24492615430198 0.00782666435893065 0.0229974468531586 0.0155920720428739 0.0299913079731783 "abundance" 1527 726 +"Eisenbergiella_massiliensis" "diagnosis" "UC" "diagnosisUC" 0.440388680687662 0.166114560913997 0.00802266965063258 0.0235379827287328 0.015980976072942 0.0306277871742772 "prevalence" 1527 417 +"Blautia_faecis" "reads" "reads" "reads" -0.558174563011915 0.0751095110122617 0.00829978178009438 0.0243145031458837 1.72780622036332e-13 3.57757523275228e-12 "abundance" 1527 1125 +"Odoribacter_splanchnicus" "reads" "reads" "reads" -0.135054932923525 0.07130973611934 0.00832563639937778 0.0243537328209344 0.0165819565773009 0.0316074840173823 "abundance" 1527 757 +"GGB33469_SGB15236" "diagnosis" "CD" "diagnosisCD" 0.936229582054257 0.341165456480258 0.00834911518424009 0.0243859059342379 1.27654548573381e-05 6.1836331786005e-05 "abundance" 1527 293 +"GGB3277_SGB4327" "diagnosis" "UC" "diagnosisUC" 1.54624824068937 0.510053382852433 0.00836404579385697 0.0243930529570097 0.00836404579385697 0.0178432976935615 "abundance" 1527 152 +"Clostridium_leptum" "diagnosis" "UC" "diagnosisUC" -0.383243883006397 0.145502474076442 0.0084401944652108 0.0245784500521936 0.016809152047811 0.0319252959756986 "prevalence" 1527 652 +"Bacteroides_fragilis" "antibiotics" "Yes" "antibioticsYes" -1.23573678073388 0.407228414286501 0.00876642029993047 0.0254904542649764 0.00876642029993047 0.018551783239933 "abundance" 1527 787 +"Alistipes_SGB2313" "diagnosis" "UC" "diagnosisUC" -2.19886839943337 0.816680157395976 0.00888937934731837 0.025809579858336 0.00888937934731837 0.0187743691815364 "abundance" 1527 73 +"Coprococcus_eutactus" "reads" "reads" "reads" 0.246493845711127 0.220026846928141 0.00892090048427319 0.0258243548833627 0.0177622185030961 0.033554387726779 "abundance" 1527 177 +"GGB1549_SGB2133" "diagnosis" "UC" "diagnosisUC" -1.14735985803583 0.438732533918902 0.00891832348450965 0.0258243548833627 0.0177571104752449 0.033554387726779 "prevalence" 1527 46 +"GGB1543_SGB2126" "diagnosis" "CD" "diagnosisCD" -5.68366523570735 2.02560606021592 0.00905833860173111 0.0261447468652623 0.00905833860173111 0.0190930250767027 "abundance" 1527 42 +"Clostridium_symbiosum" "age" "age" "age" -0.478426647001407 0.146005555000121 0.00925199434061286 0.026656871063923 0.00925199434061286 0.0194468972426834 "abundance" 1527 539 +"Parabacteroides_distasonis" "diagnosis" "CD" "diagnosisCD" 0.506206250440433 0.14794574719493 0.00926305806161909 0.026656871063923 0.00926305806161909 0.0194468972426834 "abundance" 1527 1140 +"Lacrimispora_celerecrescens" "antibiotics" "Yes" "antibioticsYes" 0.808904511496462 0.289928190201303 0.00936265305073425 0.0269038589134334 0.00936265305073425 0.0195781418249017 "abundance" 1527 756 +"GGB9480_SGB14874" "reads" "reads" "reads" 0.169695355536771 0.0653844397221476 0.00944952702277143 0.027113620855353 0.0188097604845888 0.0352182749498683 "prevalence" 1527 332 +"Bacteroides_salyersiae" "antibiotics" "Yes" "antibioticsYes" 1.51026037448309 0.576591329441217 0.00962891628652185 0.0275878334660758 0.00962891628652185 0.0200160149578092 "abundance" 1527 150 +"Bacteroides_intestinalis" "diagnosis" "CD" "diagnosisCD" 0.575472579034106 0.222643777180029 0.00974571480986375 0.0278408285650201 0.0193964506625723 0.0361246065250024 "prevalence" 1527 158 +"GGB16040_SGB9347" "diagnosis" "CD" "diagnosisCD" 0.753920612259037 0.291818856560675 0.00977970583561952 0.0278971462814606 0.0194637690250078 0.0361861621310004 "prevalence" 1527 114 +"Bacteroides_uniformis" "diagnosis" "UC" "diagnosisUC" 0.514911791845527 0.199361917170586 0.00980023557670936 0.0279149567301605 0.0195044265360597 0.0361980218314219 "prevalence" 1527 1244 +"Faecalibacterium_SGB15315" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.11567441398719 0.432433085251377 0.00988022642509031 0.0281018376049876 0.0196628339759696 0.0364218448180468 "prevalence" 1527 619 +"Bifidobacterium_longum" "antibiotics" "Yes" "antibioticsYes" -0.480849283267352 0.186569447156664 0.00995695463282648 0.0281969410906419 0.0198147683200928 0.0365415454119997 "prevalence" 1527 843 +"Eubacterium_rectale" "age" "age" "age" 0.199111882311572 0.0772532467644868 0.00995490513716927 0.0281969410906419 0.00931472982149235 0.0195165767688411 "prevalence" 1527 1211 +"GGB1680_SGB2312" "diagnosis" "UC" "diagnosisUC" -2.92657281370659 1.13507598237134 0.00992861344566472 0.0281969410906419 0.00992861344566472 0.0205178391362465 "prevalence" 1527 12 +"Haemophilus_parainfluenzae" "reads" "reads" "reads" -0.630293503374665 0.106966140487165 0.0099810832971613 0.0282243657925516 0.0198625445705377 0.0365415454119997 "abundance" 1527 674 +"Klebsiella_pneumoniae" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 4.26812268613407 1.45672048325317 0.0100124884457238 0.0282314609277695 0.0100124884457238 0.0205704042775959 "abundance" 1527 119 +"Blautia_faecis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.908018015290119 0.352545959352745 0.0100065805737081 0.0282314609277695 0.0199130294926381 0.0365707115551753 "prevalence" 1527 1125 +"Lacrimispora_celerecrescens" "age" "age" "age" -0.359736527243803 0.0867194349099075 0.0100799572051815 0.0283807440618511 0.0100799572051815 0.0206287496292087 "abundance" 1527 756 +"Coprococcus_comes" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.43310566808888 1.07425764015354 0.0101179868474477 0.0284468292085076 0.0101179868474477 0.0206665263267017 "abundance" 1527 759 +"Hungatella_hathewayi" "reads" "reads" "reads" -0.750647428355976 0.155799498264643 0.0105138171139147 0.0295172394261342 0.0209170938775247 0.0382815444274975 "abundance" 1527 451 +"Sutterella_wadsworthensis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.359725223831 0.532898567428538 0.0107240381485718 0.0300211612354001 0.0213330713029316 0.0389079849670047 "prevalence" 1527 536 +"Barnesiella_intestinihominis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.96261345759487 1.04220726759776 0.0110369005313418 0.0308527949044947 0.0110369005313418 0.022242303360872 "abundance" 1527 431 +"GGB781_SGB1024" "diagnosis" "CD" "diagnosisCD" 1.98618635940123 0.781991279685848 0.0110881448490098 0.0309517643356645 0.0110881448490098 0.0223030113534369 "prevalence" 1527 18 +"Roseburia_inulinivorans" "age" "age" "age" -0.146133964033573 0.0575735679357761 0.011142022890789 0.0310577927654803 0.0221599011074791 0.040207655617694 "prevalence" 1527 951 +"Alistipes_finegoldii" "reads" "reads" "reads" 0.143788475554511 0.0566705327076069 0.0111720566521169 0.031097149142787 0.00165718322166195 0.00426825727335371 "prevalence" 1527 639 +"Alistipes_finegoldii" "diagnosis" "UC" "diagnosisUC" -0.820754227831113 0.281742024193184 0.0112536455461383 0.0312796918878438 2.47743100182888e-10 2.94679029298832e-09 "abundance" 1527 639 +"Roseburia_intestinalis" "reads" "reads" "reads" 0.138116797081409 0.0545985163834729 0.0114166465232082 0.0316876808328819 0.0227029532285806 0.0411223303762969 "prevalence" 1527 842 +"GGB51647_SGB4348" "age" "age" "age" -0.914358435046687 0.337084239313036 0.0117699386649155 0.0326219292925459 0.0117699386649155 0.023539877329831 "abundance" 1527 123 +"Phocaeicola_dorei" "diagnosis" "UC" "diagnosisUC" 0.382542202668167 0.151924985192573 0.0118034151112409 0.0326683755345108 0.0234675096141935 0.0422895736392292 "prevalence" 1527 769 +"Alistipes_dispar" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 2.47408646008733 1.01144658451464 0.0118912970621758 0.0328186362422198 0.0118912970621758 0.0237376364795041 "abundance" 1527 83 +"GGB3175_SGB4191" "reads" "reads" "reads" 0.402546139493873 0.290485008964188 0.0118769279738562 0.0328186362422198 0.0236127945296162 0.0424788944178445 "abundance" 1527 154 +"Bacteroides_ovatus" "antibiotics" "Yes" "antibioticsYes" 0.712189035370901 0.260435805726727 0.0123693681767513 0.0340528930164865 0.0123693681767513 0.0245145831306166 "abundance" 1527 1176 +"GGB3267_SGB4317" "diagnosis" "CD" "diagnosisCD" -2.70846062840228 1.00022136004136 0.012373364402101 0.0340528930164865 0.012373364402101 0.0245145831306166 "abundance" 1527 54 +"Alistipes_communis" "diagnosis" "CD" "diagnosisCD" -0.830763683269364 0.257142074707495 0.0125415518491381 0.0344334339181906 0.0249258131754915 0.0447647257029236 "abundance" 1527 407 +"Eisenbergiella_massiliensis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 2.6450618075517 0.862552146205412 0.0125468807317051 0.0344334339181906 0.0125468807317051 0.0248118090874168 "abundance" 1527 417 +"Bacteroides_cellulosilyticus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 4.22236896667693 1.50646454297415 0.0126320290284767 0.0346184918957132 0.0251044898995771 0.044932781921955 "abundance" 1527 433 +"Roseburia_inulinivorans" "reads" "reads" "reads" -0.114427040955117 0.0856374301452417 0.012914103489951 0.0352432377365423 2.93466108721885e-07 1.90122828717982e-06 "abundance" 1527 951 +"GGB3175_SGB4191" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.70525650732008 0.687914352670567 0.0131795973193984 0.035917619472949 0.0261854928532953 0.0465519872947472 "prevalence" 1527 154 +"Phocaeicola_dorei" "age" "age" "age" 0.523500719389242 0.189155135761806 0.0133121161777281 0.0362282381772712 0.0133121161777281 0.0262268557531359 "abundance" 1527 769 +"Veillonella_dispar" "antibiotics" "Yes" "antibioticsYes" -0.519474272703745 0.210029714640751 0.0133857836185003 0.0363780545070231 0.0265923880339193 0.0471959021240652 "prevalence" 1527 526 +"GGB16040_SGB9347" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.75271819729492 0.710188514711023 0.0135884781277122 0.0368264719300272 0.0269923095175971 0.0477451907044933 "prevalence" 1527 114 +"Phocaeicola_vulgatus" "diagnosis" "UC" "diagnosisUC" 0.601690869276425 0.243795838692054 0.0135866054707212 0.0368264719300272 0.0269886150932254 0.0477451907044933 "prevalence" 1527 1288 +"Oscillibacter_sp_ER4" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.77498969757506 0.720026477151701 0.013694718317631 0.0370629911255554 0.0272018913254628 0.0480354468891116 "prevalence" 1527 458 +"Eubacterium_ventriosum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.04904154380937 0.426205187033296 0.0138413989830234 0.037408151608337 0.0274912136402395 0.0484653115260316 "prevalence" 1527 520 +"Ruthenibacterium_lactatiformans" "antibiotics" "Yes" "antibioticsYes" 0.464752091076219 0.188895128943638 0.0138793470453846 0.0374589007274608 0.027566057816363 0.048516261756799 "prevalence" 1527 797 +"Acidaminococcus_intestini" "antibiotics" "Yes" "antibioticsYes" -1.35321478043229 0.487650105418452 0.0139945141017379 0.0376967845978479 0.000410004234004784 0.00128095997369542 "abundance" 1527 173 +"Coprococcus_comes" "antibiotics" "Yes" "antibioticsYes" 0.481897920793246 0.196124060088894 0.014006072475966 0.0376967845978479 0.02781597488573 0.0488746580354923 "prevalence" 1527 759 +"Alistipes_finegoldii" "diagnosis" "CD" "diagnosisCD" -0.326402102543824 0.133124118686164 0.0142118755051899 0.0380932849617847 0.0282217736050048 0.0494232055172223 "prevalence" 1527 639 +"Barnesiella_intestinihominis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.76525481266426 0.719857985189764 0.0141975271133006 0.0380932849617847 0.0281934844504683 0.0494232055172223 "prevalence" 1527 431 +"Bacteroides_eggerthii" "antibiotics" "Yes" "antibioticsYes" 0.53403480510047 0.21905580163769 0.0147731088667425 0.0394892677504991 0.0293279729878964 0.0511597332561387 "prevalence" 1527 409 +"Bacteroides_intestinalis" "age" "age" "age" 0.591560829880379 0.221394975605996 0.0148671720118041 0.039567973743444 5.77787605732681e-17 2.00617059907415e-15 "abundance" 1527 158 +"Ruminococcus_gnavus" "reads" "reads" "reads" -0.599245244801297 0.100583589292857 0.0148835520478154 0.039567973743444 0.00978246819749185 0.0202554635618655 "abundance" 1527 767 +"Faecalibacterium_SGB15346" "antibiotics" "Yes" "antibioticsYes" -0.471462461306196 0.193541194844336 0.0148515095764766 0.039567973743444 0.0294824518162531 0.0512907234233332 "prevalence" 1527 743 +"Rikenellaceae_bacterium" "diagnosis" "UC" "diagnosisUC" -0.746746920562681 0.306566198841513 0.0148571594053397 0.039567973743444 0.0148571594053397 0.0288934812744727 "prevalence" 1527 67 +"Lacrimispora_amygdalina" "age" "age" "age" -0.330900471260489 0.0802016101563664 0.0150192797812545 0.0398745552888197 3.53695396641067e-17 1.33393692447488e-15 "abundance" 1527 865 +"Bacteroides_cellulosilyticus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.77783278970011 1.01736669301743 0.0150734828969404 0.0399641595395137 0.0150734828969404 0.029260290329355 "abundance" 1527 433 +"Ruminococcus_torques" "reads" "reads" "reads" -0.544235279369927 0.0767417904838363 0.0151845890292943 0.0402041828770205 2.5360188692482e-09 2.41264497831181e-08 "abundance" 1527 1093 +"Phocaeicola_massiliensis" "age" "age" "age" 0.140604717648096 0.0582287261421185 0.0157483136376894 0.0416403313234709 0.0312486178929477 0.0542739152877512 "prevalence" 1527 396 +"GGB1680_SGB2312" "diagnosis" "CD" "diagnosisCD" -1.87442486379551 0.777118113913164 0.0158643871462543 0.0418905574105146 0.0158643871462543 0.0304596233208082 "prevalence" 1527 12 +"Oscillibacter_sp_ER4" "diagnosis" "CD" "diagnosisCD" -0.336231969539385 0.139831724529117 0.016192518871776 0.0426993007765862 0.0321228400761392 0.0557006882108424 "prevalence" 1527 458 +"Ruminococcus_sp_BSD2780120874_150323_B10" "antibiotics" "Yes" "antibioticsYes" -2.10524100742246 0.876160467832143 0.0162699492625055 0.0428456615349538 0.0162699492625055 0.0311251203282714 "prevalence" 1527 90 +"Ruminococcus_bromii" "reads" "reads" "reads" 0.14743923254704 0.0613816249070919 0.0163052948582408 0.0428809504078096 0.0323447270760674 0.05599349474152 "prevalence" 1527 429 +"Lachnospira_eligens" "reads" "reads" "reads" -0.569829734684572 0.0895781689855599 0.0164831021344055 0.0432321900276891 2.47490019722865e-08 2.01038046790266e-07 "abundance" 1527 929 +"Collinsella_SGB14861" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.27841947035937 0.53303438834557 0.0164677330319039 0.0432321900276891 0.0326642798325978 0.056454139939809 "prevalence" 1527 593 +"Bacteroides_eggerthii" "age" "age" "age" 0.578596351933614 0.221852350898721 0.0165427155959326 0.0433303837459145 0.0165427155959326 0.031589706454439 "abundance" 1527 409 +"Bifidobacterium_adolescentis" "antibiotics" "Yes" "antibioticsYes" -1.91629219942669 0.747415696274558 0.0166167887393276 0.0434661381481206 0.0166167887393276 0.0316168088445584 "abundance" 1527 427 +"Faecalibacterium_SGB15346" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.8660161644104 0.362154467099718 0.0167893097230136 0.0438587048111879 0.0332967385250518 0.0570801231858032 "prevalence" 1527 743 +"Bacteroides_eggerthii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.28981727459981 0.539601145919229 0.0168338800045188 0.0439164239370224 0.0333843804930311 0.0571376106979593 "prevalence" 1527 409 +"Enterocloster_clostridioformis" "reads" "reads" "reads" -0.725260201839397 0.156246997569666 0.016953178272339 0.0441686804588672 8.36153107032521e-05 0.000314226932749588 "abundance" 1527 312 +"Parasutterella_excrementihominis" "diagnosis" "UC" "diagnosisUC" 0.836350348290426 0.243224409472515 0.0175440511824156 0.0456472383627699 0.0175440511824156 0.0332612532291399 "abundance" 1527 699 +"Clostridium_sp_AF36_4" "reads" "reads" "reads" 0.137127382971277 0.0578011617156892 0.0176730234192363 0.0459216592568985 0.0350337110816956 0.0597667187435712 "prevalence" 1527 568 +"GGB3175_SGB4191" "diagnosis" "CD" "diagnosisCD" -1.37718265626506 0.520931041685149 0.017823434164388 0.0462509832101118 0.017823434164388 0.0336099044242746 "abundance" 1527 154 +"Bacteroides_cellulosilyticus" "reads" "reads" "reads" 0.143873768519257 0.0608646565837268 0.0180870561150239 0.0468728218153271 0.0358469706311397 0.0610554854620702 "prevalence" 1527 433 +"Oscillospiraceae_bacterium" "reads" "reads" "reads" 0.273811033878521 0.116091664958365 0.0183451947632502 0.0474788219435642 0.0363538433555989 0.061819095947685 "prevalence" 1527 81 +"Faecalibacterium_SGB15346" "age" "age" "age" 0.128696118594084 0.0546045419998311 0.0184294141709324 0.0476336974735475 0.036519185035181 0.0620004170372205 "prevalence" 1527 743 +"GGB3478_SGB14857" "antibiotics" "Yes" "antibioticsYes" 5.02206957315339 1.76885772381476 0.018629472191614 0.0480871712845625 0.018629472191614 0.03506724177245 "abundance" 1527 16 +"Roseburia_sp_AF02_12" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.83009359940038 1.07868120584323 0.0187762854908569 0.0484021924131059 0.0187762854908569 0.0352182749498683 "abundance" 1527 363 +"Phocaeicola_coprocola" "diagnosis" "CD" "diagnosisCD" 5.70068445844659 2.40848433597734 0.0188072059124614 0.0484180241804343 0.0188072059124614 0.0352182749498683 "abundance" 1527 101 +"Escherichia_coli" "age" "age" "age" 0.361056033232739 0.11934533132248 0.0191212056026225 0.0490970246353803 0.0378767907015473 0.064099184264157 "abundance" 1527 707 +"Veillonella_rogosae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.31139435386234 0.595731489606051 0.0191940951272788 0.0492195037778251 0.0191940951272788 0.0358742733706308 "abundance" 1527 207 +"Bifidobacterium_longum" "diagnosis" "CD" "diagnosisCD" 0.606752763521186 0.236646335221987 0.0193039131273834 0.0494362336184892 0.0382351851927373 0.064498970548771 "abundance" 1527 843 +"Rikenellaceae_bacterium" "age" "age" "age" 0.260238621724932 0.111265048883483 0.0193402378230692 0.0494644302438184 0.0193402378230692 0.0360835532529348 "prevalence" 1527 67 +"Enterocloster_bolteae" "diagnosis" "CD" "diagnosisCD" 0.634808197178705 0.253156781584985 0.0195567232809344 0.0499527284848965 1.94694876937214e-10 2.41879752994939e-09 "abundance" 1527 866 +"Clostridiaceae_bacterium_Marseille_Q4149" "reads" "reads" "reads" 0.187180285189931 0.0802413646784996 0.0196630755493625 0.0500934154151948 0.0389395145586652 0.0654779098311312 "prevalence" 1527 181 +"Clostridium_sp_AF36_4" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.06083170211004 0.454697700041632 0.0196456097598639 0.0500934154151948 0.0389052695368909 0.0654779098311312 "prevalence" 1527 568 +"Clostridium_symbiosum" "antibiotics" "Yes" "antibioticsYes" 0.89227390827626 0.37474692855016 0.0196940088930916 0.0501068924181002 0.0196940088930916 0.0364218448180468 "abundance" 1527 539 +"Bacteroides_intestinalis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.77097223389645 1.48552189030424 0.0198424460357782 0.0504189070922115 0.0198424460357782 0.0365415454119997 "abundance" 1527 158 +"Bacteroides_caccae" "diagnosis" "UC" "diagnosisUC" -0.358239803357833 0.153858695806825 0.0198925232238624 0.0504805069862689 0.0393893339675128 0.06612899311557 "prevalence" 1527 958 +"Clostridium_sp_AM22_11AC" "diagnosis" "CD" "diagnosisCD" -0.311728126723 0.134276312457329 0.0202575989230724 0.0512737672223879 0.000415991231194585 0.00129323757979312 "prevalence" 1527 730 +"Clostridium_sp_AT4" "diagnosis" "UC" "diagnosisUC" 0.939392239884372 0.310385795652609 0.0207539576507633 0.0523943582036065 2.99306319173336e-18 1.43667033203201e-16 "abundance" 1527 528 +"Alistipes_dispar" "diagnosis" "CD" "diagnosisCD" -1.48119538969573 0.575657083474346 0.0208749649528575 0.0526318471198496 0.0208749649528575 0.0382707690802387 "abundance" 1527 83 +"Blautia_faecis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.03105318886657 0.473618568840398 0.020984558962212 0.0528399848094873 5.31261156921132e-22 5.10010710644287e-20 "abundance" 1527 1125 +"Clostridium_sp_AF34_10BH" "age" "age" "age" 0.298642102357478 0.0851267324431158 0.0212142309035439 0.0533495587973292 0.0212142309035439 0.0387581796438449 "abundance" 1527 960 +"Clostridium_sp_AF36_4" "reads" "reads" "reads" -0.0934090361304446 0.102951667112001 0.0213709584714894 0.053671423944631 0.0350337110816956 0.0597667187435712 "abundance" 1527 568 +"Waltera_intestinalis" "age" "age" "age" 0.389394210608324 0.139130767727834 0.021397154172399 0.053671423944631 0.021397154172399 0.038957577251816 "abundance" 1527 524 +"Alistipes_finegoldii" "age" "age" "age" -0.348704173693503 0.104010595100668 0.0214824898557557 0.0538163912540342 0.0214824898557557 0.0390456270011671 "abundance" 1527 639 +"Bacteroides_intestinalis" "diagnosis" "CD" "diagnosisCD" -1.60523578712083 0.642050034623711 0.0215963603234045 0.0540323790933834 0.0193964506625723 0.0361246065250024 "abundance" 1527 158 +"Dysgonomonas_mossii" "reads" "reads" "reads" -0.466819131246578 0.203497919946925 0.0217919375169723 0.0544519768646596 0.0431089864932009 0.0718029806574451 "prevalence" 1527 31 +"Tyzzerella_nexilis" "reads" "reads" "reads" -0.78527601350401 0.189616347759862 0.0222720041281255 0.0555804547463054 0.0440479660883677 0.0732514207705768 "abundance" 1527 188 +"GGB4237_SGB5728" "reads" "reads" "reads" 0.576060206418237 0.253060572759645 0.0228237057948682 0.0568845932693526 0.0228237057948682 0.0412702625331863 "prevalence" 1527 6 +"GGB9480_SGB14874" "antibiotics" "Yes" "antibioticsYes" -0.573884040358794 0.252408132045593 0.0229879228924637 0.0572208934164001 0.0454474011860175 0.0754598359315008 "prevalence" 1527 332 +"Flavonifractor_plautii" "antibiotics" "Yes" "antibioticsYes" 0.606298800808034 0.242384578747812 0.0231023958960771 0.0572869055595617 0.0456710710960151 0.0755934969865078 "abundance" 1527 1224 +"Gemmiger_formicilis" "age" "age" "age" -0.393859391553182 0.13220326230238 0.0230780722727548 0.0572869055595617 0.0230780722727548 0.0416588791795369 "abundance" 1527 472 +"Parasutterella_SGB9260" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.10563109112761 0.486504582579627 0.0230501993430561 0.0572869055595617 0.0455690869963576 0.0755431018338361 "prevalence" 1527 269 +"Ruminococcus_bicirculans" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.540714281982883 0.2383380625902 0.0232874132413303 0.0576725037687697 0.046032522867188 0.075835170277302 "prevalence" 1527 678 +"Dysgonomonas_mossii" "age" "age" "age" -0.500463227423123 0.221925269129328 0.0241271790486146 0.059676592229105 0.0476722373283853 0.078292196918779 "prevalence" 1527 31 +"Prevotella_stercorea" "diagnosis" "CD" "diagnosisCD" 1.73126612311649 0.772442951949029 0.0250075092074925 0.0617758192053607 0.0250075092074925 0.0448351947760816 "prevalence" 1527 40 +"Prevotella_copri_clade_A" "antibiotics" "Yes" "antibioticsYes" -2.66666520197953 1.14037927650797 0.0252085520541768 0.0621153981259288 0.0252085520541768 0.0450426919952804 "abundance" 1527 289 +"Alistipes_putredinis" "age" "age" "age" -0.304053815963452 0.0798045119103706 0.0253099776264989 0.0622867711362454 1.90284320916668e-05 8.73653229947832e-05 "abundance" 1527 873 +"Alistipes_communis" "age" "age" "age" 0.320511320272252 0.105329219995559 0.0253919991594986 0.0624100205756734 2.55807904506392e-12 4.4284122485041e-11 "abundance" 1527 407 +"Tyzzerella_nexilis" "age" "age" "age" -0.19509436621329 0.0873877497748649 0.0255810174700626 0.0627956132368119 0.0505076464853215 0.0824545233645662 "prevalence" 1527 188 +"Dysgonomonas_mossii" "diagnosis" "UC" "diagnosisUC" -8.99520083254449 3.8146381099932 0.0256382901145954 0.0628572382483305 0.0256382901145954 0.0457331661503594 "abundance" 1527 31 +"Ruminococcus_gnavus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.71509311182354 0.538252076562866 0.0257866363646432 0.062983859320641 0.0257866363646432 0.0459202158533949 "abundance" 1527 767 +"Dysosmobacter_sp_BX15" "age" "age" "age" 0.122214884512267 0.0548056577029754 0.0257495411783078 0.062983859320641 0.0508360434857222 0.0828294383899496 "prevalence" 1527 621 +"Tyzzerella_nexilis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.612196983175096 0.274597849248185 0.0257852353530168 0.062983859320641 0.0509055923438232 0.0828294383899496 "prevalence" 1527 188 +"Dialister_invisus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.48975453641142 0.219956386380171 0.0259741264731035 0.0633626006597305 0.0512735977001661 0.0831719188500391 "prevalence" 1527 726 +"Bacteroides_cellulosilyticus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.19287698041667 0.536473520710553 0.0261785746677013 0.0637817143400103 0.0251044898995771 0.044932781921955 "prevalence" 1527 433 +"Bacteroides_uniformis" "diagnosis" "CD" "diagnosisCD" 0.457104387853418 0.17078733239939 0.0262286073972575 0.0638240334423925 2.32599096720072e-05 0.000103936950155055 "abundance" 1527 1244 +"Ruminococcus_gnavus" "diagnosis" "CD" "diagnosisCD" 0.298822181921908 0.135024213289831 0.0268907033698482 0.0653537741103027 0.0530582968119712 0.0854109168192708 "prevalence" 1527 767 +"Hungatella_hathewayi" "diagnosis" "UC" "diagnosisUC" -0.95386443368978 0.414029311606182 0.0273983061265605 0.0665047082873281 0.0540459450745162 0.0867363495420808 "abundance" 1527 451 +"Blautia_wexlerae" "antibiotics" "Yes" "antibioticsYes" -0.498614703863421 0.226264043455684 0.0275464969292496 0.0667814578160717 0.0543341843654261 0.08706661409695 "prevalence" 1527 1302 +"GGB9453_SGB14844" "antibiotics" "Yes" "antibioticsYes" 0.508664314800966 0.23111995458581 0.0277454303892648 0.0671803853539323 0.054721051871044 0.0875536829936704 "prevalence" 1527 222 +"Clostridium_fessum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.65665776443209 0.602545401022002 0.02782539398246 0.0672589415542006 1.34278351725912e-17 5.45376690086783e-16 "abundance" 1527 926 +"Lachnospira_sp_NSJ_43" "reads" "reads" "reads" -0.735846599142626 0.175578597522385 0.0278467163343645 0.0672589415542006 0.0549179930581225 0.0877358557781806 "abundance" 1527 296 +"Fusicatenibacter_saccharivorans" "diagnosis" "UC" "diagnosisUC" 0.675944650358929 0.177942618494985 0.0278995745438568 0.0673034180971559 4.00782998099176e-07 2.53429249097443e-06 "abundance" 1527 1119 +"Prevotella_sp_885" "age" "age" "age" 1.28038342826663 0.566066638074464 0.0284346403610106 0.068425230622432 0.0284346403610106 0.0497135434126278 "abundance" 1527 69 +"Bilophila_wadsworthia" "antibiotics" "Yes" "antibioticsYes" -0.427082670504985 0.194895324997565 0.0284269195909558 0.068425230622432 0.0560457494244809 0.0894022830698668 "prevalence" 1527 764 +"Clostridium_sp_1001270H_150608_G6" "reads" "reads" "reads" 0.258079521026178 0.2694114033924 0.0285447678331485 0.0686057519630654 0.0562747318956487 0.0896321521595852 "abundance" 1527 141 +"Paraprevotella_clara" "reads" "reads" "reads" 0.189308560240036 0.239640860765475 0.0292072566061832 0.0699399257456886 0.0102480578716512 0.0208917936534047 "abundance" 1527 178 +"Roseburia_faecis" "antibiotics" "Yes" "antibioticsYes" -0.943175010155139 0.359206635741803 0.0293587105617614 0.0702165488833315 0.0293587105617614 0.0511597332561387 "abundance" 1527 922 +"Ruminococcus_bromii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.56970560770797 0.721120842057446 0.0294986235260491 0.0704649271025673 0.0581270782621667 0.0920272783281081 "prevalence" 1527 429 +"Odoribacter_splanchnicus" "diagnosis" "CD" "diagnosisCD" 0.418005912476702 0.152355160014926 0.0299880086442474 0.0715464821622216 0.0590767366260474 0.0933907692771049 "abundance" 1527 757 +"Dysosmobacter_sp_BX15" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.84870241107695 1.01648576281524 0.0311285342804747 0.0740866698953076 0.00311101909769311 0.00760471334991649 "abundance" 1527 621 +"Dorea_longicatena" "age" "age" "age" -0.276658738869766 0.0671571571693282 0.0318601520630497 0.0755518654504844 0.0627052348366188 0.097953739626434 "abundance" 1527 1020 +"Dysosmobacter_welbionis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.699745042226958 0.341654667372603 0.0318482061599248 0.0755518654504844 7.38295629262187e-23 7.7964018450087e-21 "abundance" 1527 1191 +"Clostridium_sp_AF36_4" "antibiotics" "Yes" "antibioticsYes" -1.04595339259144 0.420947395796421 0.0329143215245631 0.0776746186702853 0.0329143215245631 0.0567006909134398 "abundance" 1527 568 +"Bacteroides_caccae" "reads" "reads" "reads" 0.1232513567696 0.0577676975237037 0.0328780946742907 0.0776746186702853 0.0646752202391698 0.100881879723136 "prevalence" 1527 958 +"Prevotella_copri_clade_E" "diagnosis" "CD" "diagnosisCD" 1.65468229373899 0.775654668028519 0.032902429387931 0.0776746186702853 0.032902429387931 0.0567006909134398 "prevalence" 1527 38 +"GGB3277_SGB4327" "reads" "reads" "reads" 0.0949556802300911 0.20081703135202 0.0330026487275517 0.0776953923055855 0.0649161226320691 0.101108297196851 "abundance" 1527 152 +"Prevotella_copri_clade_C" "diagnosis" "CD" "diagnosisCD" 2.30061030830756 1.07902761890992 0.0329974443323584 0.0776953923055855 0.0329974443323584 0.0567513049103754 "prevalence" 1527 16 +"Bacteroides_ilei" "antibiotics" "Yes" "antibioticsYes" 1.13385536650601 0.53202671605779 0.0330726644962939 0.0777665299948955 0.0330726644962939 0.0567881848911973 "prevalence" 1527 17 +"Phocaeicola_massiliensis" "reads" "reads" "reads" 0.12962364965242 0.060849391901505 0.0331520198090285 0.0778594311380308 0.0652049832006387 0.101408633666973 "prevalence" 1527 396 +"Eubacterium_siraeum" "antibiotics" "Yes" "antibioticsYes" 0.413758089187267 0.194355361568197 0.0332646808038771 0.0780302356431883 0.0654228226187704 0.10159779512562 "prevalence" 1527 565 +"Eubacterium_siraeum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.14929255576693 1.35485111909016 0.0336441739451798 0.0787313962741094 0.0336441739451798 0.0574890739257442 "abundance" 1527 565 +"Bifidobacterium_longum" "diagnosis" "CD" "diagnosisCD" -0.297521344436929 0.140027225773475 0.0336083753656381 0.0787313962741094 0.0382351851927373 0.064498970548771 "prevalence" 1527 843 +"Collinsella_aerofaciens" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.21614486420543 1.21572303329583 0.0346370057219342 0.0807645694279945 4.87741289157536e-05 0.000196585802042121 "abundance" 1527 698 +"GGB9708_SGB15234" "diagnosis" "CD" "diagnosisCD" -0.332636496834401 0.157496933892321 0.0346848305471709 0.0807796887832801 0.0681666236242559 0.10523969963043 "prevalence" 1527 282 +"Collinsella_SGB14861" "antibiotics" "Yes" "antibioticsYes" -0.422794291972533 0.200487194825351 0.034958878711316 0.0813210107165614 0.0686956342218796 0.105901590858839 "prevalence" 1527 593 +"Bifidobacterium_longum" "antibiotics" "Yes" "antibioticsYes" 0.772633353215346 0.361410827593211 0.0350418208604639 0.0814170249243121 0.0198147683200928 0.0365415454119997 "abundance" 1527 843 +"Vescimonas_coprocola" "reads" "reads" "reads" -0.577775585109908 0.106963830462073 0.0351725884437832 0.0816237978849791 1.7525035035309e-05 8.15261541730673e-05 "abundance" 1527 599 +"Clostridium_sp_AM49_4BH" "reads" "reads" "reads" 0.147938269432226 0.0705089477877824 0.0358919962745858 0.0831944967028952 0.0704957571525968 0.108202790048172 "prevalence" 1527 344 +"Veillonella_parvula" "antibiotics" "Yes" "antibioticsYes" -0.419932243228553 0.200504949000083 0.0362267253170435 0.0838708782814018 0.0711410750068906 0.109034797107803 "prevalence" 1527 547 +"Phocaeicola_vulgatus" "age" "age" "age" -0.307760271783513 0.0973290512722447 0.0367134066155272 0.0847899336931888 0.0720789390057374 0.110224107547762 "abundance" 1527 1288 +"GGB9713_SGB15249" "reads" "reads" "reads" 0.142747900778047 0.0683498926485156 0.0367538760686443 0.0847899336931888 0.0143036227428516 0.0279715289193542 "prevalence" 1527 329 +"Lachnospira_pectinoschiza" "diagnosis" "CD" "diagnosisCD" -0.289056621098015 0.138392890578818 0.0367377370615893 0.0847899336931888 0.0721258127987721 0.110224107547762 "prevalence" 1527 500 +"Alistipes_shahii" "diagnosis" "UC" "diagnosisUC" -0.547300029114617 0.210070041854388 0.0371530790866719 0.0856098072350906 8.20394367665882e-13 1.51988851272837e-11 "abundance" 1527 673 +"Bacteroides_intestinalis" "reads" "reads" "reads" 0.179669209545087 0.0862595663805185 0.0372612287965187 0.0857578811170759 0.0731340584216108 0.111428205308455 "prevalence" 1527 158 +"Phocaeicola_coprocola" "diagnosis" "UC" "diagnosisUC" 5.2655094058735 2.4497780765296 0.0373696248959798 0.0858052256718503 0.0373696248959798 0.063342413948884 "abundance" 1527 101 +"GGB3304_SGB4367" "age" "age" "age" 0.166552990437954 0.0799901313798413 0.0373270145742531 0.0858052256718503 0.0732607231314797 0.111428205308455 "prevalence" 1527 155 +"Clostridiaceae_bacterium_Marseille_Q4149" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.21769801279549 0.585278557490963 0.037475629539144 0.0858468700111224 0.0735468362689329 0.111428205308455 "prevalence" 1527 181 +"Roseburia_hominis" "age" "age" "age" 0.119277643985467 0.0573180002170033 0.0374356857924207 0.0858468700111224 0.0734699410140926 0.111428205308455 "prevalence" 1527 876 +"Hungatella_hathewayi" "antibiotics" "Yes" "antibioticsYes" 1.00981325705994 0.489623420794378 0.0378365802401827 0.0865722222357341 0.0742415536760936 0.112319599830881 "abundance" 1527 451 +"Ruminococcus_bicirculans" "antibiotics" "Yes" "antibioticsYes" -1.06141589559453 0.44296250198614 0.0379715666667281 0.0867794634699259 0.0379715666667281 0.0641567590401037 "abundance" 1527 678 +"Bacteroides_caccae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.24512395983153 0.42417003442748 0.0382819839895587 0.0872847102865785 1.45641566956172e-15 4.27215263071437e-14 "abundance" 1527 958 +"Coprococcus_comes" "reads" "reads" "reads" -0.521958152842845 0.0811996601096278 0.0382755581211347 0.0872847102865785 4.02324725633063e-05 0.000169264904489448 "abundance" 1527 759 +"Ruminococcus_lactaris" "age" "age" "age" -0.376390520770058 0.143066732007265 0.0389860448401047 0.0886812156329233 0.0764521779879348 0.115333571364656 "abundance" 1527 379 +"Ruminococcus_lactaris" "diagnosis" "CD" "diagnosisCD" -0.820081726988527 0.325151096546438 0.0392167340596981 0.0890005788067944 3.48470494150439e-12 5.93523938423973e-11 "abundance" 1527 379 +"Dialister_invisus" "antibiotics" "Yes" "antibioticsYes" -0.98140848029027 0.406016426039596 0.0395172626775551 0.0894747755178941 8.73240193094162e-10 9.40960861130035e-09 "abundance" 1527 726 +"Bacteroides_stercoris" "diagnosis" "CD" "diagnosisCD" -0.27568959900369 0.133905618193554 0.0395100292528682 0.0894747755178941 0.0774590160941739 0.116685764615475 "prevalence" 1527 826 +"Oscillibacter_sp_ER4" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.72581439221983 1.50038940841791 0.0398028962618421 0.0900171982588419 0.0272018913254628 0.0480354468891116 "abundance" 1527 458 +"Parabacteroides_merdae" "diagnosis" "UC" "diagnosisUC" 0.300902696895466 0.146481211963373 0.0399556837091944 0.0902582727951049 0.0783149107577195 0.117472366136579 "prevalence" 1527 826 +"Bilophila_wadsworthia" "age" "age" "age" -0.277656992921985 0.0788585326769638 0.04024815229032 0.0906266109626469 0.00357489116640904 0.00852163673076286 "abundance" 1527 764 +"Dorea_longicatena" "diagnosis" "CD" "diagnosisCD" 0.409862196826844 0.165404911122255 0.0402578804071533 0.0906266109626469 0.0788950638794299 0.118174733981104 "abundance" 1527 1020 +"Alistipes_putredinis" "diagnosis" "CD" "diagnosisCD" -0.585429025944781 0.190560909006674 0.0403722594382422 0.0907795108657367 2.80422694031404e-05 0.000123902244726846 "abundance" 1527 873 +"Hungatella_hathewayi" "reads" "reads" "reads" 0.116684901082318 0.0569889743165712 0.0406090578821713 0.0912070104617962 0.0209170938775247 0.0382815444274975 "prevalence" 1527 451 +"Tyzzerella_nexilis" "antibiotics" "Yes" "antibioticsYes" 1.69612482700505 0.841037906195133 0.0406797853649681 0.0912609651012028 0.0141438968727477 0.0277619983227167 "abundance" 1527 188 +"Ruminococcus_bromii" "diagnosis" "CD" "diagnosisCD" -0.716268404372159 0.270518968001871 0.0408828552235425 0.0916113521866996 0.0408828552235425 0.068527452565176 "abundance" 1527 429 +"Blautia_wexlerae" "reads" "reads" "reads" -0.497170983438718 0.068658971448431 0.041183291573516 0.0920117374233019 1.68376401331828e-13 3.55610959612822e-12 "abundance" 1527 1302 +"Clostridiales_bacterium" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.03143159124338 0.557460575915583 0.041237508603442 0.0920117374233019 7.12332375623282e-19 3.95906836135887e-17 "abundance" 1527 985 +"GGB33469_SGB15236" "age" "age" "age" 0.36584490459761 0.151922713428887 0.0412498884251855 0.0920117374233019 2.91598233907796e-09 2.72502420359852e-08 "abundance" 1527 293 +"Parabacteroides_merdae" "diagnosis" "UC" "diagnosisUC" -0.515629502853411 0.199176697802067 0.0415930402770035 0.0926713805031526 0.0783149107577195 0.117472366136579 "abundance" 1527 826 +"Phocaeicola_massiliensis" "diagnosis" "CD" "diagnosisCD" -0.946207042400448 0.398353128409724 0.0417438373092027 0.0929014329182029 0.0417438373092027 0.0698597340705516 "abundance" 1527 396 +"Collinsella_SGB14861" "age" "age" "age" -0.297363474660678 0.0956095451709404 0.042208933935762 0.0937382028532516 0.0826362737675304 0.123603265012057 "abundance" 1527 593 +"Prevotella_SGB48271" "diagnosis" "UC" "diagnosisUC" 2.27499823024034 1.11992370237709 0.0422157720116998 0.0937382028532516 0.0422157720116998 0.0705377456398022 "prevalence" 1527 6 +"Alistipes_communis" "reads" "reads" "reads" 0.128662585435413 0.0634453507531852 0.0425676256234457 0.094305147923144 0.0833232484956737 0.124454526748842 "prevalence" 1527 407 +"Candidatus_Cibionibacter_quicibialis" "age" "age" "age" 0.260776449611769 0.0845989149031856 0.042684799917444 0.0944576433054197 0.042684799917444 0.0712087657390535 "abundance" 1527 933 +"Blautia_wexlerae" "antibiotics" "Yes" "antibioticsYes" 0.529571534544262 0.24260268076119 0.0436229515563422 0.0963155337187488 0.0543341843654261 0.08706661409695 "abundance" 1527 1302 +"Akkermansia_muciniphila" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.45295686730272 0.723757508214927 0.0446944416437594 0.0985699085461691 0.0873912901736714 0.129979158342813 "prevalence" 1527 407 +"Bifidobacterium_adolescentis" "reads" "reads" "reads" -0.629367636376329 0.14005662994087 0.0457869159006847 0.100751839718399 0.0019925172602298 0.0050337278153174 "abundance" 1527 427 +"Akkermansia_muciniphila" "diagnosis" "CD" "diagnosisCD" -0.867830927052943 0.364368743134121 0.0458679939553992 0.100816715623003 0.0458679939553992 0.0758006285084531 "abundance" 1527 407 +"Ruminococcus_sp_BSD2780120874_150323_B10" "reads" "reads" "reads" 0.219972158578016 0.11021001204447 0.0459408619026663 0.100863420402034 0.0459408619026663 0.0758024221393994 "prevalence" 1527 90 +"Clostridium_sp_AF34_10BH" "diagnosis" "CD" "diagnosisCD" -0.596409320811636 0.208032103592634 0.0460168807138811 0.10091693031978 3.85953718187472e-06 2.02769714629836e-05 "abundance" 1527 960 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"prevalence" 1527 121 +"Alistipes_SGB2313" "antibiotics" "Yes" "antibioticsYes" -3.62572904940043 1.78316201643902 0.0514866995715115 0.11093535573466 0.0514866995715115 0.0832728531412468 "abundance" 1527 73 +"Enterocloster_bolteae" "antibiotics" "Yes" "antibioticsYes" 0.618140822261166 0.309128656327479 0.0514935351337444 0.11093535573466 0.0514935351337444 0.0832728531412468 "abundance" 1527 866 +"GGB3278_SGB4328" "diagnosis" "UC" "diagnosisUC" -0.988772239727371 0.501131550955936 0.0519453969004346 0.11166260235803 0.0519453969004346 0.0838751362796009 "abundance" 1527 179 +"Roseburia_sp_AF02_12" "age" "age" "age" 0.326949404960402 0.13948604491422 0.0526047853624583 0.11295576988818 0.0526047853624583 0.0848101577751999 "abundance" 1527 363 +"GGB9342_SGB14306" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.71650911754269 1.92851444156505 0.0539627149345089 0.115367384966985 0.0539627149345089 0.0867345920408544 "prevalence" 1527 92 +"GGB3175_SGB4191" "reads" "reads" "reads" 0.170876584128854 0.0893264683747536 0.0557551467849762 0.118936197399392 0.0236127945296162 0.0424788944178445 "prevalence" 1527 154 +"Dysosmobacter_welbionis" "reads" "reads" "reads" -0.207402991593509 0.0627495787247088 0.0562969473291609 0.119830321439194 4.19501679754345e-19 2.6058457283564e-17 "abundance" 1527 1191 +"Bacteroides_mediterraneensis" "diagnosis" "CD" "diagnosisCD" -1.26922838383567 0.665355197906775 0.0564435556261275 0.119942694924795 0.0564435556261275 0.0897656547307088 "prevalence" 1527 13 +"Clostridium_sp_1001270H_150608_G6" "age" "age" "age" 0.594410003128653 0.297626459106204 0.0567443671415023 0.120389243642232 0.0567443671415023 0.0901083484231977 "abundance" 1527 141 +"Lachnospira_pectinoschiza" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.17948879287015 0.686399144851792 0.0568904601545845 0.120568285403534 0.000389339740142534 0.00122363918330511 "abundance" 1527 500 +"Odoribacter_splanchnicus" "reads" "reads" "reads" 0.107611682555651 0.0565535823427291 0.0570631248945957 0.120672452428615 0.0165819565773009 0.0316074840173823 "prevalence" 1527 757 +"Roseburia_intestinalis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.405470745795704 0.21357084911791 0.0576262494156243 0.121468922716429 0.00311036547735802 0.00760471334991649 "prevalence" 1527 842 +"Bacteroides_ilei" "diagnosis" "CD" "diagnosisCD" 2.06954876593167 1.09129650904865 0.0579054688102789 0.121925954800954 0.0579054688102789 0.0918140766721539 "prevalence" 1527 17 +"Parasutterella_excrementihominis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.05517515410692 0.627362867366674 0.0592048211033918 0.12426017232656 8.85002071347616e-06 4.4292046793511e-05 "abundance" 1527 699 +"Clostridiaceae_bacterium" "diagnosis" "CD" "diagnosisCD" 0.361736790832905 0.159707825983686 0.0594631903891336 0.124534913205109 0.000189778982566441 0.000650670797370655 "abundance" 1527 1109 +"Butyrivibrio_crossotus" "antibiotics" "Yes" "antibioticsYes" 1.04304459783207 0.554090705700584 0.0597757875379695 0.124921806255821 0.0597757875379695 0.0943546063379608 "prevalence" 1527 43 +"GGB781_SGB1024" "reads" "reads" "reads" 0.368156915720056 0.195877967826593 0.0601732762138578 0.125414042683444 0.0601732762138578 0.0948402681818415 "prevalence" 1527 18 +"Anaerostipes_hadrus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.692365294604837 0.53628853625609 0.0603927857529395 0.125539897192813 0.000174550089452618 0.000604343916268737 "abundance" 1527 1128 +"Clostridium_sp_1001270H_150608_G6" "antibiotics" "Yes" "antibioticsYes" -2.1668591067075 1.09437103375797 0.0607200178099112 0.125952138854105 0.0607200178099112 0.0954171708441462 "abundance" 1527 141 +"Lachnospira_eligens" "diagnosis" "UC" "diagnosisUC" 0.643836473904998 0.220408736384733 0.0606691145449938 0.125952138854105 0.0606691145449938 0.0954171708441462 "abundance" 1527 929 +"Oscillibacter_sp_ER4" "antibiotics" "Yes" "antibioticsYes" 0.371345400780177 0.198086488416148 0.0608391069777744 0.126047512250797 0.000208348177184312 0.000707445900664417 "prevalence" 1527 458 +"Ruminococcus_sp_BSD2780120874_150323_B10" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.60549739304934 1.92369423793978 0.060895011036209 0.126047512250797 0.060895011036209 0.095549972740322 "prevalence" 1527 90 +"Gemmiger_formicilis" "reads" "reads" "reads" -0.580157331564664 0.123395707067808 0.0610810088453362 0.126298720935224 0.000697702961115 0.00200755947394398 "abundance" 1527 472 +"Barnesiella_intestinihominis" "age" "age" "age" -0.307116705706731 0.119294536083815 0.0614208530411622 0.126733206802989 8.1060204996793e-05 0.000306808517837324 "abundance" 1527 431 +"Enterocloster_clostridioformis" "diagnosis" "CD" "diagnosisCD" 0.79251226215609 0.429174725104292 0.0613965599205109 0.126733206802989 0.000781564795685902 0.00221863554904385 "abundance" 1527 312 +"Parasutterella_SGB9260" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.65435272686178 1.27905051442886 0.0620401198527856 0.127677897446099 0.0620401198527856 0.0972023242797353 "abundance" 1527 269 +"Ruthenibacterium_lactatiformans" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.878674598715329 0.531089562117834 0.0620747198432929 0.127677897446099 5.49303871355893e-08 4.11393537696329e-07 "abundance" 1527 797 +"Roseburia_faecis" "diagnosis" "UC" "diagnosisUC" 0.684700155934643 0.25349843309907 0.0622575499516115 0.127692507570225 8.84707441975829e-05 0.000328961640396646 "abundance" 1527 922 +"Sutterella_wadsworthensis" "diagnosis" "UC" "diagnosisUC" -0.503617887051781 0.227694168316737 0.0621933026978202 0.127692507570225 0.000308111889372408 0.00100732555782434 "abundance" 1527 536 +"Ruthenibacterium_lactatiformans" "diagnosis" "UC" "diagnosisUC" -0.543975291773804 0.256379970328486 0.0625886449809885 0.128060955280473 0.0625886449809885 0.0979164579258131 "abundance" 1527 797 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0.160610766779298 7.31940996291392e-12 1.15362640609509e-10 "abundance" 1527 407 +"Clostridium_sp_AF34_10BH" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.80614497683748 0.786932155578375 0.0872749650345832 0.165729136712901 0.0011175646134256 0.0030494786350838 "abundance" 1527 960 +"Bacteroides_faecis" "antibiotics" "Yes" "antibioticsYes" -1.40762075623707 0.769694494621102 0.0909253127268008 0.172237949303484 0.00435176270004469 0.0100777662527351 "abundance" 1527 434 +"Clostridium_sp_1001270H_150608_G6" "diagnosis" "CD" "diagnosisCD" 0.873012278190751 0.531063584673722 0.0911139699010073 0.172349174430366 1.12035153400408e-10 1.44279417061989e-09 "abundance" 1527 141 +"Alistipes_putredinis" "reads" "reads" "reads" -0.193726641151932 0.0818596328014593 0.0912074584493049 0.172359162292013 0.00172858457505892 0.00444132679139227 "abundance" 1527 873 +"Veillonella_parvula" "diagnosis" "CD" "diagnosisCD" 0.572235639853203 0.342689739367321 0.0913422751806579 0.172447155268604 0.000964974803006334 0.00270295329436257 "abundance" 1527 547 +"Firmicutes_bacterium_AF16_15" "diagnosis" "UC" "diagnosisUC" -0.470165412763581 0.245650098478449 0.0924733644349521 0.174245857382735 1.35495273300473e-23 2.0440429800757e-21 "abundance" 1527 827 +"Prevotella_sp_885" "diagnosis" "CD" "diagnosisCD" 4.45525143704639 2.64738813342532 0.0930434412200145 0.174866398268933 0.000125494848308711 0.000446203905097639 "abundance" 1527 69 +"Blautia_wexlerae" "diagnosis" "CD" "diagnosisCD" -0.37761070125131 0.229185095398675 0.0994299978321128 0.184507327411157 0.0141981501362107 0.0278167839403311 "prevalence" 1527 1302 +"Clostridium_sp_AF36_4" "diagnosis" "CD" "diagnosisCD" 0.368565969193138 0.211261705169557 0.100240746446311 0.185659164508144 2.7167126133903e-08 2.18217966439092e-07 "abundance" 1527 568 +"Clostridium_leptum" "age" "age" "age" 0.0905921870612108 0.0552419620271482 0.101022597245891 0.186930071040219 0.0120482980743405 0.0239604571873889 "prevalence" 1527 652 +"GGB3746_SGB5089" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.866550214310869 0.614633636489033 0.102254796528457 0.188212584897142 0.00011601008727036 0.000415276786974577 "abundance" 1527 651 +"Bifidobacterium_adolescentis" "diagnosis" "UC" "diagnosisUC" -0.24165628758823 0.148879950540917 0.104554765361341 0.191830996728694 0.00701373085285419 0.0153026854971364 "prevalence" 1527 427 +"Eisenbergiella_massiliensis" "reads" "reads" "reads" -0.599586681000197 0.156007547375745 0.104859861417919 0.192210290066242 0.00685626398716313 0.0149900926924312 "abundance" 1527 417 +"Bifidobacterium_adolescentis" "diagnosis" "CD" "diagnosisCD" -0.684591916052168 0.346316618671099 0.107320790771002 0.196352832552938 2.24820638448719e-14 5.79050229760602e-13 "abundance" 1527 427 +"Clostridium_sp_AM49_4BH" "diagnosis" "CD" "diagnosisCD" -0.680169719834852 0.344455627865946 0.109579583394247 0.199923908452248 2.22201342060633e-28 5.86611543040072e-26 "abundance" 1527 344 +"GGB1266_SGB1699" "diagnosis" "UC" "diagnosisUC" -1.46689257776464 0.932093625210828 0.110729945769104 0.201646145417362 0.000523613426981026 0.00155756557434356 "abundance" 1527 84 +"Ruminococcus_gnavus" "diagnosis" "UC" "diagnosisUC" -0.495058884756246 0.288790829059667 0.111799357161966 0.20340404459449 0.00387153095321227 0.00908519263687146 "abundance" 1527 767 +"Enterocloster_bolteae" "age" "age" "age" -0.0852020079205708 0.0537759732335606 0.113105445757315 0.205016735630607 0.000366541459680289 0.00116938906774134 "prevalence" 1527 866 +"Barnesiella_intestinihominis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.43621341804771 1.78302137945495 0.114183188030342 0.206711728156339 0.0281934844504683 0.0494232055172223 "abundance" 1527 431 +"Phascolarctobacterium_succinatutens" "diagnosis" "CD" "diagnosisCD" -0.728317152224182 0.387457101516201 0.119289616123629 0.214633434535517 1.90584851419251e-06 1.07624386683812e-05 "abundance" 1527 125 +"Hungatella_hathewayi" "diagnosis" "UC" "diagnosisUC" 0.24508703939299 0.157484682821401 0.119646389302096 0.215077318027872 0.0540459450745162 0.0867363495420808 "prevalence" 1527 451 +"Candidatus_Cibionibacter_quicibialis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.887859058810972 0.805458498365363 0.121659072182331 0.217893516997503 0.000593113722515665 0.00173498086143086 "abundance" 1527 933 +"Firmicutes_bacterium_AF16_15" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.16087511639677 0.986486283690652 0.121502388549888 0.217893516997503 0.00707014648308301 0.0153307488421677 "abundance" 1527 827 +"Lachnospira_sp_NSJ_43" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -3.1088161775665 1.84965555194746 0.121459320067735 0.217893516997503 0.0116596885979017 0.0233636264883951 "abundance" 1527 296 +"Clostridium_sp_AF20_17LB" "reads" "reads" "reads" -0.17676648868894 0.102505160422047 0.122350249257903 0.218930757371742 6.35577818484257e-09 5.59308480266146e-08 "abundance" 1527 654 +"Alistipes_dispar" "diagnosis" "UC" "diagnosisUC" -1.11903534416274 0.738635139372199 0.123870407319395 0.221315818286167 0.0036370046332325 0.00863073459032252 "abundance" 1527 83 +"Bacteroides_faecis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.76730568435311 0.500314162610332 0.125116337080671 0.223063250598203 0.0104381269186518 0.0212382697998002 "prevalence" 1527 434 +"Bacteroides_ovatus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.58258683704402 0.744963046314089 0.130248588836955 0.231368856897645 9.0039462027077e-15 2.37704179751483e-13 "abundance" 1527 1176 +"Dorea_longicatena" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.463959700471898 0.375439374816682 0.131938543140576 0.233733375608962 3.60396617067098e-11 5.1429571300386e-10 "abundance" 1527 1020 +"Enterocloster_bolteae" "reads" "reads" "reads" -0.494087345917362 0.0967816992796847 0.133182119401108 0.235509376750919 5.96384546270019e-08 4.40407049553245e-07 "abundance" 1527 866 +"Bilophila_wadsworthia" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.18520155863276 0.596304444357551 0.133658324312149 0.235924449598861 4.72335849294945e-13 8.90690458670468e-12 "abundance" 1527 764 +"Prevotella_copri_clade_A" "age" "age" "age" -0.550572026485029 0.34837375898976 0.137849444009547 0.241557234507552 8.08112331479256e-07 4.90440587380514e-06 "abundance" 1527 289 +"Bacteroides_finegoldii" "age" "age" "age" 0.306807081006083 0.188428856309006 0.139664967751079 0.243233810965656 4.02090701505688e-05 0.000169264904489448 "abundance" 1527 333 +"Eubacterium_ventriosum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.11591812773915 1.2610495685808 0.139666497391743 0.243233810965656 5.25061863688878e-06 2.71796729438948e-05 "abundance" 1527 520 +"Odoribacter_splanchnicus" "diagnosis" "CD" "diagnosisCD" -0.199937604749092 0.136084315681673 0.141773512915748 0.246360876124837 0.0590767366260474 0.0933907692771049 "prevalence" 1527 757 +"Clostridium_sp_AM22_11AC" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.29764720428133 0.698146942537224 0.143003132992106 0.247939770955257 1.04458801944984e-09 1.07095626071751e-08 "abundance" 1527 730 +"Parasutterella_excrementihominis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.86833484176525 0.975715134518047 0.143589876905174 0.248736364780772 1.9473394617589e-05 8.86375203283362e-05 "abundance" 1527 699 +"GGB3278_SGB4328" "diagnosis" "CD" "diagnosisCD" -0.827062613003028 0.492913374278143 0.144260794820411 0.249677230362341 6.31877105946789e-06 3.22348900425029e-05 "abundance" 1527 179 +"Dialister_invisus" "age" "age" "age" 0.192488951566761 0.0943574221455816 0.146749585472944 0.252197616547171 4.47353626766817e-13 8.58918963392289e-12 "abundance" 1527 726 +"Phocaeicola_vulgatus" "reads" "reads" "reads" -0.192849083402186 0.0985466167216315 0.147400032705129 0.252870644342249 0.00183909067057018 0.00469101388435291 "abundance" 1527 1288 +"Faecalibacterium_SGB15315" "diagnosis" "UC" "diagnosisUC" 0.621291652441702 0.318284296961143 0.148699962314184 0.254876952949048 1.49640689854959e-05 7.05448966459094e-05 "abundance" 1527 619 +"Fusicatenibacter_saccharivorans" "reads" "reads" "reads" -0.451056122480753 0.0700736401081441 0.152371394298081 0.260712525795491 2.07043138005374e-07 1.39259588365398e-06 "abundance" 1527 1119 +"Faecalibacterium_SGB15315" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.42464869219889 1.52709064436575 0.152627876529246 0.260922896533812 3.73477687508988e-07 2.37585806029814e-06 "abundance" 1527 619 +"Blautia_obeum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.573290870512183 0.500006247207203 0.154892339462795 0.26433155572952 2.33418139101164e-10 2.83321327460723e-09 "abundance" 1527 899 +"Veillonella_parvula" "reads" "reads" "reads" 0.0796438663850514 0.0560914096197067 0.155638488909322 0.265141767505507 5.45584141108998e-05 0.000216592801883873 "prevalence" 1527 547 +"Roseburia_sp_AF02_12" "diagnosis" "CD" "diagnosisCD" 0.518682971784118 0.382241610512335 0.155929641326562 0.265406375568034 4.87130918614863e-19 2.85783472254053e-17 "abundance" 1527 363 +"Oscillibacter_sp_ER4" "diagnosis" "CD" "diagnosisCD" 0.338768215589729 0.240149023861549 0.157948526364428 0.268141981334573 0.0321228400761392 0.0557006882108424 "abundance" 1527 458 +"Clostridiaceae_bacterium" "diagnosis" "UC" "diagnosisUC" 0.455669914850083 0.174810256359809 0.159969757468113 0.2711022602712 4.15655323953897e-06 2.17293080245205e-05 "abundance" 1527 1109 +"Parabacteroides_distasonis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.576464447647923 0.666553764698118 0.162782696485784 0.274915634341591 1.08524148909607e-12 1.97588795256112e-11 "abundance" 1527 1140 +"Clostridium_leptum" "reads" "reads" "reads" -0.499771566218301 0.110688434879345 0.168172099774172 0.28230952144221 5.78323752675682e-09 5.1320158220632e-08 "abundance" 1527 652 +"Bacteroides_eggerthii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -4.7887512420518 3.30916199973186 0.168414752567988 0.282379717077865 0.000375160836618471 0.00118722407186406 "abundance" 1527 409 +"Dorea_longicatena" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.416588267930747 0.552848744464804 0.169284916385096 0.282720279159382 0.000794635924916801 0.00224969312791459 "abundance" 1527 1020 +"Phocaeicola_massiliensis" "age" "age" "age" -0.243621415870622 0.136520155407739 0.173505852041185 0.288782312511478 0.0312486178929477 0.0542739152877512 "abundance" 1527 396 +"Bacteroides_eggerthii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.81797698214068 2.3618064338227 0.173953569956923 0.289281085698577 0.0333843804930311 0.0571376106979593 "abundance" 1527 409 +"Roseburia_inulinivorans" "antibiotics" "Yes" "antibioticsYes" -0.660868498508471 0.397511748428766 0.174265160244463 0.289552825780341 4.40913357501693e-10 5.00650005937406e-09 "abundance" 1527 951 +"Eubacterium_siraeum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.20737154071798 1.9175502201583 0.17574009022268 0.29150775576835 0.0100055563591749 0.0205704042775959 "abundance" 1527 565 +"Fusicatenibacter_saccharivorans" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.31934041892984 0.643376302204644 0.177935467152366 0.29439957901416 2.30095523352743e-05 0.000103396116025743 "abundance" 1527 1119 +"Bacteroides_thetaiotaomicron" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.591977550893572 0.548546464291225 0.178424886518738 0.294655007716895 1.66167694580551e-17 6.49900316581712e-16 "abundance" 1527 1062 +"Haemophilus_parainfluenzae" "age" "age" "age" -0.220441576083683 0.117106287652162 0.179504021853672 0.295742713914059 6.58221613448968e-16 1.9859486394346e-14 "abundance" 1527 674 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0.206753679309205 0.329255655558424 5.23012508049999e-05 0.00020841555037766 "abundance" 1527 539 +"Bilophila_wadsworthia" "diagnosis" "UC" "diagnosisUC" 0.456676961828881 0.22590573344575 0.210669372939253 0.333588293941086 5.5897634788261e-08 4.15689453073265e-07 "abundance" 1527 764 +"GGB3746_SGB5089" "diagnosis" "UC" "diagnosisUC" 0.490430567037127 0.265594472578938 0.214203407166832 0.336999563288236 0.000189100209090789 0.000650455442344864 "abundance" 1527 651 +"Clostridiales_bacterium" "diagnosis" "CD" "diagnosisCD" 0.229908373107454 0.179332721673216 0.214739687555038 0.337300120162817 0.010546735524422 0.0214179859880569 "abundance" 1527 985 +"Lachnospira_eligens" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.491114899589603 0.514607745786861 0.215184547957086 0.337727394946303 5.0969022435474e-09 4.56129556710682e-08 "abundance" 1527 929 +"Collinsella_aerofaciens" "reads" "reads" "reads" -0.45921439006824 0.0918845588328283 0.223779380270616 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0.00272027205856354 0.00673855617146329 "prevalence" 1527 417 +"GGB16040_SGB9347" "age" "age" "age" -0.377715269248558 0.29676452708594 0.243921635531433 0.372944347283584 5.2914995298118e-24 9.31303917246876e-22 "abundance" 1527 114 +"Gemmiger_formicilis" "antibiotics" "Yes" "antibioticsYes" 0.385934831172204 0.356370266114228 0.244240814794729 0.373140384760673 1.93906231430634e-06 1.08341259466005e-05 "abundance" 1527 472 +"Phocaeicola_massiliensis" "diagnosis" "UC" "diagnosisUC" 0.176146269611292 0.151721537060031 0.245648425991752 0.374704937070947 0.000206761686979059 0.000704323682096407 "prevalence" 1527 396 +"GGB33469_SGB15236" "diagnosis" "UC" "diagnosisUC" 0.603025213464388 0.416924276113183 0.252660356870151 0.383603991704954 3.56569913978839e-10 4.13777834243576e-09 "abundance" 1527 293 +"Roseburia_sp_AF02_12" "diagnosis" "UC" "diagnosisUC" 0.598372391324287 0.412178713933475 0.253304769962291 0.383985663697686 2.39141160082146e-13 4.8564050970528e-12 "abundance" 1527 363 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4.67706263828194e-14 "abundance" 1527 960 +"GGB1549_SGB2133" "diagnosis" "UC" "diagnosisUC" -1.22667497063501 1.1275366320048 0.262528066633433 0.393316728252036 0.0177571104752449 0.033554387726779 "abundance" 1527 46 +"Bifidobacterium_adolescentis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -1.40866599230002 1.61119006227304 0.263394443313368 0.393622459737663 0.0039004944198316 0.00913286498302034 "abundance" 1527 427 +"Fusicatenibacter_saccharivorans" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.310703461581381 0.399988157585107 0.263489343570555 0.393622459737663 9.03328999910582e-22 7.94929519921312e-20 "abundance" 1527 1119 +"Clostridiales_bacterium" "reads" "reads" "reads" -0.246804818433393 0.0796140546498427 0.264267362420389 0.394280902932854 2.70051478028797e-14 6.78986573329547e-13 "abundance" 1527 985 +"Eubacterium_rectale" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.22999897595742 0.707962816536705 0.264535447157099 0.394280902932854 2.52664487222628e-11 3.81162426438708e-10 "abundance" 1527 1211 +"GGB9713_SGB15249" "diagnosis" "CD" "diagnosisCD" -0.495295038496536 0.347545687066164 0.264409527962423 0.394280902932854 3.12948462284242e-05 0.000135439990234491 "abundance" 1527 329 +"Flavonifractor_plautii" "antibiotics" "Yes" "antibioticsYes" -0.238991975231476 0.215875406725558 0.268258080176977 0.398613147274382 0.0456710710960151 0.0755934969865078 "prevalence" 1527 1224 +"Phocaeicola_plebeius" "diagnosis" "CD" "diagnosisCD" 0.299720971226049 0.271041241401472 0.268807398427339 0.39883529245113 2.50330975869953e-06 1.3487219924422e-05 "prevalence" 1527 127 +"Clostridium_fessum" "antibiotics" "Yes" "antibioticsYes" -0.435006903602648 0.282529571683648 0.272121281053909 0.402212544008577 0.00341552635464942 0.00821593583259632 "abundance" 1527 926 +"Faecalibacterium_SGB15315" "age" "age" "age" -0.198658536195502 0.137169819612974 0.272015505838983 0.402212544008577 1.32588040929311e-05 6.36422596460693e-05 "abundance" 1527 619 +"GGB9708_SGB15234" "diagnosis" "UC" "diagnosisUC" 0.652424075200694 0.487884814208459 0.272624558592321 0.402651842395613 7.70506466725872e-07 4.7039322969069e-06 "abundance" 1527 282 +"Eubacterium_ventriosum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.673767551472049 0.962040161443666 0.273334603936591 0.403395631489501 0.0274912136402395 0.0484653115260316 "abundance" 1527 520 +"Blautia_obeum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.18227773707126 0.680718299073315 0.276194568407798 0.407308820127424 0.000420241935828961 0.00129758913519118 "abundance" 1527 899 +"Phascolarctobacterium_faecium" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.901609764504935 0.588594392138528 0.279618556027212 0.412047253753524 3.04996841347947e-05 0.000133089530770013 "abundance" 1527 503 +"Tyzzerella_nexilis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.507369685053601 0.633300370289403 0.282994812012233 0.416081160776452 0.0509055923438232 0.0828294383899496 "abundance" 1527 188 +"Coprococcus_comes" "diagnosis" "CD" "diagnosisCD" -0.142680168689724 0.134244883194434 0.287856756306678 0.421977536368283 0.000996897679803714 0.00276305498654258 "prevalence" 1527 759 +"Clostridium_sp_AT4" "diagnosis" "CD" "diagnosisCD" 0.300492351612738 0.31057092934057 0.288691786375789 0.422549625901343 1.56508398364717e-07 1.06627657208478e-06 "abundance" 1527 528 +"Lacrimispora_amygdalina" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.327618440942044 0.655156509207217 0.288680646228431 0.422549625901343 4.81367217947703e-05 0.000195017943795125 "abundance" 1527 865 +"Phascolarctobacterium_faecium" "antibiotics" "Yes" "antibioticsYes" 0.328764274665612 0.345621070699285 0.295541798003589 0.42983042130821 0.000143490864931606 0.000505087844559253 "abundance" 1527 503 +"Proteus_mirabilis" "diagnosis" "UC" "diagnosisUC" -1.02292960525924 1.02436388153245 0.295683136141185 0.42983042130821 0.0154361139284379 0.0297455042124643 "abundance" 1527 100 +"GGB9453_SGB14844" "diagnosis" "UC" "diagnosisUC" 0.201709914265843 0.192961066489573 0.295865873418394 0.42983042130821 0.0132571978726099 0.0261674784177123 "prevalence" 1527 222 +"Faecalibacterium_SGB15315" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.834523901711968 1.17098325786561 0.297602176301346 0.432031688330483 0.0196628339759696 0.0364218448180468 "abundance" 1527 619 +"Roseburia_hominis" "diagnosis" "CD" "diagnosisCD" -0.339498761823195 0.205796453028776 0.299821793449736 0.43460814866527 2.72088384812913e-07 1.77361317507677e-06 "abundance" 1527 876 +"Bilophila_wadsworthia" "antibiotics" "Yes" "antibioticsYes" 0.289487102069002 0.315423944608307 0.309580023290619 0.446764671720731 0.0560457494244809 0.0894022830698668 "abundance" 1527 764 +"Lachnospira_eligens" "diagnosis" "CD" "diagnosisCD" 0.201337079402031 0.213667614121984 0.311052158413504 0.44814234323272 0.00136041001188853 0.00362776003170274 "abundance" 1527 929 +"Alistipes_communis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.06234131349911 0.805078755779418 0.311705263156782 0.448506689402321 2.33764937843341e-07 1.54284858976605e-06 "abundance" 1527 407 +"Bacteroides_ovatus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.278028707739532 0.429368354125472 0.313701998626956 0.451047612448177 2.18418713815684e-20 1.6475011556383e-18 "abundance" 1527 1176 +"GGB51647_SGB4348" "diagnosis" "CD" "diagnosisCD" 0.566325660350745 0.610099357434979 0.314157927484776 0.451371022283274 0.00279713543683338 0.00688525645989755 "abundance" 1527 123 +"GGB3278_SGB4328" "reads" "reads" "reads" -0.10132334617713 0.238323952190999 0.315428219830936 0.45286314588512 0.0106107809243939 0.0215066883995393 "abundance" 1527 179 +"Phocaeicola_vulgatus" "diagnosis" "UC" "diagnosisUC" 0.405066443243954 0.261283099273066 0.317747704943596 0.454523437379053 0.0269886150932254 0.0477451907044933 "abundance" 1527 1288 +"Veillonella_dispar" "age" "age" "age" -0.203162258161464 0.16334441110444 0.31730280719185 0.454523437379053 4.49063013095428e-16 1.39473688773168e-14 "abundance" 1527 526 +"Prevotella_sp_885" "diagnosis" "UC" "diagnosisUC" 2.9394466185705 2.84882336320947 0.318716734416907 0.454910517933262 9.67035698682687e-05 0.000355815225717393 "abundance" 1527 69 +"Ruminococcus_bicirculans" "diagnosis" "UC" "diagnosisUC" -0.238296752118999 0.244911366962762 0.330699474062553 0.469954016231439 5.61822257237387e-05 0.000221374740165179 "abundance" 1527 678 +"Veillonella_parvula" "age" "age" "age" 0.170005885423015 0.158704011112634 0.337393948170456 0.478423639132852 1.04036658002882e-13 2.33750448619241e-12 "abundance" 1527 547 +"GGB9453_SGB14844" "antibiotics" "Yes" "antibioticsYes" -0.698006233253002 0.631621731403353 0.337952310491094 0.478867885931543 0.054721051871044 0.0875536829936704 "abundance" 1527 222 +"GGB9713_SGB15249" "diagnosis" "UC" "diagnosisUC" -0.385217423987576 0.435667801195637 0.340226037538632 0.481043181874447 3.15215442126236e-14 7.74110481128617e-13 "abundance" 1527 329 +"Barnesiella_intestinihominis" "diagnosis" "CD" "diagnosisCD" -0.381154811257552 0.290032443943292 0.344751106551898 0.48673675014625 8.5278803173987e-05 0.00031934190124727 "abundance" 1527 431 +"Eubacterium_siraeum" "age" "age" "age" 0.141844992283544 0.126983783209072 0.349440826476787 0.490785346360714 1.26004114554975e-08 1.03953394507854e-07 "abundance" 1527 565 +"Clostridiaceae_bacterium_Marseille_Q4149" "diagnosis" "CD" "diagnosisCD" 0.47214846221581 0.563166380046689 0.35352841090971 0.495193200657759 0.000553103245020359 0.00163607010291737 "abundance" 1527 181 +"Alistipes_communis" "diagnosis" "CD" "diagnosisCD" 0.132539118649147 0.143192175159332 0.354652291107727 0.496386700138692 0.0249258131754915 0.0447647257029236 "prevalence" 1527 407 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1.37435359658915e-06 7.97427141757223e-06 "abundance" 1527 951 +"Bacteroides_eggerthii" "antibiotics" "Yes" "antibioticsYes" -0.802107304666547 0.792764293373341 0.367315504759292 0.507591581541482 0.0293279729878964 0.0511597332561387 "abundance" 1527 409 +"Coprococcus_comes" "diagnosis" "UC" "diagnosisUC" -0.130276746548901 0.144498075429518 0.367279387735626 0.507591581541482 7.66811789907549e-05 0.000291278147533227 "prevalence" 1527 759 +"Collinsella_SGB14861" "diagnosis" "UC" "diagnosisUC" 0.385578724069721 0.283867071554501 0.370983645710603 0.511214417290915 3.70051508116117e-08 2.87334112184279e-07 "abundance" 1527 593 +"Blautia_wexlerae" "age" "age" "age" -0.121587834758441 0.0687140378054221 0.371516234053758 0.511587541466556 2.26867619932168e-06 1.23490828169262e-05 "abundance" 1527 1302 +"Phocaeicola_dorei" "reads" "reads" "reads" -0.518811526102892 0.196832544986499 0.372177421796855 0.511776694012002 5.12516549090151e-25 1.0824349516784e-22 "abundance" 1527 769 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0.106273559079961 0.421873671470833 0.560776295274835 2.02222002747324e-29 7.11821449670581e-27 "abundance" 1527 843 +"Faecalibacterium_prausnitzii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.0662388477040517 0.359919047185784 0.426091330962764 0.565613084715517 1.43339720838758e-09 1.455449473132e-08 "abundance" 1527 1374 +"Faecalibacterium_SGB15315" "reads" "reads" "reads" -0.231290341659002 0.137902362827872 0.429596012931895 0.569878214031855 4.57442856203967e-09 4.16430738061542e-08 "abundance" 1527 619 +"Collinsella_SGB14861" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.571425291452041 1.2291432768023 0.433127923005589 0.573007421498254 0.0326642798325978 0.056454139939809 "abundance" 1527 593 +"Roseburia_hominis" "reads" "reads" "reads" -0.420942060579675 0.0979987908717678 0.435381866514542 0.575599571833163 2.21008188316433e-09 2.14114354919407e-08 "abundance" 1527 876 +"Lachnospira_sp_NSJ_43" "diagnosis" "CD" "diagnosisCD" -0.402697935013216 0.401206973114788 0.436707000542725 0.576571269635463 1.78773197901108e-20 1.45218843833516e-18 "abundance" 1527 296 +"Ruminococcus_lactaris" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.741372293227322 1.22234822143541 0.437441559546907 0.576811327493177 0.00270844668911544 0.00672969342048447 "abundance" 1527 379 +"Roseburia_hominis" "antibiotics" "Yes" "antibioticsYes" 0.249047286768079 0.38254722094958 0.439051708120909 0.578494293774954 6.25742773507081e-05 0.000242045556345596 "abundance" 1527 876 +"Roseburia_faecis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.582195325398 0.410859398947221 0.439939327191873 0.579273211140781 0.00127020938061971 0.00342178853554697 "abundance" 1527 922 +"Fusicatenibacter_saccharivorans" "age" "age" "age" -0.106050137727707 0.0684975505583294 0.440511273895319 0.579635709893235 0.000456811724813188 0.0013861873028814 "abundance" 1527 1119 +"Veillonella_dispar" "antibiotics" "Yes" "antibioticsYes" 0.350737909610425 0.527119236141694 0.440899639885826 0.579756323241524 0.0265923880339193 0.0471959021240652 "abundance" 1527 526 +"Bacteroides_uniformis" "diagnosis" "UC" "diagnosisUC" 0.285618297930503 0.185985078742905 0.441859758497469 0.579799614792462 0.0195044265360597 0.0361980218314219 "abundance" 1527 1244 +"Eisenbergiella_massiliensis" "diagnosis" "UC" "diagnosisUC" 0.446772884448835 0.444699186834557 0.441960417636161 0.579799614792462 0.015980976072942 0.0306277871742772 "abundance" 1527 417 +"Dorea_longicatena" "diagnosis" "UC" "diagnosisUC" -0.123026084255428 0.160261100670381 0.442689029198673 0.58015718514702 0.00155841384307776 0.00403354171149537 "prevalence" 1527 1020 +"Sutterella_wadsworthensis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.13717924106811 0.945565085274681 0.447218991062005 0.584916940117241 0.0213330713029316 0.0389079849670047 "abundance" 1527 536 +"Clostridium_sp_AM22_11AC" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.0165686711095 0.795916315279133 0.455496118328134 0.591781526072588 0.00456736030204899 0.0104623264185764 "abundance" 1527 730 +"Lacrimispora_celerecrescens" "reads" "reads" "reads" -0.404733347180177 0.081398851030776 0.463714042688519 0.599667266322545 1.12456560594294e-05 5.49787629572104e-05 "abundance" 1527 756 +"Collinsella_aerofaciens" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.224178523276314 0.571764202963262 0.473143612667376 0.608638985616888 3.08763944807733e-08 2.45153929110501e-07 "abundance" 1527 698 +"Flavonifractor_plautii" "reads" "reads" "reads" -0.286616113709158 0.0722194787319339 0.475668146604951 0.610249847180531 3.20391383314708e-15 8.67521284052131e-14 "abundance" 1527 1224 +"Roseburia_inulinivorans" "age" "age" "age" -0.104308832803375 0.081621506674866 0.475521898233815 0.610249847180531 0.0221599011074791 0.040207655617694 "abundance" 1527 951 +"Lachnospira_eligens" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.965450756849713 0.763315087306754 0.476286716591063 0.610271635553402 5.67260042131495e-06 2.92208099751638e-05 "abundance" 1527 929 +"Coprococcus_eutactus" "age" "age" "age" -0.172004428088089 0.203997575885318 0.47884266364871 0.611941507370556 3.81300974182399e-18 1.67772428640256e-16 "abundance" 1527 177 +"GGB9453_SGB14844" "age" "age" "age" 0.132048287403424 0.174896197226355 0.47971341487473 0.612253437403804 4.87726567782064e-10 5.47914101678575e-09 "abundance" 1527 222 +"Phocaeicola_plebeius" "age" "age" "age" -0.205043826198091 0.257568883988357 0.481769324808392 0.614476018717753 0.000173360680632056 0.000602200259037667 "abundance" 1527 127 +"Bacteroides_thetaiotaomicron" "reads" "reads" "reads" -0.271311193436706 0.0981748070888735 0.488832264924053 0.621860837019271 6.76720730424126e-09 5.90592637461055e-08 "abundance" 1527 1062 +"GGB3746_SGB5089" "antibiotics" "Yes" "antibioticsYes" -0.453906500315017 0.52779119256824 0.489539398950136 0.622355228073238 6.74973445600449e-08 4.91566867968327e-07 "abundance" 1527 651 +"Bacteroides_stercoris" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.493891551003569 1.29627021529316 0.491744004786368 0.624345539540327 2.97779845893323e-07 1.91741169063017e-06 "abundance" 1527 826 +"Ruminococcus_bicirculans" "diagnosis" "CD" "diagnosisCD" 0.127261303409168 0.240208850436182 0.492680749063281 0.625128690694578 8.04170195744968e-11 1.11737332461406e-09 "abundance" 1527 678 +"Clostridium_sp_AF36_4" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.212482598684233 0.885873479654236 0.497819104253097 0.630829137296077 0.0389052695368909 0.0654779098311312 "abundance" 1527 568 +"Phocaeicola_sartorii" "reads" "reads" "reads" -0.24032275517376 0.148319954633865 0.498560197418292 0.631358798286029 1.08347420275714e-43 1.14414875811154e-40 "abundance" 1527 424 +"Acidaminococcus_intestini" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.372439074896268 0.852709518277094 0.501364141143411 0.6332520247974 0.00272477602766555 0.00673855617146329 "abundance" 1527 173 +"Clostridium_sp_1001270H_150608_G6" "reads" "reads" "reads" 0.0647461869101004 0.0970162141246535 0.50453268981021 0.636036694122033 0.0562747318956487 0.0896321521595852 "prevalence" 1527 141 +"Phascolarctobacterium_faecium" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.503953367664595 1.35179398996216 0.505085112834335 0.636278689527905 0.0057981290731106 0.0128630762630353 "abundance" 1527 503 +"Clostridium_sp_AF36_4" "age" "age" "age" 0.0761626879429011 0.0836889506428218 0.510442634891081 0.641830700500111 1.50813304712405e-05 7.0781711011689e-05 "abundance" 1527 568 +"Clostridium_sp_AT4" "age" "age" "age" -0.0376491658759323 0.0576909012087598 0.514013249472883 0.645075073519597 0.0135142387902334 0.0265754863361015 "prevalence" 1527 528 +"Bilophila_wadsworthia" "reads" "reads" "reads" -0.284749365163715 0.0851647614994447 0.522514258516207 0.651915663165008 8.37266747584101e-10 9.11498644792589e-09 "abundance" 1527 764 +"Enterocloster_bolteae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.132501259747353 0.208618245541916 0.525338776349198 0.654663245526998 1.01796571169895e-10 1.37238126202257e-09 "prevalence" 1527 866 +"Waltera_intestinalis" "diagnosis" "UC" "diagnosisUC" -0.177868741493702 0.34416023022074 0.529265505216186 0.659136263347627 2.92928616689519e-05 0.000128353783910428 "abundance" 1527 524 +"Dialister_invisus" "diagnosis" "UC" "diagnosisUC" 0.0925954348154485 0.14743843420642 0.529985731566163 0.659612814955594 0.0155920720428739 0.0299913079731783 "prevalence" 1527 726 +"Collinsella_SGB14861" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.738106676518818 0.817492407946793 0.536407972909958 0.664732660882221 2.07317702958967e-10 2.54566853865895e-09 "abundance" 1527 593 +"Enterocloster_bolteae" "diagnosis" "UC" "diagnosisUC" -0.136299872394427 0.271377483313512 0.537856907066918 0.666015460335081 1.02668673958128e-10 1.37238126202257e-09 "abundance" 1527 866 +"Phocaeicola_coprocola" "age" "age" "age" 0.231791521456782 0.381561941741816 0.538276310246363 0.666112672717792 0.00651988092955542 0.0143437380450219 "abundance" 1527 101 +"Tyzzerella_nexilis" "age" "age" "age" -0.145550831510805 0.196924163134201 0.541080114810564 0.668312607041619 0.0505076464853215 0.0824545233645662 "abundance" 1527 188 +"Candidatus_Cibionibacter_quicibialis" "diagnosis" "UC" "diagnosisUC" 0.255736454356222 0.222572520064341 0.54250694495533 0.66965165536495 0.000173217179042973 0.000602200259037667 "abundance" 1527 933 +"GGB16040_SGB9347" "diagnosis" "CD" "diagnosisCD" 0.420981415698367 0.795210596667921 0.5440999087721 0.671193953119119 0.0194637690250078 0.0361861621310004 "abundance" 1527 114 +"Bacteroides_caccae" "age" "age" "age" -0.0855990374181257 0.0698031211066372 0.546619119763422 0.673876189285632 0.0154292919282949 0.0297455042124643 "abundance" 1527 958 +"Lacrimispora_amygdalina" "diagnosis" "UC" "diagnosisUC" -0.0930645341887249 0.15476763706502 0.547628339730052 0.674694688418993 0.00251217555704128 0.00627153046864207 "prevalence" 1527 865 +"Lacrimispora_celerecrescens" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.797896515577419 0.630903501130393 0.553447217272383 0.680576376683598 0.00140103162536903 0.00370799347466088 "abundance" 1527 756 +"Clostridium_leptum" "diagnosis" "UC" "diagnosisUC" -0.117803314219657 0.25714453643051 0.559910125064144 0.687226372095061 0.016809152047811 0.0319252959756986 "abundance" 1527 652 +"Waltera_intestinalis" "antibiotics" "Yes" "antibioticsYes" 0.295836101342134 0.623993345910793 0.566172718673783 0.693605951278102 0.00649687683279211 0.0143229685499551 "abundance" 1527 524 +"Proteus_mirabilis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.355229005919498 1.31635514472236 0.567755475623382 0.695109147473739 0.000106584859353541 0.00038678217002522 "abundance" 1527 100 +"Bilophila_wadsworthia" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.812120285129269 2.26345578753337 0.591166517543058 0.71481396985095 0.00175675773153469 0.00450275768082679 "abundance" 1527 764 +"Roseburia_faecis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.060574746033101 0.851848619996626 0.592963265278594 0.716543117102271 0.00942059469030667 0.0196603715275965 "abundance" 1527 922 +"Parasutterella_SGB9260" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.130419996543303 0.998455722217896 0.598296872970929 0.721649438139009 0.0455690869963576 0.0755431018338361 "abundance" 1527 269 +"Veillonella_rogosae" "age" "age" "age" 0.137390181548123 0.264760375128577 0.599728767939851 0.722484594669832 1.28260716142734e-05 6.18462631263593e-05 "abundance" 1527 207 +"Anaerostipes_hadrus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.0260176343282094 0.409807897735397 0.60653344234558 0.72978223296999 5.88932656925177e-17 2.00617059907415e-15 "abundance" 1527 1128 +"Proteus_mirabilis" "age" "age" "age" 0.274574714679921 0.55081934991385 0.610053585522144 0.732214192942426 0.00493925085621435 0.0111449762909452 "abundance" 1527 100 +"Faecalibacterium_prausnitzii" "antibiotics" "Yes" "antibioticsYes" -0.201371075134203 0.185788901631579 0.61059008990468 0.732408247804631 0.000589626649579048 0.00172957150543187 "abundance" 1527 1374 +"Waltera_intestinalis" "diagnosis" "CD" "diagnosisCD" -0.254922761478036 0.332823027336674 0.610984628539372 0.7324318798564 7.98799200426177e-09 6.85798337926864e-08 "abundance" 1527 524 +"Clostridiaceae_bacterium" "reads" "reads" "reads" -0.303511116624222 0.0709582341424638 0.614142425547133 0.735315134509251 2.72553793984456e-11 4.05375783728993e-10 "abundance" 1527 1109 +"Oscillibacter_sp_ER4" "age" "age" "age" -0.0810614883103598 0.0962852503133065 0.615274731095737 0.735779257053333 3.5106703771254e-11 5.07844920307455e-10 "abundance" 1527 458 +"Dysosmobacter_sp_BX15" "age" "age" "age" 0.0536275616909017 0.0813286663567586 0.62190997932232 0.740982987558423 0.0508360434857222 0.0828294383899496 "abundance" 1527 621 +"Phocaeicola_dorei" "diagnosis" "UC" "diagnosisUC" -0.192256003965362 0.505720157207512 0.625148321611947 0.744387459128424 0.0234675096141935 0.0422895736392292 "abundance" 1527 769 +"GGB16040_SGB9347" "reads" "reads" "reads" -0.223800166685805 0.241845853993018 0.626782604221682 0.745878933403877 0.00859623819383635 0.0182281677363277 "abundance" 1527 114 +"Escherichia_coli" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.719350786500662 0.619280491847966 0.628710986416319 0.746809281129171 0.0100766303547082 0.0206287496292087 "abundance" 1527 707 +"Dysgonomonas_mossii" "reads" "reads" "reads" -0.664481978451737 0.66730725478326 0.632472496277504 0.749466385498151 0.0431089864932009 0.0718029806574451 "abundance" 1527 31 +"Bacteroides_thetaiotaomicron" "antibiotics" "Yes" "antibioticsYes" -0.0976413945472647 0.204169825175959 0.63248212368805 0.749466385498151 0.0106743329306982 0.0215527640053869 "prevalence" 1527 1062 +"Ruminococcus_bromii" "diagnosis" "UC" "diagnosisUC" -0.111305079880547 0.334347999446315 0.635576951426125 0.752221298053694 9.23974775305428e-10 9.75717362722532e-09 "abundance" 1527 429 +"Clostridium_fessum" "reads" "reads" "reads" -0.380815460316237 0.0782020612349218 0.637117453644426 0.753588077736808 2.48356378859811e-10 2.94679029298832e-09 "abundance" 1527 926 +"Vescimonas_coprocola" "diagnosis" "UC" "diagnosisUC" -0.0765046149126976 0.256108956992886 0.646879821563787 0.762826295314206 1.11040607573464e-13 2.44289336661621e-12 "abundance" 1527 599 +"Firmicutes_bacterium_AF16_15" "diagnosis" "CD" "diagnosisCD" 0.0485431372646013 0.206823386498583 0.649450525390963 0.763553746458449 3.38180894135542e-13 6.61331526309504e-12 "abundance" 1527 827 +"GGB3304_SGB4367" "diagnosis" "CD" "diagnosisCD" 0.170128446639766 0.504985719203485 0.649103457922034 0.763553746458449 0.0112163627371538 0.0225180210084304 "abundance" 1527 155 +"Clostridiaceae_bacterium" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.109715352152068 0.639089186252863 0.66037376200036 0.772287575113954 5.71890189621809e-06 2.93163126330403e-05 "abundance" 1527 1109 +"Ruminococcus_lactaris" "reads" "reads" "reads" -0.28564238139322 0.126756437898661 0.662515403957131 0.77425544218435 0.00137688964260975 0.00365325493114547 "abundance" 1527 379 +"GGB3175_SGB4191" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.694680918805379 2.15148529729637 0.671669796266277 0.782147069072888 0.0261854928532953 0.0465519872947472 "abundance" 1527 154 +"Roseburia_inulinivorans" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.00757344162253355 0.466280244320755 0.672118970823026 0.782203972000115 5.57419239994225e-05 0.00022046244098648 "abundance" 1527 951 +"Alistipes_shahii" "diagnosis" "CD" "diagnosisCD" -0.17058353894824 0.186092442094295 0.675876278407224 0.783310941878835 1.10352609303293e-10 1.43867105462071e-09 "abundance" 1527 673 +"Bifidobacterium_adolescentis" "age" "age" "age" 0.0640522140919381 0.151025694691237 0.679829256356359 0.78602743604753 0.000508369581235354 0.0015164923101258 "abundance" 1527 427 +"Anaerostipes_hadrus" "antibiotics" "Yes" "antibioticsYes" -0.209455552991655 0.290043755683384 0.682205094032492 0.788307956084854 1.04093262097725e-10 1.37403105968997e-09 "abundance" 1527 1128 +"Clostridium_fessum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.768233499356963 0.88206314451912 0.685577179366406 0.78986899085021 5.95950237301376e-05 0.000233082759477872 "abundance" 1527 926 +"Bacteroides_cellulosilyticus" "reads" "reads" "reads" -0.281491019573072 0.148828167205976 0.687278880868568 0.790896898243334 0.0358469706311397 0.0610554854620702 "abundance" 1527 433 +"Ruminococcus_gnavus" "diagnosis" "CD" "diagnosisCD" 0.0516347391495031 0.265668510224433 0.693253539833222 0.795897424696895 0.0530582968119712 0.0854109168192708 "abundance" 1527 767 +"Vescimonas_coprocola" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.55040254145698 0.823811044489415 0.695014417110262 0.797450482110072 2.28949645466474e-05 0.000103320865646409 "abundance" 1527 599 +"Veillonella_rogosae" "reads" "reads" "reads" 0.0303678116610193 0.0777817209975112 0.696223414274564 0.798144278368627 0.00463983562827457 0.0106053385789133 "prevalence" 1527 207 +"GGB3175_SGB4191" "age" "age" "age" -0.118219158748309 0.264250567958447 0.70350014299463 0.80341278749942 0.00995647002054879 0.0205352194173819 "abundance" 1527 154 +"Haemophilus_parainfluenzae" "diagnosis" "CD" "diagnosisCD" -0.183705533159397 0.262537900870584 0.70565633192075 0.804934309733302 0.00351492533123133 0.00839764966013639 "abundance" 1527 674 +"Ruminococcus_torques" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.367276057895645 0.337711723308195 0.715387437244765 0.811769484539066 0.0002918584112017 0.000966151981909076 "abundance" 1527 1093 +"Dialister_invisus" "reads" "reads" "reads" -0.30977158640868 0.0880108373753003 0.726884466362687 0.820527005934542 0.0106371605934135 0.0215188536142617 "abundance" 1527 726 +"Parasutterella_excrementihominis" "reads" "reads" "reads" -0.37777292381325 0.101551168266771 0.732317585946003 0.823330588572204 0.000474166919899569 0.00143062933546841 "abundance" 1527 699 +"Ruminococcus_bromii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.989867646516389 1.7077915537331 0.731737930343756 0.823330588572204 0.0581270782621667 0.0920272783281081 "abundance" 1527 429 +"Ruminococcus_bromii" "age" "age" "age" 0.041400209428922 0.115421050266393 0.733362542854155 0.824031287370339 4.82832777539553e-07 3.03494888739147e-06 "abundance" 1527 429 +"Prevotella_copri_clade_A" "reads" "reads" "reads" -0.427155149112215 0.253989788350063 0.737304943346798 0.827034362399336 1.82190059048702e-09 1.79806263883579e-08 "abundance" 1527 289 +"Bacteroides_eggerthii" "diagnosis" "UC" "diagnosisUC" 0.27848839875074 0.586947483398683 0.738350052210606 0.827731498576892 0.00515331265993169 0.0115785067423146 "abundance" 1527 409 +"GGB16040_SGB9347" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.877170828806685 1.9872722932362 0.740286855824368 0.828636954141075 0.0269923095175971 0.0477451907044933 "abundance" 1527 114 +"Clostridium_sp_AF36_4" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.464919024395624 0.722791435321135 0.742121778832372 0.829105749478819 1.6321369214567e-06 9.36704667966454e-06 "abundance" 1527 568 +"Flavonifractor_plautii" "age" "age" "age" 0.0301790394646403 0.0736007210489943 0.744492819948142 0.830804666007235 1.41555867072804e-10 1.77955947177239e-09 "abundance" 1527 1224 +"GGB3175_SGB4191" "diagnosis" "UC" "diagnosisUC" 0.350065484158174 0.845686469658257 0.748407108034491 0.834696055422029 4.27188076959914e-10 4.90337618771379e-09 "abundance" 1527 154 +"Roseburia_intestinalis" "diagnosis" "CD" "diagnosisCD" -0.16912372385162 0.273279203285783 0.748900376288397 0.83476972918855 0.00142891041086188 0.00376404562906243 "abundance" 1527 842 +"Firmicutes_bacterium_AF16_15" "antibiotics" "Yes" "antibioticsYes" -0.206029015871053 0.392931804216462 0.752946416205297 0.83784584126717 6.81907933215873e-05 0.000260903904882595 "abundance" 1527 827 +"Clostridium_sp_AM49_4BH" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.340620346153377 1.81765753855913 0.758374003245763 0.84292537107066 0.00795081290132067 0.0170305444701716 "abundance" 1527 344 +"Clostridium_leptum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.705947144091955 0.973465788148615 0.759626877248579 0.843824537647753 0.00339103429717191 0.00817564433290761 "abundance" 1527 652 +"Eubacterium_ventriosum" "reads" "reads" "reads" -0.305288817062464 0.117438351446847 0.76004666645857 0.843824537647753 0.00859478645727681 0.0182281677363277 "abundance" 1527 520 +"Waltera_intestinalis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 1.06243599326144 2.22601414760552 0.767262207983206 0.848941310531814 0.00362924436974928 0.00863073459032252 "abundance" 1527 524 +"Lacrimispora_amygdalina" "reads" "reads" "reads" -0.31796834811849 0.0770466816250928 0.768567190131149 0.849903955583624 2.23340956216223e-07 1.4833210677002e-06 "abundance" 1527 865 +"Ruthenibacterium_lactatiformans" "antibiotics" "Yes" "antibioticsYes" -0.178304390773983 0.322817205919828 0.77073185571222 0.851815636912714 0.027566057816363 0.048516261756799 "abundance" 1527 797 +"Phocaeicola_dorei" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.0660729385986633 0.997553494011896 0.779191439595399 0.858252577773061 0.000448200350627406 0.00136791783312873 "abundance" 1527 769 +"Phocaeicola_massiliensis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.0914806511538287 1.76790454193785 0.781350457413657 0.860145799316217 0.00346645394170257 0.00830062440462113 "abundance" 1527 396 +"Alistipes_shahii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.79425862012513 1.44659240884184 0.788000957982785 0.865807902065088 0.00142933929664208 0.00376404562906243 "abundance" 1527 673 +"Ruminococcus_torques" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.21270841820197 0.685775145222172 0.7884357625218 0.865807902065088 2.16284270332316e-06 1.18956348682774e-05 "abundance" 1527 1093 +"Clostridiaceae_bacterium" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.106403327448912 0.356839967070533 0.792630721164941 0.868340512287705 6.59934376799586e-12 1.05589500287934e-10 "abundance" 1527 1109 +"Blautia_wexlerae" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.546367109265639 0.508346124790324 0.795994745413471 0.869396856056931 1.32918335547268e-06 7.75479349933229e-06 "abundance" 1527 1302 +"Fusicatenibacter_saccharivorans" "antibiotics" "Yes" "antibioticsYes" -0.153548843940413 0.2686780678305 0.797239057992351 0.8697870204266 1.51480578230384e-08 1.24002705900221e-07 "abundance" 1527 1119 +"Bacteroides_fragilis" "age" "age" "age" -0.0490793624573853 0.112911840187518 0.800821148867599 0.870529033120571 0.012025335982537 0.0239599147123756 "abundance" 1527 787 +"Coprococcus_eutactus" "reads" "reads" "reads" 0.0222577346052306 0.0883072101694023 0.801003271948323 0.870529033120571 0.0177622185030961 0.033554387726779 "prevalence" 1527 177 +"GGB3278_SGB4328" "age" "age" "age" 0.0199600311928235 0.0786504471588684 0.799664339621696 0.870529033120571 0.00328710005333441 0.00794536465955607 "prevalence" 1527 179 +"Parabacteroides_distasonis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.118530349679738 0.333627660410167 0.807193250953468 0.875766580990048 1.61725054674869e-18 8.13245989222198e-17 "abundance" 1527 1140 +"GGB9480_SGB14874" "antibiotics" "Yes" "antibioticsYes" -0.200741674320702 0.501953575363184 0.807827557242683 0.875968394479579 0.0454474011860175 0.0754598359315008 "abundance" 1527 332 +"Bifidobacterium_longum" "diagnosis" "UC" "diagnosisUC" 0.00132619402039969 0.244116426493603 0.825222941489371 0.890876037386868 0.00159180188081819 0.00410988456269929 "abundance" 1527 843 +"Clostridium_fessum" "diagnosis" "UC" "diagnosisUC" 0.0143069620324046 0.18912983749492 0.833499828767982 0.895851851162067 2.50861518403682e-09 2.40827057667535e-08 "abundance" 1527 926 +"Oscillospiraceae_bacterium" "reads" "reads" "reads" -0.283308591895949 0.286616317888454 0.838186522699408 0.899899156788266 0.0363538433555989 0.061819095947685 "abundance" 1527 81 +"Roseburia_intestinalis" "reads" "reads" "reads" -0.317357582340671 0.118055227720415 0.838135130169146 0.899899156788266 0.0227029532285806 0.0411223303762969 "abundance" 1527 842 +"Clostridiaceae_bacterium" "antibiotics" "Yes" "antibioticsYes" -0.0143720187620967 0.253544291098084 0.849315311265783 0.91084638760337 0.00762655069289624 0.0164359949626499 "abundance" 1527 1109 +"Alistipes_onderdonkii" "diagnosis" "CD" "diagnosisCD" -0.121015960302164 0.230039678802752 0.850416999956428 0.911289623468041 7.60554717040635e-06 3.8612777942063e-05 "abundance" 1527 831 +"Ruminococcus_gnavus" "antibiotics" "Yes" "antibioticsYes" -0.137090110933387 0.303999264424169 0.85149355829676 0.911289623468041 0.015193689180121 0.0294395151820327 "abundance" 1527 767 +"Bacteroides_caccae" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.543046275647542 0.775883343593131 0.861299464158776 0.918656742885506 3.03224134529812e-06 1.60906877418835e-05 "abundance" 1527 958 +"Oscillibacter_sp_ER4" "diagnosis" "UC" "diagnosisUC" 0.13079891306242 0.266531863419685 0.861003445252252 0.918656742885506 1.2340775472217e-06 7.25566929489219e-06 "abundance" 1527 458 +"Ruminococcus_lactaris" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -0.0150958219429144 2.40522080367539 0.862584581555387 0.919525516835366 0.00705581611649268 0.0153307488421677 "abundance" 1527 379 +"Clostridium_sp_AM49_4BH" "diagnosis" "UC" "diagnosisUC" 0.135657382124954 0.357399426300144 0.876776205691764 0.931098209740058 5.02369888756548e-20 3.5366840168461e-18 "abundance" 1527 344 +"Clostridiaceae_bacterium_Marseille_Q4149" "reads" "reads" "reads" -0.375537216584567 0.232007327170479 0.88510094757896 0.937391464265196 0.0389395145586652 0.0654779098311312 "abundance" 1527 181 +"Alistipes_onderdonkii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.782053047259514 2.79551051792812 0.892094153828011 0.939198263243499 0.000681189136057081 0.00196539816304994 "abundance" 1527 831 +"Bacteroides_fragilis" "reads" "reads" "reads" -0.35747819508664 0.108252456401924 0.889002087495247 0.939198263243499 0.00118062051053409 0.00318858122538107 "abundance" 1527 787 +"Roseburia_sp_AF02_12" "reads" "reads" "reads" -0.318171378238208 0.174041721240826 0.891988803768242 0.939198263243499 2.33267586995721e-05 0.000103936950155055 "abundance" 1527 363 +"Clostridiales_bacterium" "age" "age" "age" -0.0271599848445878 0.0766109846099001 0.897828739596412 0.942696054363992 1.00946383700426e-05 5.00466578345776e-05 "abundance" 1527 985 +"Eubacterium_ventriosum" "diagnosis" "CD" "diagnosisCD" -0.0286843587298497 0.27299720798148 0.897434936111436 0.942696054363992 1.23766324916208e-08 1.02911211898831e-07 "abundance" 1527 520 +"Dialister_invisus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.271339673164679 0.374355880936453 0.903137817396489 0.94591587118832 0.0512735977001661 0.0831719188500391 "abundance" 1527 726 +"Bacteroides_faecis" "age" "age" "age" 0.0073763882734909 0.0599893094000828 0.90213741606237 0.94591587118832 0.00133813890139643 0.00358648395907267 "prevalence" 1527 434 +"GGB9708_SGB15234" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.0146791234712372 1.66495764153281 0.903903001956861 0.946023816723999 6.07036094353778e-05 0.000235672836631467 "abundance" 1527 282 +"Alistipes_finegoldii" "diagnosis" "CD" "diagnosisCD" -0.0369087389917938 0.229120410162151 0.907747524520684 0.94801638851599 0.0282217736050048 0.0494232055172223 "abundance" 1527 639 +"Clostridium_sp_AF36_4" "diagnosis" "UC" "diagnosisUC" 0.106511147649825 0.230554456776405 0.911378637796851 0.950556056551716 1.25706623068146e-07 8.84974626399746e-07 "abundance" 1527 568 +"Bacteroides_caccae" "diagnosis" "UC" "diagnosisUC" 0.102913144798996 0.188440819729656 0.912304511203933 0.950742941275992 0.0393893339675128 0.06612899311557 "abundance" 1527 958 +"Akkermansia_muciniphila" "antibiotics" "Yes" "antibioticsYes" -0.145020146761192 0.710052890548739 0.92048426649509 0.956716094006067 0.000973499412285599 0.00271961740575024 "abundance" 1527 407 +"Ruminococcus_bicirculans" "reads" "reads" "reads" -0.353006888505678 0.108263864318466 0.920273911202381 0.956716094006067 3.67735915359591e-05 0.00015721826988653 "abundance" 1527 678 +"Phocaeicola_sartorii" "antibiotics" "Yes" "antibioticsYes" -0.117452569681855 0.446315080474444 0.924545622071121 0.959406343880494 0.00704983231818668 0.0153307488421677 "abundance" 1527 424 +"Clostridium_sp_AM22_11AC" "reads" "reads" "reads" -0.351303926591622 0.100215385438372 0.927737149046365 0.961696758215702 7.24150026629803e-10 7.96565029292783e-09 "abundance" 1527 730 +"Proteus_mirabilis" "antibiotics" "Yes" "antibioticsYes" -0.030360467478515 0.341769867343877 0.929214573356534 0.962717537825381 0.009516503262221 0.0198213559071112 "prevalence" 1527 100 +"Clostridium_leptum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.119676832578604 1.14206592854268 0.931888295093426 0.963406325203994 2.72772458048866e-08 2.18217966439092e-07 "abundance" 1527 652 +"Faecalibacterium_SGB15346" "age" "age" "age" -0.0229242659607681 0.0994154948365055 0.932056720205144 0.963406325203994 0.036519185035181 0.0620004170372205 "abundance" 1527 743 +"GGB9480_SGB14874" "reads" "reads" "reads" -0.3310359380185 0.125346083165293 0.931684948610272 0.963406325203994 0.0188097604845888 0.0352182749498683 "abundance" 1527 332 +"Tyzzerella_nexilis" "reads" "reads" "reads" 0.00685417499192598 0.0802624823319651 0.931945780202914 0.963406325203994 0.0440479660883677 0.0732514207705768 "prevalence" 1527 188 +"Veillonella_dispar" "reads" "reads" "reads" 0.00484758565500632 0.0571007356128399 0.932344606428225 0.963406325203994 0.00135210908012502 0.00361475237623296 "prevalence" 1527 526 +"Ruminococcus_bromii" "reads" "reads" "reads" -0.352448680552171 0.125233914148484 0.934109935763373 0.964720303637226 0.0323447270760674 0.05599349474152 "abundance" 1527 429 +"Bifidobacterium_longum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.461584842481971 0.819377444631858 0.944816967571267 0.970232774439411 2.81305773711613e-06 1.50029745979527e-05 "abundance" 1527 843 +"Candidatus_Cibionibacter_quicibialis" "reads" "reads" "reads" -0.348241731084129 0.087276584871975 0.944909401104504 0.970232774439411 1.01782293703705e-06 6.07243514978034e-06 "abundance" 1527 933 +"GGB3278_SGB4328" "antibiotics" "Yes" "antibioticsYes" 0.0294065683677828 1.55929390426584 0.948218241203555 0.97213744474542 0.00830871028010338 0.0177611296675894 "abundance" 1527 179 +"Dysosmobacter_sp_BX15" "diagnosis" "CD" "diagnosisCD" -0.0537400545901098 0.194439183326374 0.951583759251912 0.973697818343111 0.000432211010165397 0.00132678728701936 "abundance" 1527 621 +"Dysosmobacter_welbionis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.369611457754359 0.556756296690678 0.954192357025876 0.973697818343111 9.00470122983415e-10 9.60501464515643e-09 "abundance" 1527 1191 +"Roseburia_faecis" "reads" "reads" "reads" -0.336062161151159 0.0958596750985624 0.952601680069244 0.973697818343111 8.94231894618965e-05 0.000331336449374606 "abundance" 1527 922 +"Clostridium_sp_AM49_4BH" "antibiotics" "Yes" "antibioticsYes" -0.118223616393049 0.82910441250851 0.956795362326706 0.975387823258653 0.00447023445249914 0.0103069161175526 "abundance" 1527 344 +"Clostridiales_bacterium" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.431411691002504 0.713377935755325 0.969963366896388 0.984575802034048 0.000113159920435507 0.000407839167166879 "abundance" 1527 985 +"GGB9453_SGB14844" "reads" "reads" "reads" 0.00265447091850849 0.0747967580877779 0.971689724078076 0.985304473714873 0.0097306055031355 0.020187660925955 "prevalence" 1527 222 +"Ruthenibacterium_lactatiformans" "age" "age" "age" -0.00639161621432833 0.0959384733747123 0.974450735793846 0.986456741542597 0.00049376349319861 0.00148129047959583 "abundance" 1527 797 +"Dorea_longicatena" "age" "age" "age" 0.00183460691316255 0.0581827450462006 0.974845428822291 0.986456741542597 0.0627052348366188 0.097953739626434 "prevalence" 1527 1020 +"Odoribacter_splanchnicus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.435062370230235 1.26569650247248 0.980282175959534 0.990351389903266 0.00154695025014315 0.00401370875712818 "abundance" 1527 757 +"Alistipes_communis" "antibiotics" "Yes" "antibioticsYes" -0.0776616300534455 0.484682919148901 0.992104606972957 0.9977212568323 0.00153573432019668 0.00399442227125048 "abundance" 1527 407 +"Dorea_longicatena" "antibiotics" "Yes" "antibioticsYes" -0.0691249534609105 0.274348340910798 0.99124498998508 0.9977212568323 2.40372386716661e-06 1.30170892498869e-05 "abundance" 1527 1020 +"Lachnospira_sp_NSJ_43" "reads" "reads" "reads" 0.000840132705193556 0.0734764293746029 0.990877151838764 0.9977212568323 0.0549179930581225 0.0877358557781806 "prevalence" 1527 296 +"Acidaminococcus_intestini" "diagnosis" "CD" "diagnosisCD" -0.070412467846994 0.5243305446312 0.997720221684156 1 4.46907381039028e-05 0.000182920230378765 "abundance" 1527 173 +"Bacteroides_xylanisolvens" "diagnosis" "CD" "diagnosisCD" -0.0686055837521586 0.284139918435159 0.999363903820648 1 0.00117044375123687 0.00317235770359829 "abundance" 1527 959 +"Blautia_obeum" "reads" "reads" "reads" -0.342059763368912 0.0890453651171258 0.999083166228402 1 5.65328327095498e-12 9.18441097558225e-11 "abundance" 1527 899 +"Dialister_invisus" "diagnosis" "CD" "diagnosisCD" -0.0691179090086256 0.215805230189702 0.999228428341649 1 0.00152319961400621 0.00397160195651991 "abundance" 1527 726 +"Eubacterium_ventriosum" "diagnosis" "UC" "diagnosisUC" 0.0724274406349542 0.274207648098216 1 1 0.0144582042327432 0.0282215594635431 "abundance" 1527 520 +"Faecalibacterium_SGB15346" "antibiotics" "Yes" "antibioticsYes" -0.0726334212119533 0.382225417907357 1 1 0.0294824518162531 0.0512907234233332 "abundance" 1527 743 +"Roseburia_hominis" "diagnosis" "UC" "diagnosisUC" 0.0713314243342626 0.231297547780313 0.99713766663187 1 1.39338587636345e-10 1.77278974149374e-09 "abundance" 1527 876 +"Bacteroides_uniformis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.91216678802023 0.249286811980001 1.57557434679908e-31 1.02622409121513e-28 1.03562580733296e-09 1.07095626071751e-08 "prevalence" 1527 1244 +"Prevotella_sp_885" "age" "age" "age" 1.12654958640405 0.117907354711774 1.24143807349854e-21 1.73269285401154e-19 0.0284346403610106 0.0497135434126278 "prevalence" 1527 69 +"Phocaeicola_vulgatus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.07499552699739 0.22791369881065 8.68215698916138e-20 8.92891302990597e-18 3.09965725167061e-05 0.0001347011546405 "prevalence" 1527 1288 +"Bacteroides_xylanisolvens" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.11589305393562 0.237580624458928 5.29069034396059e-19 4.30750372170791e-17 0.000435509216188956 0.00133303690520446 "prevalence" 1527 959 +"Alistipes_SGB2313" "age" "age" "age" 0.948827231527825 0.108607933095494 2.40953273085001e-18 1.62352653657963e-16 0.00203911772245435 0.00513641051154549 "prevalence" 1527 73 +"Alistipes_putredinis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.33808100042509 0.276244471653517 2.58779052109933e-17 1.48721843477297e-15 1.04629184205507e-06 6.20721452365255e-06 "prevalence" 1527 873 +"Bacteroides_cellulosilyticus" "age" "age" "age" 0.483046087139553 0.0577505597523975 6.0445524489214e-17 3.10817249610327e-15 0.000310900539584047 0.001013305462348 "prevalence" 1527 433 +"Alistipes_onderdonkii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.0757172526643 0.272076689959224 2.36283835706471e-14 8.8788195186624e-13 0.000119481257432774 0.000426257458949356 "prevalence" 1527 831 +"Lachnospira_sp_NSJ_43" "age" "age" "age" 0.485555504942005 0.0646379707137995 5.82647411235608e-14 1.99735621325329e-12 1.67119558325268e-06 9.5393650589991e-06 "prevalence" 1527 296 +"Faecalibacterium_SGB15346" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.47469182348837 0.340708771643527 3.77580078782151e-13 1.11786586960655e-11 0.000353660800112565 0.00113861525889899 "prevalence" 1527 743 +"Bacteroides_eggerthii" "diagnosis" "CD" "diagnosisCD" -1.09497123626742 0.151701139101413 5.27771146273275e-13 1.51656591149703e-11 0.00278807611162935 0.00687899152775838 "prevalence" 1527 409 +"Clostridium_symbiosum" "age" "age" "age" -0.458892178146771 0.0637094548668965 5.89496462265024e-13 1.64553726752265e-11 0.00925199434061286 0.0194468972426834 "prevalence" 1527 539 +"Parabacteroides_merdae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.87145083789235 0.265569064420255 1.82887341603219e-12 4.76482487323587e-11 4.46113354053423e-05 0.000182920230378765 "prevalence" 1527 826 +"Clostridium_sp_1001270H_150608_G6" "diagnosis" "UC" "diagnosisUC" -2.01963853163031 0.291937735592985 4.57917305174222e-12 1.09118343208589e-10 9.42805814342362e-05 0.000348112916064872 "prevalence" 1527 141 +"Firmicutes_bacterium_AF16_15" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.11762397868801 0.308788487074154 6.99064187085539e-12 1.6457487006809e-10 0.00177036891751259 0.0045266575711702 "prevalence" 1527 827 +"Klebsiella_pneumoniae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.80990917268872 0.264026695513922 7.13008533557568e-12 1.65859366020415e-10 1.89331146316363e-07 1.28162622121846e-06 "prevalence" 1527 119 +"Bacteroides_stercoris" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.81501680490523 0.265599878954788 8.27804338073771e-12 1.90297609011312e-10 4.19057287777136e-05 0.00017353901799712 "prevalence" 1527 826 +"Escherichia_coli" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.58269941990344 0.237310518764744 2.56994082209386e-11 5.4583308330124e-10 2.88657986402541e-15 8.02165351687061e-14 "prevalence" 1527 707 +"Firmicutes_bacterium_AF16_15" "age" "age" "age" -0.395468655671374 0.0604341950680898 5.99791762785304e-11 1.1603892123589e-09 0.00265955484226366 0.00662379696563778 "prevalence" 1527 827 +"Alistipes_finegoldii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.29328588205293 0.353627710290607 8.8714843364111e-11 1.66681542243724e-09 0.00486735339586319 0.0110536025506054 "prevalence" 1527 639 +"Alistipes_dispar" "age" "age" "age" 0.647112679305402 0.100548002969249 1.22777697147666e-10 2.20585620146455e-09 0.00441702562422153 0.0102065187290546 "prevalence" 1527 83 +"Ruminococcus_gnavus" "age" "age" "age" -0.356237544296215 0.0556901408754537 1.58688358979341e-10 2.79348696797868e-09 0.00449355217962244 0.0103381069753405 "prevalence" 1527 767 +"Eubacterium_siraeum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.63741575839949 0.425994737002803 5.97104317047952e-10 9.40920835090078e-09 0.0336441739451798 0.0574890739257442 "prevalence" 1527 565 +"Bacteroides_thetaiotaomicron" "age" "age" "age" 0.423277465595181 0.0686979872578095 7.20934167622241e-10 1.11802012978878e-08 8.7738086043565e-05 0.00032739017265726 "prevalence" 1527 1062 +"Alistipes_shahii" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.16481536636597 0.354870929274978 1.05876598997908e-09 1.55551033414971e-08 5.71075056408077e-05 0.000224184111363171 "prevalence" 1527 673 +"Bacteroides_fragilis" "diagnosis" "CD" "diagnosisCD" 0.818167940257252 0.135593728102286 1.5998377527805e-09 2.23291640638078e-08 3.14210990559616e-08 2.47617019426085e-07 "prevalence" 1527 787 +"Bacteroides_finegoldii" "diagnosis" "CD" "diagnosisCD" -0.979559017052654 0.162462100983812 1.6450668632326e-09 2.27975932677766e-08 0.000465042270612392 0.00140711930592174 "prevalence" 1527 333 +"Alistipes_communis" "diagnosis" "UC" "diagnosisUC" -1.03278891024742 0.175886453643015 4.30810238166504e-09 5.57485566475066e-08 0.00519659045250531 0.0116509543903304 "prevalence" 1527 407 +"Dysosmobacter_sp_BX15" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.18761246769794 0.372997545560324 4.49264335940862e-09 5.77541126597661e-08 3.16333579153394e-06 1.67024129792992e-05 "prevalence" 1527 621 +"Oscillibacter_sp_ER4" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -2.37451136778276 0.426573352649678 2.59938935772702e-08 3.05976313554132e-07 0.00370763344431835 0.00877861192197349 "prevalence" 1527 458 +"Eubacterium_siraeum" "diagnosis" "UC" "diagnosisUC" -0.838481254114895 0.150829466734738 2.71116105888103e-08 3.15333851729377e-07 0.00753779297446111 0.0163112897152273 "prevalence" 1527 565 +"Proteus_mirabilis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.80641369335236 0.32664333738513 3.198061123062e-08 3.59138588187538e-07 0.000364411575746848 0.00116611704238991 "prevalence" 1527 100 +"Parasutterella_SGB9260" "diagnosis" "UC" "diagnosisUC" 1.01089846627639 0.183372633876935 3.53149667628919e-08 3.92076392356198e-07 0.000107818077065502 0.00038991742938757 "prevalence" 1527 269 +"Enterocloster_clostridioformis" "age" "age" "age" 0.344674063737888 0.0629975825895747 4.46930840069012e-08 4.87878693572541e-07 1.23676181162935e-06 7.25566929489219e-06 "prevalence" 1527 312 +"Oscillospiraceae_bacterium" "diagnosis" "CD" "diagnosisCD" -2.05021773760355 0.391756577587101 1.66422669808752e-07 1.64237321619344e-06 0.000866748620027114 0.00243427272007615 "prevalence" 1527 81 +"Lacrimispora_celerecrescens" "age" "age" "age" -0.283621836229448 0.0554204734434387 3.09388186750276e-07 2.94899764346361e-06 0.0100799572051815 0.0206287496292087 "prevalence" 1527 756 +"Clostridium_sp_AF20_17LB" "diagnosis" "UC" "diagnosisUC" 0.710155421898195 0.146867071309604 1.32903703352824e-06 1.13900805417288e-05 9.72171121382814e-10 1.01644822196065e-08 "prevalence" 1527 654 +"Phocaeicola_dorei" "age" "age" "age" 0.270463343996737 0.0560619130962566 1.4044733618108e-06 1.19493884434226e-05 0.0133121161777281 0.0262268557531359 "prevalence" 1527 769 +"Bacteroides_salyersiae" "age" "age" "age" 0.379549101060757 0.0804857347540855 2.40844074544635e-06 1.95273577452372e-05 2.21759371155095e-06 1.21335697378124e-05 "prevalence" 1527 150 +"Barnesiella_intestinihominis" "diagnosis" "UC" "diagnosisUC" -0.73553644959084 0.156278794647275 2.51924541496735e-06 2.03413452101083e-05 0.00117160937916982 0.00317235770359829 "prevalence" 1527 431 +"Clostridium_leptum" "diagnosis" "CD" "diagnosisCD" -0.634722531358557 0.135351160848221 2.73940061177706e-06 2.18481175322954e-05 0.00478701791284752 0.0108945924913082 "prevalence" 1527 652 +"Phocaeicola_coprocola" "diagnosis" "UC" "diagnosisUC" 2.85722142441893 0.609799806407086 2.79267388898588e-06 2.21824584515383e-05 0.0373696248959798 0.063342413948884 "prevalence" 1527 101 +"Bacteroides_cellulosilyticus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.70190749883692 0.363307826868687 2.80674398625244e-06 2.22039584985315e-05 0.0150734828969404 0.029260290329355 "prevalence" 1527 433 +"Sutterella_wadsworthensis" "age" "age" "age" -0.271069776913136 0.0582278811432274 3.234682708682e-06 2.50816270347803e-05 2.85993348057012e-05 0.000125837073145085 "prevalence" 1527 536 +"Phocaeicola_coprocola" "diagnosis" "CD" "diagnosisCD" 2.79330473482964 0.606960436806911 4.18212221162288e-06 3.20465364765141e-05 0.0188072059124614 0.0352182749498683 "prevalence" 1527 101 +"Acidaminococcus_intestini" "age" "age" "age" 0.359666984390517 0.0782381975228576 4.28460201319881e-06 3.26149753214394e-05 0.0019080166986174 0.00483181207131888 "prevalence" 1527 173 +"Barnesiella_intestinihominis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.95261377025882 0.424774040989452 4.28968713286075e-06 3.26149753214394e-05 0.0110369005313418 0.022242303360872 "prevalence" 1527 431 +"Roseburia_intestinalis" "antibiotics" "Yes" "antibioticsYes" -0.838373244091449 0.185989162437174 6.55509228993913e-06 4.79724731630751e-05 0.00311982917327258 0.00760863650571789 "prevalence" 1527 842 +"Ruminococcus_gnavus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.00556926286834 0.22526372051923 8.04568816514109e-06 5.73769148711156e-05 2.77074474475114e-10 3.25100716717467e-09 "prevalence" 1527 767 +"Coprococcus_comes" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.32910070851843 0.531407013550703 1.17113004547374e-05 8.00135702397095e-05 0.0101179868474477 0.0206665263267017 "prevalence" 1527 759 +"Bacteroides_finegoldii" "antibiotics" "Yes" "antibioticsYes" 0.925610031794548 0.211989532504343 1.26368517578064e-05 8.60362659747514e-05 5.16002764749945e-06 2.68423113091597e-05 "prevalence" 1527 333 +"Bacteroides_ovatus" "diagnosis" "UC" "diagnosisUC" 0.872415936692854 0.199893780068723 1.27473535547357e-05 8.64872529373388e-05 4.06414653104648e-05 0.000169633942165418 "prevalence" 1527 1176 +"Ruminococcus_bromii" "diagnosis" "CD" "diagnosisCD" -0.608846110855863 0.140954023553676 1.56407209656072e-05 0.000103645098235258 0.0408828552235425 0.068527452565176 "prevalence" 1527 429 +"Dysosmobacter_sp_BX15" "diagnosis" "UC" "diagnosisUC" -0.62866655218304 0.145736848652295 1.60537249738602e-05 0.000105660018018152 0.00106117260879401 0.00290310433908414 "prevalence" 1527 621 +"Veillonella_rogosae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 1.08912549313206 0.26062197211773 2.92861500951217e-05 0.000179953261905245 0.0191940951272788 0.0358742733706308 "prevalence" 1527 207 +"GGB3267_SGB4317" "diagnosis" "CD" "diagnosisCD" -1.86082843018773 0.45287763933388 3.9755006852374e-05 0.000236833181065667 0.012373364402101 0.0245145831306166 "prevalence" 1527 54 +"GGB3175_SGB4191" "diagnosis" "CD" "diagnosisCD" -0.777624095998543 0.192134241360274 5.18127621406463e-05 0.000295166580824556 0.017823434164388 0.0336099044242746 "prevalence" 1527 154 +"Enterocloster_clostridioformis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.894030373014342 0.221372314744227 5.37751630283805e-05 0.000304570053789726 0.000419011050451501 0.00129758260784981 "prevalence" 1527 312 +"Bacteroides_faecis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.2884428493301 0.322859003740316 6.58704610571244e-05 0.000365655911663696 0.000155144233980664 0.000542491096303249 "prevalence" 1527 434 +"Flavonifractor_plautii" "diagnosis" "UC" "diagnosisUC" 0.751716198867609 0.188655717064909 6.75959572205663e-05 0.000371371391000437 0.00150522083077509 0.00394420148213026 "prevalence" 1527 1224 +"Bacteroides_salyersiae" "antibiotics" "Yes" "antibioticsYes" 0.981044658989478 0.246520324686176 6.90403002249263e-05 0.000377884444368364 0.00962891628652185 0.0200160149578092 "prevalence" 1527 150 +"Veillonella_parvula" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.851771555050459 0.214614882951484 7.22241680582557e-05 0.000393108703024601 3.94129173741931e-14 9.45910016980633e-13 "prevalence" 1527 547 +"Faecalibacterium_SGB15315" "antibiotics" "Yes" "antibioticsYes" -0.908542983323259 0.230199805450683 7.92164672038982e-05 0.00042759385888513 0.00328799654945644 0.00794536465955607 "prevalence" 1527 619 +"Flavonifractor_plautii" "diagnosis" "CD" "diagnosisCD" 0.691913164243267 0.176653830578652 8.97417351228017e-05 0.000476509104429225 3.93300248304751e-05 0.000166797213738882 "prevalence" 1527 1224 +"GGB33469_SGB15236" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.97258305460862 0.509566860641539 0.000108346394660754 0.000558598562446212 1.58027467334065e-06 9.11896204944115e-06 "prevalence" 1527 293 +"Roseburia_faecis" "antibiotics" "Yes" "antibioticsYes" -0.70597103981996 0.183124265159788 0.000115659907811994 0.000593174435340252 0.0293587105617614 0.0511597332561387 "prevalence" 1527 922 +"Phocaeicola_massiliensis" "diagnosis" "CD" "diagnosisCD" -0.582331287015035 0.15181078043898 0.000125104253834816 0.000634944706475924 0.0417438373092027 0.0698597340705516 "prevalence" 1527 396 +"Clostridium_sp_AF36_4" "antibiotics" "Yes" "antibioticsYes" -0.856780743001247 0.227403433279741 0.000164779343065523 0.000815136294557043 0.0329143215245631 0.0567006909134398 "prevalence" 1527 568 +"Veillonella_dispar" "diagnosis" "CD" "diagnosisCD" -0.524519549533238 0.142716069983108 0.000237601534558283 0.00111336546409325 0.00450797676874748 0.0103487466691246 "prevalence" 1527 526 +"GGB3278_SGB4328" "diagnosis" "UC" "diagnosisUC" -0.74896944480759 0.205745580947045 0.00027235240612305 0.00125218023897515 0.0519453969004346 0.0838751362796009 "prevalence" 1527 179 +"Dysgonomonas_mossii" "diagnosis" "UC" "diagnosisUC" -1.8510764371853 0.513307556297931 0.000310744640799194 0.0013997687888185 0.0256382901145954 0.0457331661503594 "prevalence" 1527 31 +"Bacteroides_intestinalis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.88947306036457 0.525189144689119 0.000321043436903198 0.00144211235795138 0.0198424460357782 0.0365415454119997 "prevalence" 1527 158 +"Bacteroides_fragilis" "antibiotics" "Yes" "antibioticsYes" -0.655038386242697 0.182727157170892 0.000337350239007348 0.00150155436678897 0.00876642029993047 0.018551783239933 "prevalence" 1527 787 +"Bifidobacterium_adolescentis" "antibiotics" "Yes" "antibioticsYes" -0.996544997174617 0.284563863359912 0.000461765319898035 0.00195724389388451 0.0166167887393276 0.0316168088445584 "prevalence" 1527 427 +"Lachnospira_eligens" "age" "age" "age" 0.202300827861787 0.0584928926123427 0.00054308338803271 0.00226265445675035 0.00526017003177948 0.0117436354197867 "prevalence" 1527 929 +"Eubacterium_siraeum" "diagnosis" "CD" "diagnosisCD" -0.456072232356309 0.135469228308886 0.000760978719776589 0.00305694691656456 0.00204289054436468 0.00513641051154549 "prevalence" 1527 565 +"Lachnospira_pectinoschiza" "antibiotics" "Yes" "antibioticsYes" -0.761525711185281 0.227061612998869 0.000797017422238533 0.00316539033141076 0.00493090673501873 0.0111449762909452 "prevalence" 1527 500 +"Ruminococcus_bicirculans" "antibiotics" "Yes" "antibioticsYes" -0.651473016179753 0.199678063158289 0.00110388648637762 0.00423770961568149 0.0379715666667281 0.0641567590401037 "prevalence" 1527 678 +"GGB3478_SGB14857" "antibiotics" "Yes" "antibioticsYes" 1.57952238344065 0.501094178452247 0.00162074798790352 0.00600937679006353 0.018629472191614 0.03506724177245 "prevalence" 1527 16 +"Parasutterella_SGB9260" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.80876693081001 0.574029751783076 0.00162713283197638 0.00602162415470046 0.0620401198527856 0.0972023242797353 "prevalence" 1527 269 +"Waltera_intestinalis" "age" "age" "age" 0.172009844556061 0.055903780753021 0.00209171714409793 0.00736435189111235 0.021397154172399 0.038957577251816 "prevalence" 1527 524 +"Bacteroides_ovatus" "age" "age" "age" -0.196077193687222 0.064740124745479 0.00245623791822357 0.00855523866703896 0.000372172570214824 0.00118377781369534 "prevalence" 1527 1176 +"Phocaeicola_massiliensis" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.02973932577627 0.34613275640338 0.00293004068314045 0.0100092648511476 0.000226877036655471 0.000765438181176284 "prevalence" 1527 396 +"Prevotella_copri_clade_A" "diagnosis" "CD" "diagnosisCD" -0.481440016899023 0.16416638033585 0.00336099134650526 0.0112647977548392 0.00145654100494086 0.00382613756521778 "prevalence" 1527 289 +"Bacteroides_intestinalis" "antibiotics" "Yes" "antibioticsYes" 0.720055105183537 0.250959473895445 0.00411500184073708 0.0134911301959736 0.000562491582260627 0.00165919304711515 "prevalence" 1527 158 +"Bacteroides_salyersiae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.49980584454297 0.525818800663564 0.00434007713111545 0.0140872270999993 0.0030264453727864 0.00743238677595916 "prevalence" 1527 150 +"Clostridium_sp_1001270H_150608_G6" "age" "age" "age" 0.231569626799474 0.0836319390563021 0.0056243520473306 0.0172527219787818 0.0567443671415023 0.0901083484231977 "prevalence" 1527 141 +"Dysosmobacter_welbionis" "diagnosis" "CD" "diagnosisCD" 0.492330497381026 0.179429233741754 0.00607195724134454 0.018451950932484 0.000331682160438551 0.00107440601663531 "prevalence" 1527 1191 +"Prevotella_copri_clade_B" "diagnosis" "UC" "diagnosisUC" -1.37459550956354 0.515131660825259 0.00762054535148315 0.0226804436172599 1.8899788862492e-05 8.71536115231072e-05 "prevalence" 1527 40 +"Paraprevotella_clara" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -1.53837212153206 0.576820540809446 0.00765349331323346 0.0227278509636142 0.000224811878954956 0.000760901744155235 "prevalence" 1527 178 +"Bacteroides_finegoldii" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" -2.52686240050506 0.976703542737266 0.00967781041968025 0.0276873229283385 0.0038273465136327 0.00900150984052591 "prevalence" 1527 333 +"Blautia_obeum" "diagnosis" "UC" "diagnosisUC" 0.386575787185545 0.151345280354751 0.010641256792017 0.0298321603609773 6.48189288021683e-07 4.00285314708127e-06 "prevalence" 1527 899 +"Bacteroides_caecigallinarum" "diagnosis" "UC" "diagnosisUC" -1.4211022581191 0.570968031368424 0.0128126425612534 0.0350152497408241 0.000843784533191672 0.00237609724546775 "prevalence" 1527 21 +"Dysosmobacter_welbionis" "diagnosis" "UC" "diagnosisUC" 0.477534787611012 0.191850205292246 0.0128066109174071 0.0350152497408241 1.93610018994761e-06 1.08341259466005e-05 "prevalence" 1527 1191 +"Akkermansia_muciniphila" "diagnosis" "CD" "diagnosisCD" -0.356783116015165 0.145262786171719 0.0140445492511786 0.0377483483312282 0.0458679939553992 0.0758006285084531 "prevalence" 1527 407 +"Oscillospiraceae_bacterium" "diagnosis" "UC" "diagnosisUC" -0.614610371403351 0.261985979545675 0.0189778053434756 0.048792936369936 4.60626162768207e-08 3.49943329412393e-07 "prevalence" 1527 81 +"Clostridium_symbiosum" "antibiotics" "Yes" "antibioticsYes" 0.424906123226616 0.182585197954282 0.0199564148297982 0.0505769579473745 0.0196940088930916 0.0364218448180468 "prevalence" 1527 539 +"Bacteroides_fragilis" "diagnosis" "UC" "diagnosisUC" 0.334039366266006 0.144447986608563 0.0207488507823511 0.0523943582036065 0.00032598546086593 0.00105920198976745 "prevalence" 1527 787 +"Gemmiger_formicilis" "age" "age" "age" -0.131584120352696 0.0601214824280632 0.0286232108331363 0.0687097714593959 0.0230780722727548 0.0416588791795369 "prevalence" 1527 472 +"Bacteroides_cellulosilyticus" "diagnosis" "UC" "diagnosisUC" -0.344425898728057 0.157668754793308 0.028926223795605 0.0693519525111806 1.94360644585334e-05 8.86375203283362e-05 "prevalence" 1527 433 +"Paraprevotella_clara" "age" "age" "age" -0.186840886697208 0.0865930556912654 0.0309520171060018 0.0737563919818629 0.0052955936479363 0.0117977782536302 "prevalence" 1527 178 +"GGB1543_SGB2126" "diagnosis" "CD" "diagnosisCD" -0.898095279550714 0.416999209159975 0.0312629378452218 0.074316034731829 0.00905833860173111 0.0190930250767027 "prevalence" 1527 42 +"Roseburia_sp_AF02_12" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.819596712909048 0.38200202047195 0.0319105126104206 0.075579565625166 0.0187762854908569 0.0352182749498683 "prevalence" 1527 363 +"Klebsiella_pneumoniae" "antibiotics" "Yes" "antibioticsYes" 0.559074051064181 0.263991497454985 0.0341943016674565 0.0799230448064712 0.000732769544661172 0.00209136388962756 "prevalence" 1527 119 +"Alistipes_dispar" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.745341812611071 0.361064909704908 0.0389904568687361 0.0886812156329233 0.0118912970621758 0.0237376364795041 "prevalence" 1527 83 +"Haemophilus_parainfluenzae" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.442078296231263 0.214199350555511 0.0390306271465272 0.0886812156329233 0.00067911347063454 0.00196477760271253 "prevalence" 1527 674 +"Ruminococcus_gnavus" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.720785733521657 0.351003127729456 0.0400238859579238 0.0903079366764239 0.0257866363646432 0.0459202158533949 "prevalence" 1527 767 +"Parabacteroides_merdae" "age" "age" "age" -0.110357519371958 0.0540250178419256 0.0410810164863889 0.091949949844678 0.00768769444386086 0.0165004173429209 "prevalence" 1527 826 +"Prevotella_copri_clade_B" "age" "age" "age" 0.282155352557018 0.139133521906057 0.0425656984654037 0.094305147923144 8.40281242364682e-06 4.22541424731954e-05 "prevalence" 1527 40 +"Veillonella_dispar" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.453082890492055 0.224142156197727 0.043237481342403 0.0955724417907867 0.000416383311675816 0.00129323757979312 "prevalence" 1527 526 +"GGB1543_SGB2126" "diagnosis" "UC" "diagnosisUC" -0.784142347767144 0.400106498732466 0.0500151876847464 0.10858852970666 4.11575254186669e-05 0.000171111601740599 "prevalence" 1527 42 +"Clostridium_sp_AF34_10BH" "age" "age" "age" 0.118414983150241 0.0614389433081205 0.0539347376051093 0.115367384966985 0.0212142309035439 0.0387581796438449 "prevalence" 1527 960 +"Alistipes_dispar" "antibiotics" "Yes" "antibioticsYes" 0.616100465398166 0.32262412292949 0.0561777699783346 0.119707047478371 1.02297900346215e-05 5.04797115727119e-05 "prevalence" 1527 83 +"Alistipes_SGB2313" "diagnosis" "UC" "diagnosisUC" -0.588067258993787 0.309688435753372 0.0575776727658544 0.121468922716429 0.00888937934731837 0.0187743691815364 "prevalence" 1527 73 +"Klebsiella_pneumoniae" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.999988230171527 0.531125400683792 0.0597312228028906 0.124921806255821 0.0100124884457238 0.0205704042775959 "prevalence" 1527 119 +"Blautia_faecis" "diagnosis" "UC" "diagnosisUC" 0.335994717519106 0.178787396563575 0.0602038751469141 0.125414042683444 0.00116503646162158 0.00317082088523812 "prevalence" 1527 1125 +"Candidatus_Cibionibacter_quicibialis" "age" "age" "age" 0.10771181995064 0.0573365701995528 0.0603007060782095 0.125481980486498 0.042684799917444 0.0712087657390535 "prevalence" 1527 933 +"Alistipes_SGB2313" "diagnosis" "CD" "diagnosisCD" -0.548141357818123 0.307265355085724 0.0744342613630853 0.146469835552335 0.00189421173938842 0.00481997011275704 "prevalence" 1527 73 +"Bacteroides_stercoris" "age" "age" "age" -0.0954267668563628 0.0540006692758795 0.0772047101604489 0.150777610307298 0.000181100854057759 0.000624975496356186 "prevalence" 1527 826 +"GGB51647_SGB4348" "age" "age" "age" -0.174024287656045 0.10043859100743 0.0831590245546228 0.159776532920092 0.0117699386649155 0.023539877329831 "prevalence" 1527 123 +"Clostridium_sp_AF20_17LB" "diagnosis" "CD" "diagnosisCD" 0.228973572910388 0.135278199528468 0.0905292481957596 0.171741894150014 0.000405299122524627 0.00127001742844512 "prevalence" 1527 654 +"Hungatella_hathewayi" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.36179392400832 0.216103418298634 0.094097135279365 0.176624209736676 0.000816192607498989 0.00230454383293832 "prevalence" 1527 451 +"Coprococcus_eutactus" "antibiotics" "Yes" "antibioticsYes" -0.664023234585573 0.402809977102306 0.0992546983683139 0.18435711084761 0.00488425262321102 0.0110681776182636 "prevalence" 1527 177 +"Phocaeicola_coprocola" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.775203672338969 0.474398465253222 0.102242660817563 0.188212584897142 0.00130381502800769 0.00350338083861609 "prevalence" 1527 101 +"Alistipes_dispar" "diagnosis" "CD" "diagnosisCD" -0.428596012382019 0.283394982425834 0.130441608024275 0.231394556514616 0.0208749649528575 0.0382707690802387 "prevalence" 1527 83 +"Phocaeicola_coprocola" "antibiotics" "Yes" "antibioticsYes" -0.596775382153804 0.401888841426365 0.137563300926432 0.24150825697237 0.000984888031361542 0.00273695200294155 "prevalence" 1527 101 +"Bacteroides_fragilis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.497746488970455 0.336302795821577 0.138858684831107 0.242475308453962 0.000635515979849899 0.00184877375956334 "prevalence" 1527 787 +"Prevotella_copri_clade_B" "antibiotics" "Yes" "antibioticsYes" -1.29250046026442 0.889021704195448 0.145989065622456 0.251228238956719 0.00244417061563196 0.00611621841257665 "prevalence" 1527 40 +"GGB1549_SGB2133" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" -0.950872005849095 0.742378505825675 0.200248015751173 0.320399692905732 0.00010206755539155 0.000371666684460263 "prevalence" 1527 46 +"Alistipes_finegoldii" "age" "age" "age" -0.0692550482275962 0.055422128773414 0.211448630362726 0.334551112330985 0.0214824898557557 0.0390456270011671 "prevalence" 1527 639 +"Clostridium_sp_1001270H_150608_G6" "antibiotics" "Yes" "antibioticsYes" -0.529351657720392 0.42752876257565 0.215654446375462 0.338064244030612 0.0607200178099112 0.0954171708441462 "prevalence" 1527 141 +"Alistipes_SGB2313" "antibiotics" "Yes" "antibioticsYes" -0.703237064629908 0.587836890069379 0.231574337235026 0.356296263745858 0.0514866995715115 0.0832728531412468 "prevalence" 1527 73 +"Bacteroides_ovatus" "diagnosis" "CD" "diagnosisCD" 0.182411364773338 0.164587689701776 0.267735349041867 0.398139172015075 0.00585817453534832 0.0129690404807711 "prevalence" 1527 1176 +"Bacteroides_xylanisolvens" "diagnosis" "UC" "diagnosisUC" -0.163927118695916 0.148961841893446 0.271130081742466 0.40135468160968 4.35630420625444e-11 6.13367632240625e-10 "prevalence" 1527 959 +"Roseburia_sp_AF02_12" "age" "age" "age" 0.066268834380898 0.062340674328542 0.287776876946444 0.421977536368283 0.0526047853624583 0.0848101577751999 "prevalence" 1527 363 +"Parasutterella_SGB9260" "diagnosis" "CD" "diagnosisCD" 0.190705701851698 0.186179094295056 0.305687370234788 0.441799646034597 1.95027717087015e-06 1.08394352233625e-05 "prevalence" 1527 269 +"Bacteroides_ovatus" "antibiotics" "Yes" "antibioticsYes" 0.226377956669745 0.226027984315072 0.316561773102192 0.454156905023262 0.0123693681767513 0.0245145831306166 "prevalence" 1527 1176 +"Prevotella_copri_clade_B" "diagnosis" "CD" "diagnosisCD" -0.342157819626312 0.350448369386056 0.328894507491217 0.46821244465263 0.000202211087677373 0.000691051484101314 "prevalence" 1527 40 +"Prevotella_copri_clade_A" "antibiotics" "Yes" "antibioticsYes" -0.242941998029728 0.258901807164551 0.348061621061261 0.489289501837198 0.0252085520541768 0.0450426919952804 "prevalence" 1527 289 +"Collinsella_aerofaciens" "diagnosis" "UC" "diagnosisUC" 0.132178999745467 0.143495287848261 0.356978247284633 0.49788400799013 6.70261348263423e-05 0.000257380357733155 "prevalence" 1527 698 +"Clostridium_symbiosum" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" 0.185052257344868 0.216443784476901 0.392569508382406 0.530851778117109 3.57871448031233e-08 2.79934999348875e-07 "prevalence" 1527 539 +"Blautia_obeum" "diagnosis" "CD" "diagnosisCD" 0.1050102575616 0.137454014724399 0.444887227947915 0.582647214081921 0.000131697345953863 0.000466685897071407 "prevalence" 1527 899 +"Eisenbergiella_massiliensis" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.260724964002631 0.347156925128224 0.452635123919738 0.590026038785303 0.0125468807317051 0.0248118090874168 "prevalence" 1527 417 +"Lachnospira_eligens" "diagnosis" "UC" "diagnosisUC" 0.113660281351293 0.158571448561519 0.473512039644996 0.608675739074658 0.0606691145449938 0.0954171708441462 "prevalence" 1527 929 +"Phocaeicola_sartorii" "diagnosis" "CD" "diagnosisCD" 0.109132846862868 0.156566685445052 0.485779342504655 0.618379697233938 0.000262506634050252 0.00087447004907592 "prevalence" 1527 424 +"GGB3277_SGB4327" "diagnosis" "UC" "diagnosisUC" 0.151790192979649 0.224986132578899 0.499888841125223 0.632221874148016 0.00836404579385697 0.0178432976935615 "prevalence" 1527 152 +"Lacrimispora_celerecrescens" "diagnosis" "UC" "diagnosisUC" 0.0907652516626782 0.146431601089476 0.535358238627919 0.664606098017125 2.00744029754674e-06 1.10987275089495e-05 "prevalence" 1527 756 +"Ruthenibacterium_lactatiformans" "diagnosis" "UC" "diagnosisUC" -0.0819419983904928 0.147157812937858 0.577643058094647 0.701936900197102 0.0625886449809885 0.0979164579258131 "prevalence" 1527 797 +"Blautia_faecis" "diagnosis" "CD" "diagnosisCD" 0.0798452598388132 0.16132286256071 0.620641939297072 0.740827336216541 0.0480940111075561 0.0788622293937565 "prevalence" 1527 1125 +"Enterocloster_clostridioformis" "diagnosis" "UC" "diagnosisUC" -0.0877013511507292 0.19817919401132 0.658101665356538 0.770941639152683 0.000360647680674564 0.0011575803975451 "prevalence" 1527 312 +"Parasutterella_excrementihominis" "diagnosis" "UC" "diagnosisUC" 0.0636473190303046 0.144616725776981 0.659857179919537 0.772287575113954 0.0175440511824156 0.0332612532291399 "prevalence" 1527 699 +"Phascolarctobacterium_succinatutens" "antibiotics" "Yes" "antibioticsYes" -0.135309451492391 0.379997909008936 0.721781056530033 0.817393937802238 0.0484818408556091 0.0793749208426717 "prevalence" 1527 125 +"Clostridium_symbiosum" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.11472438019231 0.3292620307497 0.727518163179979 0.820768181786189 0.0466693175480934 0.0767644849389201 "prevalence" 1527 539 +"Lacrimispora_celerecrescens" "antibiotics" "Yes" "antibioticsYes" 0.0499771903030998 0.190674235346398 0.793238390191174 0.868340512287705 0.00936265305073425 0.0195781418249017 "prevalence" 1527 756 +"Enterocloster_bolteae" "antibiotics" "Yes" "antibioticsYes" 0.0380670717541564 0.181019866979206 0.833439598179033 0.895851851162067 0.0514935351337444 0.0832728531412468 "prevalence" 1527 866 +"Alistipes_dispar" "dysbiosis_state" "dysbiosis_UC" "dysbiosis_statedysbiosis_UC" 0.167890169302746 1.01924506849087 0.869164280365128 0.924522048902265 0.000451293465955072 0.00137338876094685 "prevalence" 1527 83 +"Bacteroides_eggerthii" "age" "age" "age" 0.00796292125943403 0.0611986417485567 0.896474667212129 0.942286982104626 0.0165427155959326 0.031589706454439 "prevalence" 1527 409 +"Prevotella_sp_885" "antibiotics" "Yes" "antibioticsYes" -0.0491046443009148 0.396177068314512 0.90135786833446 0.945893273214573 0.0047738299990927 0.010888044231192 "prevalence" 1527 69 +"Parabacteroides_distasonis" "diagnosis" "CD" "diagnosisCD" 0.0152991075689498 0.160790779684753 0.924196351400039 0.959406343880494 0.00926305806161909 0.0194468972426834 "prevalence" 1527 1140 +"Akkermansia_sp_KLE1798" "age" "age" "age" NA NA NA NA 0.00510186237066213 0.0114873489625143 "abundance" 1527 70 +"Akkermansia_sp_KLE1798" "diagnosis" "CD" "diagnosisCD" NA NA NA NA 9.85065586242768e-08 7.02857607481326e-07 "abundance" 1527 70 +"Akkermansia_sp_KLE1798" "diagnosis" "UC" "diagnosisUC" NA NA NA NA 2.62169464152527e-06 1.40533479261456e-05 "abundance" 1527 70 +"Akkermansia_sp_KLE1798" "reads" "reads" "reads" NA NA NA NA 0.00104502944414029 0.0028813344465069 "abundance" 1527 70 +"Bacteroides_ilei" "antibiotics" "Yes" "antibioticsYes" NA NA NA NA 0.0330726644962939 0.0567881848911973 "abundance" 1527 17 +"Bacteroides_ilei" "diagnosis" "CD" "diagnosisCD" NA NA NA NA 0.0579054688102789 0.0918140766721539 "abundance" 1527 17 +"Bacteroides_ilei" "diagnosis" "UC" "diagnosisUC" NA NA NA NA 0.0505190119477977 0.0824545233645662 "abundance" 1527 17 +"Bacteroides_mediterraneensis" "diagnosis" "CD" "diagnosisCD" NA NA NA NA 0.0564435556261275 0.0897656547307088 "abundance" 1527 13 +NA NA NA NA NA NA NA NA NA NA NA NA NA +"Butyrivibrio_crossotus" "antibiotics" "Yes" "antibioticsYes" NA NA NA NA 0.0597757875379695 0.0943546063379608 "abundance" 1527 43 +"Butyrivibrio_crossotus" "diagnosis" "CD" "diagnosisCD" NA NA NA NA 0.000277519368780909 0.000921573752932829 "abundance" 1527 43 +"Dysgonomonas_mossii" "diagnosis" "CD" "diagnosisCD" NA NA NA NA 7.6418109194266e-05 0.000291278147533227 "abundance" 1527 31 +"GGB1680_SGB2312" "age" "age" "age" NA NA NA NA 1.39954203422138e-05 6.6846344719656e-05 "abundance" 1527 12 +"GGB1680_SGB2312" "diagnosis" "CD" "diagnosisCD" NA NA NA NA 0.0158643871462543 0.0304596233208082 "abundance" 1527 12 +"GGB1680_SGB2312" "diagnosis" "UC" "diagnosisUC" NA NA NA NA 0.00992861344566472 0.0205178391362465 "abundance" 1527 12 +"GGB33512_SGB15201" "age" "age" "age" NA NA NA NA 1.08308942443545e-08 9.1499394576307e-08 "abundance" 1527 121 +"GGB33512_SGB15201" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" NA NA NA NA 0.0512132648996266 0.0831719188500391 "abundance" 1527 121 +"GGB4237_SGB5728" "reads" "reads" "reads" NA NA NA NA 0.0228237057948682 0.0412702625331863 "abundance" 1527 6 +"GGB6601_SGB9333" "age" "age" "age" NA NA NA NA 5.66836058358365e-07 3.52105222133196e-06 "abundance" 1527 69 +"GGB781_SGB1024" "age" "age" "age" NA NA NA NA 0.0015220120549902 0.00397160195651991 "abundance" 1527 18 +"GGB781_SGB1024" "diagnosis" "CD" "diagnosisCD" NA NA NA NA 0.0110881448490098 0.0223030113534369 "abundance" 1527 18 +"GGB781_SGB1024" "reads" "reads" "reads" NA NA NA NA 0.0601732762138578 0.0948402681818415 "abundance" 1527 18 +"GGB9342_SGB14306" "age" "age" "age" NA NA NA NA 4.86783503243169e-17 1.77256337732685e-15 "abundance" 1527 92 +"GGB9342_SGB14306" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" NA NA NA NA 0.0539627149345089 0.0867345920408544 "abundance" 1527 92 +"Lactobacillus_acidophilus" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" NA NA NA NA 2.15601054132398e-07 1.44097919723932e-06 "abundance" 1527 26 +"Prevotella_copri_clade_C" "diagnosis" "CD" "diagnosisCD" NA NA NA NA 0.0329974443323584 0.0567513049103754 "abundance" 1527 16 +"Prevotella_copri_clade_E" "age" "age" "age" NA NA NA NA 6.0312330895609e-05 0.000235017791238978 "abundance" 1527 38 +"Prevotella_copri_clade_E" "diagnosis" "CD" "diagnosisCD" NA NA NA NA 0.032902429387931 0.0567006909134398 "abundance" 1527 38 +"Prevotella_copri_clade_E" "diagnosis" "UC" "diagnosisUC" NA NA NA NA 0.000375504583335791 0.00118722407186406 "abundance" 1527 38 +"Prevotella_marseillensis" "antibiotics" "Yes" "antibioticsYes" NA NA NA NA 0.00321101570158716 0.00781297829694941 "abundance" 1527 18 +"Prevotella_marseillensis" "diagnosis" "UC" "diagnosisUC" NA NA NA NA 0.00665638965194315 0.0145832935113111 "abundance" 1527 18 +"Prevotella_SGB48271" "diagnosis" "UC" "diagnosisUC" NA NA NA NA 0.0422157720116998 0.0705377456398022 "abundance" 1527 6 +"Prevotella_stercorea" "age" "age" "age" NA NA NA NA 3.25627312505182e-05 0.000139781480490029 "abundance" 1527 40 +"Prevotella_stercorea" "diagnosis" "CD" "diagnosisCD" NA NA NA NA 0.0250075092074925 0.0448351947760816 "abundance" 1527 40 +"Prevotella_stercorea" "diagnosis" "UC" "diagnosisUC" NA NA NA NA 0.000306057157865497 0.00100651982800861 "abundance" 1527 40 +"Rikenellaceae_bacterium" "age" "age" "age" NA NA NA NA 0.0193402378230692 0.0360835532529348 "abundance" 1527 67 +"Rikenellaceae_bacterium" "diagnosis" "CD" "diagnosisCD" NA NA NA NA 0.000233894668321226 0.000786601177538901 "abundance" 1527 67 +"Rikenellaceae_bacterium" "diagnosis" "UC" "diagnosisUC" NA NA NA NA 0.0148571594053397 0.0288934812744727 "abundance" 1527 67 +"Rikenellaceae_bacterium" "reads" "reads" "reads" NA NA NA NA 0.00105224598932845 0.00289367647065324 "abundance" 1527 67 +"Ruminococcus_sp_BSD2780120874_150323_B10" "antibiotics" "Yes" "antibioticsYes" NA NA NA NA 0.0162699492625055 0.0311251203282714 "abundance" 1527 90 +"Ruminococcus_sp_BSD2780120874_150323_B10" "diagnosis" "UC" "diagnosisUC" NA NA NA NA 4.79716243777565e-05 0.000195017943795125 "abundance" 1527 90 +"Ruminococcus_sp_BSD2780120874_150323_B10" "dysbiosis_state" "dysbiosis_CD" "dysbiosis_statedysbiosis_CD" NA NA NA NA 0.060895011036209 0.095549972740322 "abundance" 1527 90 +"Ruminococcus_sp_BSD2780120874_150323_B10" "reads" "reads" "reads" NA NA NA NA 0.0459408619026663 0.0758024221393994 "abundance" 1527 90 +NA NA NA NA NA NA NA NA NA NA NA NA NA +"GGB1549_SGB2133" "age" "age" "age" 1.29530484518543 0.149572322251031 4.71528175218606e-18 NA 0.000101757565140748 0.000371666684460263 "prevalence" 1527 46 diff --git a/tests/testthat/test_maaslin_write_results.R b/tests/testthat/test_maaslin_write_results.R index 18c15b1..9509253 100644 --- a/tests/testthat/test_maaslin_write_results.R +++ b/tests/testthat/test_maaslin_write_results.R @@ -51,7 +51,8 @@ expect_equal(results_combined, all_results) signif_results <- read.csv(file.path(output_tmp, 'significant_results.tsv'), sep = '\t') rownames(signif_results) <- NULL -results_combined <- results_combined[results_combined$qval_joint < 0.1,] +results_combined <- results_combined[results_combined$qval_joint < 0.1 | + results_combined$qval_individual < 0.1,] rownames(results_combined) <- NULL results_combined$error <- NULL