From e4ff7811f61caf55ada19686831c257622594ae6 Mon Sep 17 00:00:00 2001 From: Francesco Beghini Date: Mon, 6 Jul 2020 13:39:11 +0200 Subject: [PATCH] Update README.md --- README.md | 10 +++------- 1 file changed, 3 insertions(+), 7 deletions(-) diff --git a/README.md b/README.md index b83390c..942ac80 100755 --- a/README.md +++ b/README.md @@ -23,11 +23,7 @@ MetaPhlAn relies on ~1.1M unique clade-specific marker genes (the latest marker * orders of magnitude speedups compared to existing methods. * metagenomic strain-level population genomics -If you use MetaPhlAn version 1, please cite: - -[**Metagenomic microbial community profiling using unique clade-specific marker genes.**](https://www.nature.com/articles/nmeth.2066) *Nicola Segata, Levi Waldron, Annalisa Ballarini, Vagheesh Narasimhan, Olivier Jousson, & Curtis Huttenhower*. Nature Methods 9, 811-814 (2012) - -If you use MetaPhlAn2, please cite: +If you use MetaPhlAn, please cite: [**MetaPhlAn2 for enhanced metagenomic taxonomic profiling.**](http://www.nature.com/nmeth/journal/v12/n10/pdf/nmeth.3589.pdf) *Duy Tin Truong, Eric A Franzosa, Timothy L Tickle, Matthias Scholz, George Weingart, Edoardo Pasolli, Adrian Tett, Curtis Huttenhower & Nicola Segata*. Nature Methods 12, 902-903 (2015) @@ -38,7 +34,7 @@ If you use StrainPhlAn, please cite the MetaPhlAn2 paper and the following Strai ------------- ## Installation -The best way to install MetaPhlAn is through conda via the Bioconda channel. If you have not configured you Anaconda installation in order to fetch packages from Bioconda, please follow [these steps](https://bioconda.github.io/user/install.html#set-up-channels) in order to setup the channels. +The best way to install MetaPhlAn is through conda via the Bioconda channel. If you have not configured you Anaconda installation in order to fetch packages from Bioconda, **please follow [these steps](https://bioconda.github.io/user/install.html#set-up-channels) in order to setup the channels.** You can install MetaPhlAn by running @@ -50,7 +46,7 @@ For installing it from the source code and for further installation instructions ------------- -## MetaPhlAn2 and StrainPhlAn tutorials and resources +## MetaPhlAn and StrainPhlAn tutorials and resources In addition to the information on this page, you can refer to the following additional resources.