File "Save session" and "save session as" are not integrated with mda_save

[bieniekmateusz]

No description provided.

[shozebhaider]

How do we save sessions in this build then Mat ?

[bieniekmateusz]

Hi @shozebhaider . Calling mda_save also calls underneath the PyMOL's save therefore both .pse and .mse files will be generated. Thanks

[shozebhaider]

My issue has been that even though I save, I cannot load a session back into the pymol build. I keep getting the error message:
module 'pymol.cmd' has no attribute 'set_session'.

[bieniekmateusz]

Hi @shozebhaider, thanks for letting me know. I've submitted a fix for that. The only limitation unfortunately is that when saving and loading the trajectory, you will need to be in the same directory.

After "git pull" you will be able to update the version with "pip install .". It is just one line in the api.py file. Best, Mat

[shozebhaider]

Sorry @bieniekmateusz to get back to this. Now save_sessions works good like you have mentioned. But the build is unable to export molecule to save as a pdb or a mol2 or any format? Can this be looked into if you have time.

[bieniekmateusz]

Thanks @shozebhaider . It's corrected now. The last time I was syncing the latest PyMOL code with our changes I must have missed that git replaced "save" with "mda_save" rather than keeping them together. Thanks for letting me know!