From 6881c9cb71fed83348ef391d91c98d05562a3044 Mon Sep 17 00:00:00 2001 From: Cyril Pernet Date: Wed, 31 Jan 2024 17:12:04 +0100 Subject: [PATCH] add ref to template and lnter --- src/schema/objects/entities.yaml | 17 ++++++++++++----- 1 file changed, 12 insertions(+), 5 deletions(-) diff --git a/src/schema/objects/entities.yaml b/src/schema/objects/entities.yaml index 29ea8f43e3..b6463e710a 100644 --- a/src/schema/objects/entities.yaml +++ b/src/schema/objects/entities.yaml @@ -29,11 +29,18 @@ atlas: name: atlas display_name: Atlas description: | - The definition of atlas per Merriam-Webster is ‘a bound collection of maps (i.e. labeled brain regions or quantitative aspects) and metadata (tables, or textual matter). - - Within BIDS atlases are broadly defined as a mapping between locations in a spatial coordinate systems and descriptions associated with those locations. By analogy with geographical atlases, brain atlases can map brain locations to either discrete labels like a map of countries does, or to continuous quantities like a topographic map does. - - This comprises all possible types of atlases, specifically deterministic, probabilistic, and mask/voxel-based ones, and quantitative maps from various modalities including but not limited to: structural features (e.g. myelination, cytoarchitecture), functional features (e.g. resting-state networks, localizers) and such based on multimodal data integration (e.g. gene expression, receptors). Furthermore, it covers both volume/voxel and surface/vertex data, as well as gray and white matter atlases. + The definition of atlas per Merriam-Webster is ‘a bound collection of maps (i.e. labeled brain regions + or quantitative aspects) and metadata (tables, or textual matter). Within BIDS, atlases are broadly + defined as a mapping between locations in a spatial coordinate systems and descriptions associated with + those locations. Atlases are often build from registering many subjects or maps to a template. By analogy + with geographical atlases, brain atlases can map brain locations to either discrete labels like a map + of countries does, or to continuous quantities like a topographic map does. + + This comprises all possible types of atlases, specifically deterministic, probabilistic, and mask/voxel-based + ones, and quantitative maps from various modalities including but not limited to structural features (e.g. + myelination, cytoarchitecture), functional features (e.g. resting-state networks, localizers) and such based on + multimodal data integration (e.g. gene expression, receptors). Furthermore, it covers both volume/voxel and + surface/vertex data, as well as gray and white matter atlases. ceagent: name: ce display_name: Contrast Enhancing Agent