diff --git a/Dockerfile b/Dockerfile index 839a486..5628beb 100644 --- a/Dockerfile +++ b/Dockerfile @@ -1,10 +1,10 @@ # Generated by Neurodocker version 0.4.2-3-gf7055a1 # Timestamp: 2020-06-04 13:51:08 UTC -# +# # Thank you for using Neurodocker. If you discover any issues # or ways to improve this software, please submit an issue or # pull request on our GitHub repository: -# +# # https://github.com/kaczmarj/neurodocker FROM ubuntu:xenial @@ -51,7 +51,6 @@ RUN apt-get update -qq \ python3 \ python3-pip \ python3-pandas \ - python2.7 \ python-pip \ libsm-dev \ libx11-dev \ diff --git a/Singularity b/Singularity index 1988c3f..da2a049 100644 --- a/Singularity +++ b/Singularity @@ -1,10 +1,10 @@ # Generated by Neurodocker version 0.4.2-3-gf7055a1 # Timestamp: 2020-06-04 13:51:09 UTC -# +# # Thank you for using Neurodocker. If you discover any issues # or ways to improve this software, please submit an issue or # pull request on our GitHub repository: -# +# # https://github.com/kaczmarj/neurodocker Bootstrap: docker @@ -46,7 +46,6 @@ apt-get install -y -q --no-install-recommends \ python3 \ python3-pip \ python3-pandas \ - python2.7 \ python-pip \ libsm-dev \ libx11-dev \ diff --git a/generate_freesurfer_images.sh b/generate_freesurfer_images.sh index b6e34f1..8443c8b 100644 --- a/generate_freesurfer_images.sh +++ b/generate_freesurfer_images.sh @@ -46,7 +46,7 @@ docker run --rm ${image} generate docker \ --base ubuntu:xenial \ --pkg-manager apt \ --install tcsh bc tar libgomp1 perl-modules wget curl \ - python3 python3-pip python3-pandas python2.7 python-pip \ + python3 python3-pip python3-pandas python-pip \ libsm-dev libx11-dev libxt-dev libxext-dev libglu1-mesa \ --freesurfer version=6.0.1 install_path=/opt/freesurfer \ --run-bash 'pip3 install nibabel pandas==0.21.0' \ @@ -80,7 +80,7 @@ docker run --rm ${image} generate singularity \ --base ubuntu:xenial \ --pkg-manager apt \ --install tcsh bc tar libgomp1 perl-modules wget curl \ - python3 python3-pip python3-pandas python2.7 python-pip \ + python3 python3-pip python3-pandas python-pip \ libsm-dev libx11-dev libxt-dev libxext-dev libglu1-mesa \ --freesurfer version=6.0.1 install_path=/opt/freesurfer \ --run-bash 'pip3 install nibabel pandas==0.21.0' \