From 73e415cd412b3773098df948a9111314cfa60304 Mon Sep 17 00:00:00 2001 From: David Lougheed Date: Mon, 15 Jul 2024 13:47:32 -0400 Subject: [PATCH 1/2] chore: update dependencies + base image; bump to 0.17.1 --- Dockerfile | 2 +- dev.Dockerfile | 2 +- poetry.lock | 893 +++++++++++++++++++++++++------------------------ pyproject.toml | 4 +- 4 files changed, 457 insertions(+), 444 deletions(-) diff --git a/Dockerfile b/Dockerfile index 4a94b52..42730b1 100644 --- a/Dockerfile +++ b/Dockerfile @@ -1,4 +1,4 @@ -FROM ghcr.io/bento-platform/bento_base_image:python-debian-2024.06.01 +FROM ghcr.io/bento-platform/bento_base_image:python-debian-2024.07.09 RUN apt-get update -y && \ apt-get install gcc libffi-dev -y && \ diff --git a/dev.Dockerfile b/dev.Dockerfile index 107f687..3e02c75 100644 --- a/dev.Dockerfile +++ b/dev.Dockerfile @@ -1,4 +1,4 @@ -FROM ghcr.io/bento-platform/bento_base_image:python-debian-2024.06.01 +FROM ghcr.io/bento-platform/bento_base_image:python-debian-2024.07.09 LABEL org.opencontainers.image.description="Local development image for Bento DRS." 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"typing_extensions-4.12.2-py3-none-any.whl", hash = "sha256:04e5ca0351e0f3f85c6853954072df659d0d13fac324d0072316b67d7794700d"}, + {file = "typing_extensions-4.12.2.tar.gz", hash = "sha256:1a7ead55c7e559dd4dee8856e3a88b41225abfe1ce8df57b7c13915fe121ffb8"}, ] [[package]] @@ -2220,13 +2233,13 @@ zstd = ["zstandard (>=0.18.0)"] [[package]] name = "virtualenv" -version = "20.26.2" +version = "20.26.3" description = "Virtual Python Environment builder" optional = false python-versions = ">=3.7" files = [ - {file = "virtualenv-20.26.2-py3-none-any.whl", hash = "sha256:a624db5e94f01ad993d476b9ee5346fdf7b9de43ccaee0e0197012dc838a0e9b"}, - {file = "virtualenv-20.26.2.tar.gz", hash = "sha256:82bf0f4eebbb78d36ddaee0283d43fe5736b53880b8a8cdcd37390a07ac3741c"}, + {file = "virtualenv-20.26.3-py3-none-any.whl", hash = "sha256:8cc4a31139e796e9a7de2cd5cf2489de1217193116a8fd42328f1bd65f434589"}, + {file = "virtualenv-20.26.3.tar.gz", hash = "sha256:4c43a2a236279d9ea36a0d76f98d84bd6ca94ac4e0f4a3b9d46d05e10fea542a"}, ] [package.dependencies] diff --git a/pyproject.toml b/pyproject.toml index 1700336..63585a0 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [tool.poetry] name = "chord-drs" -version = "0.17.0" +version = "0.17.1" description = "An implementation of a data repository system (as per GA4GH's specs) for the Bento platform." authors = ["David Lougheed "] license = "LGPL-3.0" @@ -36,7 +36,7 @@ tox = "^4.12.1" debugpy = "^1.8.1" pytest-lazy-fixture = "^0.6.3" sqlalchemy-stubs = "^0.4" -mypy = "^1.7.1" +mypy = "~1.10.1" types-flask-cors = "^4.0.0.2" types-flask-migrate = "^4.0.0.7" black = "^24.4.0" From 8293dc0720f1a00b016114963a118b5e2b1b2552 Mon Sep 17 00:00:00 2001 From: David Lougheed Date: Mon, 15 Jul 2024 13:52:21 -0400 Subject: [PATCH 2/2] fix: re-lock --- poetry.lock | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/poetry.lock b/poetry.lock index f5c4139..0895ffe 100644 --- a/poetry.lock +++ b/poetry.lock @@ -2385,4 +2385,4 @@ multidict = ">=4.0" [metadata] lock-version = "2.0" python-versions = "^3.10" -content-hash = "1f3e30cb4d3ce99c51d3820f484a95a2b8c6ef28bea01677246c9c5b46beb559" +content-hash = "de58ca69ec93240f7a8d845248ce29bbe2784b1a07ad78cefcb78be79bb7f055"