diff --git a/examples/clinica_pipelines/adni-to-bids.jsonld b/examples/clinica_pipelines/adni-to-bids.jsonld new file mode 100644 index 000000000..815aeaa0e --- /dev/null +++ b/examples/clinica_pipelines/adni-to-bids.jsonld @@ -0,0 +1,39 @@ +{ + "@context": "https://raw.githubusercontent.com/omar-rifai/Provenance/main/context.json", + "records": { + "prov:Agent": [ + { + "@id": "RRID:Clinica", + "@type": "prov:SoftwareAgent", + "label": "Clinica" + } + ], + "prov:Activity": [ + { + "@id": "uuid:38133b39-f2fe-4746-aa3c-e3eca1b8abb4", + "label": "adni-to-bids", + "command": "clinica convert adni-to-bids src clinical_data bids ", + "parameters": { + "src": "/path/adni_dir", + "clinical_data": "/path/clinical/data/", + "bids": "/path/to/bids" + }, + "wasAssociatedWith": "RRID:Clinica", + "used": "uuid:0c18a16e-11e9-42cf-b004-019bc6aaa76b" + } + ], + "prov:Entity": [ + { + "@id": "uuid:0c18a16e-11e9-42cf-b004-019bc6aaa76b", + "label": "Dicom 022_S_0004", + "prov:atLocation": "/path/to/adni/data/raw/" + }, + { + "@id": "uuid:6cada670-8bf2-44ef-80ae-71796eb5ecd7", + "label": "sub-ADNI022S0004_ses-M00_T1w.nii.gz", + "atLocation": "/path/to/bids/sub-ADNI022S0004/ses-M00/anat/sub-ADNI022S0004_ses-M00_T1w.nii.gz", + "wasGeneratedBy": "uuid:38133b39-f2fe-4746-aa3c-e3eca1b8abb4" + } + ] + } +} \ No newline at end of file