This repository is part of the platform for oncogenomic reporting and interpretation.
Python adapter package for querying the GraphKB API. See the user manual
clone this repository
git clone https://github.com/bcgsc/pori_graphkb_python
cd pori_graphkb_pythoncreate a virtual environment
python3 -m venv venv
source venv/bin/activateinstall the package and its development dependencies
pip install -U pip setuptools
pip install -e .[dev]pytest testsUser documentation for this repository is hosted in the central PORI repository
Install the deployment dependencies
pip install .[deploy]Build the distribution files
python setup.py install sdist bdist_wheelUpload the distibutions to the package server (-r is defined in your pypirc)
twine upload -r bcgsc dist/*