Releases: axondeepseg/model_seg_generalist
Releases · axondeepseg/model_seg_generalist
Lighter generalist models
This release contains the light version of the generalist models trained with the nnunet fold_all
option, using the whole training set. We include 2 models:
model_seg_generalist
trained on the full data aggregation (TEM + SEM + BF + CARS)model_seg_genralist_bf
trained on the single modality aggregation of 3 different BF datasets
These models are lighter and faster than the ensemble version. For more information, see #21.
What's Changed
- OOD Experiment Support by @ArthurBoschet in #20
- Image Utilities Addition by @ArthurBoschet in #19
- Added "fold_all" Support by @ArthurBoschet in #17
- Ensembling Experiment Support Added by @ArthurBoschet in #18
Full Changelog: r20240224...r20240416
Initial release of the Multi-Domain segmentation model
This release contains the generalist model checkpoints (trained on 2024-02-06). Only the best checkpoints are included. Better performance can be achieved by ensembling the 5 folds.