compdump.txt

/usr/local/share/rtxi/libtool --mode=compile g++  -I. -I/usr/local/include/rtxi -I/usr/local/include/rtxi/plugins -I/usr/local/include/rtxi/libs -pipe -I/usr/local/include -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtPrintSupport -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/X11R6/include -I/usr/include/hdf5/serial -I/usr/include/qwt -I/usr/local/include/qwt -DQT_XML_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_WIDGETS_LIB -DQT_SVG_LIB -DQT_SHARED -w -O3 -std=c++11 -fPIC -c hmm_decoder.cpp -o hmm_decoder.lo
libtool: compile:  g++ -I. -I/usr/local/include/rtxi -I/usr/local/include/rtxi/plugins -I/usr/local/include/rtxi/libs -pipe -I/usr/local/include -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtPrintSupport -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/X11R6/include -I/usr/include/hdf5/serial -I/usr/include/qwt -I/usr/local/include/qwt -DQT_XML_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_WIDGETS_LIB -DQT_SVG_LIB -DQT_SHARED -w -O3 -std=c++11 -fPIC -c hmm_decoder.cpp  -fPIC -DPIC -o .libs/hmm_decoder.o
libtool: compile:  g++ -I. -I/usr/local/include/rtxi -I/usr/local/include/rtxi/plugins -I/usr/local/include/rtxi/libs -pipe -I/usr/local/include -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtPrintSupport -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/X11R6/include -I/usr/include/hdf5/serial -I/usr/include/qwt -I/usr/local/include/qwt -DQT_XML_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_WIDGETS_LIB -DQT_SVG_LIB -DQT_SHARED -w -O3 -std=c++11 -fPIC -c hmm_decoder.cpp -o hmm_decoder.o >/dev/null 2>&1
/usr/local/share/rtxi/libtool --mode=link g++  -I. -I/usr/local/include/rtxi -I/usr/local/include/rtxi/plugins -I/usr/local/include/rtxi/libs -pipe -I/usr/local/include -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtPrintSupport -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/X11R6/include -I/usr/include/hdf5/serial -I/usr/include/qwt -I/usr/local/include/qwt -DQT_XML_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_WIDGETS_LIB -DQT_SVG_LIB -DQT_SHARED -w -O3 -std=c++11 -fPIC   -L/usr/local/lib/rtxi/libs -L/usr/local/lib -lQt5OpenGL -lQt5PrintSupport -lQt5Xml -lQt5Svg -lQt5Widgets -lQt5Gui -lQt5Network -lQt5Core -lgit2 -lqwt-qt5 -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -lGL -lpthread -lgsl -lgslcblas -lm -ldl -Wl,--no-as-needed -Wl,@/usr/xenomai/lib/modechk.wrappers -lalchemy -lcopperplate /usr/xenomai/lib/xenomai/bootstrap-pic.o -L/usr/xenomai/lib -lcobalt -lmodechk -lpthread -lrt -module -avoid-version -rpath `readlink -f /usr/local/lib/rtxi` -o hmm_decoder.la hmm_decoder.lo moc_hmm_decoder.lo ../../../module_help/StAC_rtxi/hmmFuns.lo ../../../module_help/StAC_rtxi/hmm_tests/hmm_vec.lo 

*** Warning: Linking the shared library hmm_decoder.la against the non-libtool
*** objects  /usr/xenomai/lib/xenomai/bootstrap-pic.o is not portable!
libtool: link: rm -fr  .libs/hmm_decoder.a .libs/hmm_decoder.la .libs/hmm_decoder.lai .libs/hmm_decoder.so
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/5/crtbeginS.o  .libs/hmm_decoder.o .libs/moc_hmm_decoder.o ../../../module_help/StAC_rtxi/.libs/hmmFuns.o ../../../module_help/StAC_rtxi/hmm_tests/.libs/hmm_vec.o  /usr/xenomai/lib/xenomai/bootstrap-pic.o   -Wl,-rpath -Wl,/usr/xenomai/lib -Wl,-rpath -Wl,/usr/xenomai/lib -L/usr/local/lib/rtxi/libs -L/usr/local/lib -lQt5OpenGL -lQt5PrintSupport -lQt5Xml -lQt5Svg -lQt5Widgets -lQt5Gui -lQt5Network -lQt5Core -lgit2 -lqwt-qt5 -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -lGL -lgsl -lgslcblas -ldl /usr/xenomai/lib/libalchemy.so /usr/xenomai/lib/libcopperplate.so -L/usr/xenomai/lib /usr/xenomai/lib/libcobalt.so /usr/xenomai/lib/libmodechk.so -lpthread -lrt -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/5/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crtn.o  -O3 -Wl,--no-as-needed -Wl,@/usr/xenomai/lib/modechk.wrappers   -Wl,-soname -Wl,hmm_decoder.so -o .libs/hmm_decoder.so
libtool: link: ar cr .libs/hmm_decoder.a  hmm_decoder.o moc_hmm_decoder.o ../../../module_help/StAC_rtxi/hmmFuns.o ../../../module_help/StAC_rtxi/hmm_tests/hmm_vec.o
libtool: link: ranlib .libs/hmm_decoder.a
libtool: link: ( cd ".libs" && rm -f "hmm_decoder.la" && ln -s "../hmm_decoder.la" "hmm_decoder.la" )