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Casland

Cas9 landscapes for binding and scission of off-target sequences

List the ddGs of binding and scission for all off-target types characterized by Boyle, Becker, Bai, et al. 2021 in Science Advances.

To run, simply enter the perfect target sequence along with the path to the reference table and a request for either binding or scission parameters.

python list_ddG_perturbations.py --ddG_table S17_F7C_ddG_perturbation.tsv <target sequence> {binding,scission}

F7A_Cas9_model