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Total k-mer vs significant k-mer by groups #26

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dovivi opened this issue Mar 9, 2021 · 0 comments
Open

Total k-mer vs significant k-mer by groups #26

dovivi opened this issue Mar 9, 2021 · 0 comments

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@dovivi
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dovivi commented Mar 9, 2021

Hi,
how can I get which is the % of total k-mers that are significant (in case and control separately)? If I count lines in case_out_wo_bonf.kmerDiff and case_out_w_bonf.kmerDiff I get different numbers and the file total_kmers.txt I guess contains the total sum but not separated by group.

Thanks
@dovivi dovivi changed the title Total k-mer vs significant k-mer Total k-mer vs significant k-mer by groups Mar 9, 2021
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