sankey and chord plot error #133
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Hi there, have you been able to solve this issue? I ran into the same issue as this one. |
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No I didn’t. I ended up exporting the data from samap and making the plot in R with ggalluvial, which I find easier to use.On Dec 6, 2023, at 11:52 AM, amdqiao1 ***@***.***> wrote:
Hi there, have you been able to solve this issue? I ran into the same issue as this one.
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I ran into the same issue as this one in vscode. |
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@dsb66 Hey! I ran into the same issue as well and I am giving up on using sankey_plot from SAMap as well. But I am curious how do you plot the sankey plot using ggalluvial? Did you export the MappingTable to R and modify the table manually for ggalluvial? |
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Yes, that is what I did. Here is my code for reference.
…On Sun, Apr 14, 2024 at 11:45 PM danielylup ***@***.***> wrote:
@dsb66 <https://github.com/dsb66> Hey! I ran into the same issue as well
and I am giving up on using sankey_plot from SAMap as well. But I am
curious how do you plot the sankey plot using ggalluvial? Did you export
the MappingTable to R and modify the table manually for ggalluvial?
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@dsb66 Thank you very much for your reply! However I couldn't find the code that you mentioned. |
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The code is the Rmd attached to my last email.On Apr 15, 2024, at 11:12 PM, danielylup ***@***.***> wrote:
@dsb66 Thank you very much for your reply! However I couldn't find the code that you mentioned.
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Installing holoviews separately fixed the issue for me: |
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How to use ggalluvial to plot a Sankey diagram of the MappingTable? |
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micromamba install holoviews==1.18.3 -c conda-forge fixed the issue for me :) |
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Any other solution? I am still getting the same error even after reinstalling holoviews. |
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I'm also having the same issue, I tried with different approaches, but so far no results. I tried also plotting in R with ggalluvial but not getting the best results. Do you know any other alternatives or strategies that we can use ? |
I am trying to make a sankey plot and a chord plot using the commands shown in the SAMap tutorial. Both commands fail with the following error message:
However,
holoviews-samapis already installed - see the output ofconda listbelow. Any suggestions? Thank you.The text was updated successfully, but these errors were encountered: