DESCRIPTION

Package: DualSimplex
Type: Package
Title: Projective dual simplex based gene expression deconvolution
Version: 1.0
Date: 2023-08-24
Authors@R:
  c(person(given = "Denis",
           family = "Kleverov",
           role = c("aut"),
           email = "denisk@wustl.edu",
           comment = c(ORCID = "0009-0002-1362-486X")),
    person(given = "Ekaterina",
           family = "Aladyeva",
           role = c("aut"),
           comment = c(ORCID = "0000-0002-3483-6944")),
    person(given = "Alexey",
           family = "Serdyukov",
           role = c("aut", "cre"),
           email = "leshaserdyukov@gmail.com",
           comment = c(ORCID = "0009-0004-4155-5237")),
    person(given = "Maxim",
           family = "Artyomov",
           email = "martyomov@wustl.edu",
           role = c("aut", "ths"),
          comment = c(ORCID = "0000-0002-1133-4212"))
           )
Maintainer: Alexey Serdyukov <leshaserdyukov@gmail.com>
Description: Gene expression deconvolution, based on finding SVD projections and dual simplex corners.
License: MIT + file LICENSE
biocViews:
Imports:
    Rcpp,
    RcppArmadillo,
    rlang,
    irlba,
    nnls,
    limma,
    Matrix,
    ggplot2,
    ggrastr,
    cowplot,
    gridExtra,
    RColorBrewer,
    reshape2,
    stringr,
    Hmisc,
    MASS,
    dplyr,
    tidyr,
    R6,
    Metrics,
    Biobase,
    uwot (>= 0.1.11),
    knitr,
    combinat,
    scales,
    linseed
Remotes: ctlab/linseed
Suggests:
    Seurat,
    gganimate
LinkingTo: Rcpp, RcppArmadillo
RoxygenNote: 7.3.1