.pre-commit-config.yaml

# Configuration for the `pre-commit` tool.
#
# *Note*: To override the check, add the `--no-verify` flag to your
# git command line
#
# To enable the checks' being invoked on `git commit`, run
#   ```
#   pip3 install pre-commit
#   pre-commit install
#   ```
#
# To run them manually before committing, type `pre-commit run`
default_language_version:
  python: python3.10
repos:
  # Data validity and file permissions
  - repo: https://github.com/pre-commit/pre-commit-hooks
    rev: v4.4.0
    hooks:
      - id: check-executables-have-shebangs
      - id: check-json
      - id: check-merge-conflict
        exclude: \.rst$
      - id: check-shebang-scripts-are-executable
      - id: check-toml
      - id: check-yaml
  # Formatting consistency
  # TODO: can't use main yapf while this issue is open
  # https://github.com/google/yapf/issues/1164
  #- repo: https://github.com/google/yapf
  #  rev: v0.40.2
  - repo: https://github.com/grananqvist/yapf
    rev: 438cb2825b220f2f64c5f5fd045cf378c466e749
    hooks:
      - id: yapf
        args:
          - --in-place
  # Style checks, common errors, etc.
  - repo: https://github.com/charliermarsh/ruff-pre-commit
    rev: "v0.0.290"
    hooks:
      - id: ruff
  # Static analysis for type checking
  - repo: https://github.com/pre-commit/mirrors-mypy
    rev: v1.5.0
    hooks:
    - id: mypy
      exclude: ^publications/
  # TODO: license header hook