r.yml

name: R build

on:
  push:
    branches:
      - master
    paths:
      - 'common/**'
      - 'spark/**'
      - 'spark-shaded/**'
      - 'pom.xml'
      - 'R/**'
      - '.github/workflows/r.yml'
  pull_request:
    branches:
      - '*'
    paths:
      - 'common/**'
      - 'spark/**'
      - 'spark-shaded/**'
      - 'pom.xml'
      - 'R/**'
      - '.github/workflows/r.yml'

env:
  MAVEN_OPTS: -Dmaven.wagon.httpconnectionManager.ttlSeconds=60
  DO_NOT_TRACK: true

jobs:
  build:
    runs-on: ubuntu-22.04
    strategy:
      fail-fast: true
      matrix:
        spark: [3.0.3, 3.1.2, 3.2.1, 3.3.0, 3.4.0, 3.5.0]
        hadoop: [3]
        scala: [2.12.15]
        r: [oldrel, release]
    env:
      SPARK_VERSION: ${{ matrix.spark }}
      HADOOP_VERSION: ${{ matrix.hadoop }}
      SCALA_VERSION: ${{ matrix.scala }}
      # Ensure the temporary auth token for this workflow, instead of the
      # bundled GitHub PAT from the `remotes` package is used for
      # `remotes::install_github()`
      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
    steps:
      - name: Delete existing R binaries
        run: |
          for b in R Rscript
          do
            while [ -n "$(which "$b")" ]
            do
              sudo rm -v "$(which "$b")"
            done
          done
        shell: bash
      - name: Delete existing JDK installation(s)
        run: |
          sudo apt-get -y remove --purge default-jdk adoptopenjdk-11-hotspot || :
        shell: bash
      - uses: actions/checkout@v4
      - uses: r-lib/actions/setup-r@v2.10.1
        with:
          r-version: ${{ matrix.r }}
          use-public-rspm: true
      - name: Query R dependencies
        uses: r-lib/actions/setup-r-dependencies@v2.10.1
        with:
          cache: true
          extra-packages: |
            any::testthat
            any::rcmdcheck
          working-directory : './R'
      - name: Build and check R package
        uses: r-lib/actions/check-r-package@v2.10.1
        with:
          build_args: 'c("--no-build-vignettes", "--no-manual")'
          args: 'c("--no-build-vignettes", "--no-manual", "--no-tests")'
          error-on: '"error"'
          working-directory: './R'
        env:
          _R_CHECK_FORCE_SUGGESTS_: false
      - name: Install apache.sedona from source
        run: Rscript -e 'install.packages("./R/", repos = NULL, type = "source")'
      - uses: actions/setup-java@v4
        with:
          distribution: 'temurin'
          java-version: '8'
          cache: 'maven'
      - name: Get OS name
        id: os-name
        run: |
          # `os_name` will be like "Ubuntu-20.04.1-LTS"
          OS_NAME=$(lsb_release -ds | sed 's/\s/-/g')
          echo "os-name=$OS_NAME" >> $GITHUB_OUTPUT
      - name: Cache Spark installations
        if: runner.os != 'Windows'
        uses: actions/cache@master
        with:
          path: ~/spark
          key: apache.sedona-apache-spark-${{ steps.os-name.outputs.os-name }}-${{ env.SPARK_VERSION }}
      - name: Build Sedona libraries
        run: |
          SPARK_COMPAT_VERSION=${SPARK_VERSION:0:3}
          mvn -q clean install -DskipTests -Dspark=${SPARK_COMPAT_VERSION} -Dscala=${SCALA_VERSION:0:4}
      - name: Run tests
        run: |
          if [[ "${SPARK_VERSION:0:3}" < "3.3" ]]; then
            case "$HADOOP_VERSION" in
              3)
                export HADOOP_VERSION=3.2
                ;;
              2)
                export HADOOP_VERSION=2.7
                ;;
            esac
          fi
          export SPARKLYR_LOG_FILE='/tmp/sparklyr.log'
          source ./.github/workflows/scripts/prepare_sparklyr_sedona_test_env.sh
          echo "Apache Sedona jar files: ${SEDONA_JAR_FILES}"
          cd ./R/tests
          NOT_CRAN='true' Rscript testthat.R
        shell: bash
      - uses: actions/upload-artifact@v3
        if: failure()
        with:
          name: Worker logs
          path: /tmp/sparklyr.log
      - name: Dump worker logs on failure
        if: failure()
        run: cat /tmp/sparklyr.log