From ddceba880870e3d364146c797aa4b785ccdfa832 Mon Sep 17 00:00:00 2001 From: joshuailevy Date: Tue, 19 Nov 2024 12:15:29 -0800 Subject: [PATCH] seq update --- Encina_sewage_seqs.csv | 55 ++++++++++---------- PointLoma_sewage_seqs.csv | 107 +++++++++++++++++++------------------- SouthBay_sewage_seqs.csv | 60 ++++++++++----------- rel_growth_rates.csv | 10 ++-- 4 files changed, 117 insertions(+), 115 deletions(-) diff --git a/Encina_sewage_seqs.csv b/Encina_sewage_seqs.csv index 986474b..92edf78 100644 --- a/Encina_sewage_seqs.csv +++ b/Encina_sewage_seqs.csv @@ -194,43 +194,44 @@ Date,BA.1,BA.1.1.X,BA.2.X,BA.2.12.X,BA.4.X,BA.5.X,BA.2.75,BA.4.6,BQ.1.X,BQ.1.1.X 2024-05-01,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,100.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0 2024-05-06,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,65.83,21.85,0.0,0.0,0.0,12.13,0.0,0.0,0.0,0.0,0.0,0.0,0.0 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interval -XEC.X,12.2%,"[5.87% , 32.28%]" -KP.3.1.1.X,6.3%,"[-2.61% , 14.98%]" -KP.3.X,0.4%,"[-9.79% , 10.55%]" -KP.2.X,-13.6%,"[-705.84% , 1.26%]" -JN.1.X,-24.0%,"[-522.05% , -6.86%]" +XEC.X,10.6%,"[4.51% , 38.84%]" +KP.3.1.1.X,4.3%,"[-3.12% , 14.41%]" +KP.2.X,0.9%,"[-53.34% , 34.76%]" +KP.3.X,-5.4%,"[-23.11% , 5.46%]" +JN.1.X,-10.7%,"[-95.29% , 34.95%]"