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Discuss discrete tree operations. #31

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stamatak opened this issue Jul 17, 2017 · 2 comments
Open

Discuss discrete tree operations. #31

stamatak opened this issue Jul 17, 2017 · 2 comments
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@stamatak
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A lot of discrete tree operations (IC/TC scores, tree plausibility analysis) and some new stuff (quartets and this paper here http://www.biorxiv.org/content/biorxiv/early/2017/06/23/154542.full.pdf) should not go into raxml-ng but rather to the modules. We need to discuss this at some point, but I think all operations on a discrete set of trees that don't require likelihood calculations should not be part of RAxML-NG.
@stamatak
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We discussed that today and came to a good conclusion -> bootstopping gets directly integrated, the rest goes into a separate tool

@stamatak
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low priority as most of this functionality is also provided by old standard RAxML

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