diff --git a/cdk/amplify-production-stack.ts b/cdk/amplify-production-stack.ts index d88e9091..0afa73ac 100644 --- a/cdk/amplify-production-stack.ts +++ b/cdk/amplify-production-stack.ts @@ -29,6 +29,7 @@ export class AmplifyProductionStack extends cdk.Stack { { source: '/jbrowsedata/XenBaseXLJBrowse/<*>', target: 'https://jbrowse.xenbase.org/XenJBrowse/data/xl9_2/<*>', status: amplify.RedirectStatus.REWRITE }, { source: '/jbrowsedata/XenBaseData/<*>', target: 'https://jbrowse.xenbase.org/XenJBrowse/<*>', status: amplify.RedirectStatus.REWRITE }, { source: '/jbrowsedata/RGDJBrowse/<*>', target: 'https://rgd.mcw.edu/jbrowse2/<*>', status: amplify.RedirectStatus.REWRITE }, + { source: '/jbrowsedata/XenBaseBigFtp/<*>', target: 'https://bigftp.xenbase.org/pub/xenbase/genomics/<*>', status: amplify.RedirectStatus.REWRITE }, { source: '/jbrowse/worms/protein', target: 'https://www.alliancegenome.org/jbrowse/worms/protein/', status: amplify.RedirectStatus.PERMANENT_REDIRECT }, { source: '/jbrowse/worms/protein/', target: 'https://main.djgvd7iswt7yy.amplifyapp.com/', status: amplify.RedirectStatus.REWRITE }, { source: '/jbrowse/worms/protein/<*>', target: 'https://main.djgvd7iswt7yy.amplifyapp.com/<*>', status: amplify.RedirectStatus.REWRITE }, diff --git a/cdk/amplify-stage-stack.ts b/cdk/amplify-stage-stack.ts index 702b80b8..dc9edafc 100644 --- a/cdk/amplify-stage-stack.ts +++ b/cdk/amplify-stage-stack.ts @@ -24,6 +24,7 @@ export class AmplifyStageStack extends cdk.Stack { { source: '/jbrowsedata/XenBaseXLJBrowse/<*>', target: 'https://jbrowse.xenbase.org/XenJBrowse/data/xl9_2/<*>', status: amplify.RedirectStatus.REWRITE }, { source: '/jbrowsedata/XenBaseData/<*>', target: 'https://jbrowse.xenbase.org/XenJBrowse/<*>', status: amplify.RedirectStatus.REWRITE }, { source: '/jbrowsedata/RGDJBrowse/<*>', target: 'https://rgd.mcw.edu/jbrowse2/<*>', status: amplify.RedirectStatus.REWRITE }, + { source: '/jbrowsedata/XenBaseBigFtp/<*>', target: 'https://bigftp.xenbase.org/pub/xenbase/genomics/<*>', status: amplify.RedirectStatus.REWRITE }, { source: '/jbrowse/worms/protein', target: 'https://stage.alliancegenome.org/jbrowse/worms/protein/', status: amplify.RedirectStatus.PERMANENT_REDIRECT }, { source: '/jbrowse/worms/protein/', target: 'https://staging.djgvd7iswt7yy.amplifyapp.com/', status: amplify.RedirectStatus.REWRITE }, { source: '/jbrowse/worms/protein/<*>', target: 'https://staging.djgvd7iswt7yy.amplifyapp.com/<*>', status: amplify.RedirectStatus.REWRITE }, diff --git a/cdk/amplify-test-stack.ts b/cdk/amplify-test-stack.ts index a13af5dc..772ee26e 100644 --- a/cdk/amplify-test-stack.ts +++ b/cdk/amplify-test-stack.ts @@ -25,6 +25,7 @@ export class AmplifyTestStack extends cdk.Stack { { source: '/jbrowsedata/XenBaseXLJBrowse/<*>', target: 'https://jbrowse.xenbase.org/XenJBrowse/data/xl9_2/<*>', status: amplify.RedirectStatus.REWRITE }, { source: '/jbrowsedata/XenBaseData/<*>', target: 'https://jbrowse.xenbase.org/XenJBrowse/<*>', status: amplify.RedirectStatus.REWRITE }, { source: '/jbrowsedata/RGDJBrowse/<*>', target: 'https://rgd.mcw.edu/jbrowse2/<*>', status: amplify.RedirectStatus.REWRITE }, + { source: '/jbrowsedata/XenBaseBigFtp/<*>', target: 'https://bigftp.xenbase.org/pub/xenbase/genomics/<*>', status: amplify.RedirectStatus.REWRITE }, { source: '/jbrowse/worms/protein', target: 'https://test.alliancegenome.org/jbrowse/worms/protein/', status: amplify.RedirectStatus.PERMANENT_REDIRECT }, { source: '/jbrowse/worms/protein/', target: 'https://main.djgvd7iswt7yy.amplifyapp.com/', status: amplify.RedirectStatus.REWRITE }, { source: '/jbrowse/worms/protein/<*>', target: 'https://main.djgvd7iswt7yy.amplifyapp.com/<*>', status: amplify.RedirectStatus.REWRITE }, diff --git a/package.json b/package.json index 9e9c6cfa..28178952 100644 --- a/package.json +++ b/package.json @@ -13,7 +13,7 @@ "@fortawesome/free-solid-svg-icons": "^6.5.2", "@fortawesome/react-fontawesome": "^0.2.2", "@geneontology/curie-util-es5": "^1.2.4", - "@geneontology/wc-gocam-viz": "1.0.0", + "@geneontology/wc-gocam-viz": "1.0.1-beta.2", "@geneontology/wc-ribbon-strips": "0.0.37", "@geneontology/wc-ribbon-table": "0.0.57", "@testing-library/jest-dom": "^5.16.1", @@ -96,4 +96,4 @@ "devDependencies": { "ajv": "^8.16.0" } -} +} \ No newline at end of file diff --git a/src/containers/alzheimersPage/DiseasePortalSection.js b/src/containers/alzheimersPage/DiseasePortalSection.js index 98484637..45075152 100644 --- a/src/containers/alzheimersPage/DiseasePortalSection.js +++ b/src/containers/alzheimersPage/DiseasePortalSection.js @@ -28,35 +28,34 @@ const DiseasePortalSection = () => { to='/disease/DOID:10652#associated-models' tooltip='View all associated models' > - [3000]Models + 213Models - [1221]Genes + 2,939Genes - [1000]Alleles + 268Alleles - [96000]Publications + 96,000Publications - [9]Species + 9Species diff --git a/src/containers/alzheimersPage/PapersSection.js b/src/containers/alzheimersPage/PapersSection.js index fdff0f76..e43b484a 100644 --- a/src/containers/alzheimersPage/PapersSection.js +++ b/src/containers/alzheimersPage/PapersSection.js @@ -1,13 +1,33 @@ import React from 'react'; import style from './style.module.scss'; +import ExternalLink from '../../components/ExternalLink'; const PapersSection = () => { + const publications = [ + {pmid: '39143479', title: "Gene therapy in Aβ-induced cell and mouse models of Alzheimer's disease through compensating defective mitochondrial complex I function"}, + {pmid: '38526283', title: "Activation of autophagy by Citri Reticulatae Semen extract ameliorates amyloid-beta-induced cell death and cognition deficits in Alzheimer's disease"}, + {pmid: '38950494', title: "Nesfatin-1 ameliorates pathological abnormalities in Drosophila hTau model of Alzheimer's disease"}, + {pmid: '38827230', title: "Aluminum chloride and D-galactose induced a zebrafish model of Alzheimer's disease with cognitive deficits and aging"}, + {pmid: '37515920', title: "Discovery of triazole-bridged aryl adamantane analogs as an intriguing class of multifunctional agents for treatment of Alzheimer's disease"}, + {pmid: '39009412', title: "c-KIT inhibitors reduce pathology and improve behavior in the Tg(SwDI) model of Alzheimer's disease"}, + {pmid: '37736695', title: "Melatonin regulates the circadian rhythm to ameliorate postoperative sleep disorder and neurobehavioral abnormalities in aged mice"}, + ]; + return ( Recent Papers + + {publications.map((publication) => { + return ( + + {publication.title} + + ) + })} + diff --git a/src/containers/alzheimersPage/ResourcesSection.js b/src/containers/alzheimersPage/ResourcesSection.js index f3384986..6eed3cc5 100644 --- a/src/containers/alzheimersPage/ResourcesSection.js +++ b/src/containers/alzheimersPage/ResourcesSection.js @@ -7,8 +7,10 @@ const ResourcesSection = () => { const resourceLinks = [ {title: "Alzhemiers.gov", url: 'https://www.alzheimers.gov/'}, {title: "Alzhemier's Association", url: 'https://www.alz.org/'}, + {title: "Alzheimer's Disease Clinical Trials", url: 'https://www.clinicaltrials.gov/search?cond=Alzheimer%20Disease'}, {title: "Alzhemier's Foundation of America", url: 'https://alzfdn.org/'}, {title: "National Institute on Aging", url: 'https://www.nia.nih.gov/'}, + {title: "OMIM", url: 'https://omim.org/entry/104300'}, ]; return ( diff --git a/src/containers/alzheimersPage/index.js b/src/containers/alzheimersPage/index.js index 1484359f..0128a506 100644 --- a/src/containers/alzheimersPage/index.js +++ b/src/containers/alzheimersPage/index.js @@ -4,6 +4,8 @@ import PapersSection from './PapersSection'; import ResourcesSection from './ResourcesSection'; import DiseasePortalSection from './DiseasePortalSection'; import MembersSection from '../../components/MembersSection'; +import { HELP_EMAIL } from '../../constants'; + const AlzheimersPage = () => { @@ -11,10 +13,13 @@ const AlzheimersPage = () => { - + + Need Help? Contact Us: {HELP_EMAIL} + + );
+ {publication.title} +