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DESCRIPTION
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DESCRIPTION
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Package: OmicNavigator
Type: Package
Title: Open-Source Software for 'Omic' Data Analysis and Visualization
Description:
A tool for interactive exploration of the results from 'omics'
experiments to facilitate novel discoveries from high-throughput biology. The
software includes R functions for the 'bioinformatician' to deposit study
metadata and the outputs from statistical analyses (e.g. differential
expression, enrichment). These results are then exported to an interactive
JavaScript dashboard that can be interrogated on the user's local machine or
deployed online to be explored by collaborators. The dashboard includes
'sortable' tables, interactive plots including network visualization, and
fine-grained filtering based on statistical significance.
Version: 1.14.2
Authors@R: c(
person("Terrence", "Ernst", role = c("aut"),
comment = "Web application"),
person("John", "Blischak", role = c("aut", "cre"),
email = "[email protected]",
comment = c(ORCID = "0000-0003-2634-9879")),
person("Paul", "Nordlund", role = c("aut"),
comment = "Web application"),
person("Justin", "Moore", role = c("aut"),
comment = "UpSet-related functions and web application"),
person("Joe", "Dalen", role = c("aut"),
comment = "Barcode functionality and web application"),
person("Akshay", "Bhamidipati", role = c("aut"),
comment = "Web application"),
person("Brett", "Engelmann", role = c("aut"),
email = "[email protected]"),
person("Marco", "Curado", role = c("aut"),
comment = "Improved plotting capabilities"),
person("Joe", "LoGrasso", role = c("aut"),
comment = "Support for plotly"),
person(given = "AbbVie Inc.", role = c("cph", "fnd"))
)
URL: https://github.com/abbvie-external/OmicNavigator
BugReports: https://github.com/abbvie-external/OmicNavigator/issues
License: MIT + file LICENSE
License_restricts_use: no
License_is_FOSS: yes
Encoding: UTF-8
LazyData: true
Depends:
R (>= 3.2.0)
Imports:
data.table (>= 1.12.4),
graphics,
jsonlite,
stats,
tools,
utils
Suggests:
faviconPlease,
ggplot2,
opencpu,
plotly,
tinytest (>= 1.2.3),
ttdo (>= 0.0.6),
UpSetR
RoxygenNote: 7.3.1
Roxygen: list(markdown = TRUE)