DESCRIPTION

Package: MicrobiomeProfiler
Title: An R/shiny package for microbiome functional enrichment analysis
Version: 1.11.1
Authors@R: c(
    person(given = "Guangchuang", family = "Yu", email = "guangchuangyu@gmail.com", role  = c("cre", "aut"), comment = c(ORCID = "0000-0002-6485-8781")),
    person(given = "Meijun",family = "Chen", role = "aut", email = "mjchen1996@outlook.com", comment = c(ORCID = "0000-0003-2486-8106"))    
    )
Description: This is an R/shiny package to perform functional enrichment analysis for microbiome data. 
             This package was based on clusterProfiler. Moreover, MicrobiomeProfiler support KEGG enrichment analysis,
             COG enrichment analysis, Microbe-Disease association enrichment analysis, Metabo-Pathway analysis.
License: GPL-2
Depends: 
    R (>= 4.2.0)
Imports: 
    clusterProfiler (>= 4.5.2),
    config,
    DT,
    enrichplot,
    golem,
    gson,
    methods,
    magrittr,
    shiny (>= 1.6.0),
    shinyWidgets,
    shinycustomloader,
    htmltools,
    ggplot2,
    graphics,
    stats,
    utils,
    yulab.utils
Suggests: 
    rmarkdown,
    knitr,
    testthat (>= 3.0.0),
    prettydoc
Encoding: UTF-8
biocViews: Microbiome, Software, Visualization,KEGG
RoxygenNote: 7.3.2
URL: https://github.com/YuLab-SMU/MicrobiomeProfiler/, https://yulab-smu.top/contribution-knowledge-mining/
BugReports: https://github.com/YuLab-SMU/MicrobiomeProfiler/issues
Config/testthat/edition: 3
VignetteBuilder: knitr