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How to add CARD result to Seurat object #75
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Hi @GouQiao, Thank you for the question! I think you can add the cell type compositions from CARD into Seurat by manually adding it to:
Please see more details in their tutorial: https://satijalab.org/seurat/articles/spatial_vignette We can work on that later since it takes some time for us to check the details. Best, |
Thanks for your patient reply. |
Hi developer,
Thanks for developing such amazing package for ST analysis.
After deconvolution by CARD, how to add the results of CARD object to Seurat data for downstream analysis ?
for example, add the info into meta.data of Seurat object.
best,
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