-
Notifications
You must be signed in to change notification settings - Fork 21
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
location of the deconvoluted spots #57
Comments
@YingMa0107 wanted to see if you have any response to this? |
Hi @chrkuo, Based on your question, you can select the spots based on your threshold on the estimated cell type proportions, and then perform downstream correlation analysis with the gene sets. Best, |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Hi,
I am wondering after deconvolution is it possible to see which specific "spot" has what proportions of cell types and in return look at that spots gene enrichment and do a correlation analysis.
The text was updated successfully, but these errors were encountered: