From 2a2fa5bb822961e7be25c78568a5b0eecdf0f6c0 Mon Sep 17 00:00:00 2001
From: "Scott Havens (ubuntu)" <shavens@usbr.gov>
Date: Tue, 28 Mar 2017 11:22:19 -0600
Subject: [PATCH] vic2netcdf.py in standard mode not assigning to array with
 chunking. fixes issue #62

---
 .gitignore                     | 3 +++
 tonic/models/vic/vic2netcdf.py | 9 ++++++---
 tonic/version.py               | 2 +-
 3 files changed, 10 insertions(+), 4 deletions(-)

diff --git a/.gitignore b/.gitignore
index c1a94b9..2f0f8ff 100644
--- a/.gitignore
+++ b/.gitignore
@@ -55,3 +55,6 @@ Thumbs.db
 *.sublime-*
 
 tonic.egg-info
+
+.pydevproject
+.project
diff --git a/tonic/models/vic/vic2netcdf.py b/tonic/models/vic/vic2netcdf.py
index c6b218e..ca888f3 100644
--- a/tonic/models/vic/vic2netcdf.py
+++ b/tonic/models/vic/vic2netcdf.py
@@ -456,10 +456,13 @@ def nc_add_data_to_array(self, point):
     def nc_add_data_standard(self, points):
         ys = points.get_ys()
         xs = points.get_xs()
+        
+        for name in self.three_dim_vars:
+            data = points.get_data(name, self.slice)
+            for i in range(len(ys)):
+                self.f.variables[name][:, ys[i], xs[i]] = data[i,:]
+        
         for p in points:
-            for name in self.three_dim_vars:
-                data = points.get_data(name, self.slice)
-                self.f.variables[name][:, ys, xs] = data
             for name in self.four_dim_vars:
                 varshape = self.f.variables[name].shape[1]
                 for i in pyrange(varshape):
diff --git a/tonic/version.py b/tonic/version.py
index a68e94b..012f2a3 100644
--- a/tonic/version.py
+++ b/tonic/version.py
@@ -1,2 +1,2 @@
-version = '0.0.0.dev-7b09158'
+version = '0.0.0.dev-190aca2'
 short_version = '0.0.0'