transform structure

UBCMint · Nov 17, 2024 · e2eeebe · e2eeebe
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commit e2eeebe
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Showing 76 changed files with 33 additions and 29 deletions.
diff --git a/.dvc/config b/.dvc/config
diff --git a/.github/workflows/nextjs.yml b/.github/workflows/nextjs.yml
@@ -14,36 +14,36 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout
-        uses: actions/checkout@v4
-      
-        # - name: Detect package manager
-      #   id: detect-package-manager
-      #   run: |
-      #     if [ -f "${{ github.workspace }}/yarn.lock" ]; then
-      #       echo "manager=yarn" >> $GITHUB_OUTPUT
-      #       echo "command=install" >> $GITHUB_OUTPUT
-      #       echo "runner=yarn" >> $GITHUB_OUTPUT
-      #       exit 0
-      #     elif [ -f "${{ github.workspace }}/package.json" ]; then
-      #       echo "manager=npm" >> $GITHUB_OUTPUT
-      #       echo "command=ci" >> $GITHUB_OUTPUT
-      #       echo "runner=npx --no-install" >> $GITHUB_OUTPUT
-      #       exit 0
-      #     else
-      #       echo "Unable to determine package manager"
-      #       exit 1
-      #     fi
+        uses: actions/checkout@v4     
+
+        - name: Detect package manager
+        id: detect-package-manager
+        run: |
+          if [ -f "${{ github.workspace }}/yarn.lock" ]; then
+            echo "manager=yarn" >> $GITHUB_OUTPUT
+            echo "command=install" >> $GITHUB_OUTPUT
+            echo "runner=yarn" >> $GITHUB_OUTPUT
+            exit 0
+          elif [ -f "${{ github.workspace }}/package.json" ]; then
+            echo "manager=npm" >> $GITHUB_OUTPUT
+            echo "command=ci" >> $GITHUB_OUTPUT
+            echo "runner=npx --no-install" >> $GITHUB_OUTPUT
+            exit 0
+          else
+            echo "Unable to determine package manager"
+            exit 1
+          fi
 
-      # - name: Setup Node
+      - name: Setup Node
 
-      #   uses: actions/setup-node@v4
-      #   with:
-      #     node-version: "20"
-      #     cache: ${{ steps.detect-package-manager.outputs.manager }}
-      #   uses: actions/setup-node@v4
-      #   with:
-      #     node-version: '20'
-      #     cache: 'npm'
+        uses: actions/setup-node@v4
+        with:
+          node-version: "20"
+          cache: ${{ steps.detect-package-manager.outputs.manager }}
+        uses: actions/setup-node@v4
+        with:
+          node-version: '20'
+          cache: 'npm'
 
       - name: Install dependencies
         # run: ${{ steps.detect-package-manager.outputs.manager }} ${{ steps.detect-package-manager.outputs.command }}
@@ -71,7 +71,7 @@ jobs:
         run: echo "success" > success.txt
 
       - name: Upload artifact
-        uses: actions/upload-artifact@v3
+        uses: actions/upload-artifact@v4
         with:
           name: nextjs-build-success
           path: success.txt
diff --git a/.dvc/.gitignore → mlops/.dvc/.gitignore b/.dvc/.gitignore → mlops/.dvc/.gitignore
diff --git a/mlops/.dvc/config b/mlops/.dvc/config
@@ -0,0 +1,4 @@
+[core]
+    remote = myremote
+['remote "myremote"']
+    url = ../dvcstore
diff --git a/.dvcignore → mlops/.dvcignore b/.dvcignore → mlops/.dvcignore
diff --git a/.gitignore → mlops/.gitignore b/.gitignore → mlops/.gitignore
diff --git a/README.md → mlops/README.md b/README.md → mlops/README.md
diff --git a/data/raw/.gitignore → mlops/data/raw/.gitignore b/data/raw/.gitignore → mlops/data/raw/.gitignore
diff --git a/data/raw/sample_raw_data.npz.dvc → mlops/data/raw/sample_raw_data.npz.dvc b/data/raw/sample_raw_data.npz.dvc → mlops/data/raw/sample_raw_data.npz.dvc
diff --git a/...les/md5/7a/d55b27a8d54df0607e2e236a64e48c → ...ore/md5/7a/d55b27a8d54df0607e2e236a64e48c b/...les/md5/7a/d55b27a8d54df0607e2e236a64e48c → ...ore/md5/7a/d55b27a8d54df0607e2e236a64e48c
diff --git a/...les/md5/93/df86625dc08eaa22ff7239a5b0881e → ...ore/md5/93/df86625dc08eaa22ff7239a5b0881e b/...les/md5/93/df86625dc08eaa22ff7239a5b0881e → ...ore/md5/93/df86625dc08eaa22ff7239a5b0881e
diff --git a/main.py → mlops/main.py b/main.py → mlops/main.py
diff --git a/mlruns/0/meta.yaml → mlops/mlruns/0/meta.yaml b/mlruns/0/meta.yaml → mlops/mlruns/0/meta.yaml
diff --git a/...0a55980f3fb5f1613/artifacts/model/MLmodel → ...0a55980f3fb5f1613/artifacts/model/MLmodel b/...0a55980f3fb5f1613/artifacts/model/MLmodel → ...0a55980f3fb5f1613/artifacts/model/MLmodel
diff --git a/...5980f3fb5f1613/artifacts/model/conda.yaml → ...5980f3fb5f1613/artifacts/model/conda.yaml b/...5980f3fb5f1613/artifacts/model/conda.yaml → ...5980f3fb5f1613/artifacts/model/conda.yaml
diff --git a/...f3fb5f1613/artifacts/model/data/model.pth → ...f3fb5f1613/artifacts/model/data/model.pth b/...f3fb5f1613/artifacts/model/data/model.pth → ...f3fb5f1613/artifacts/model/data/model.pth
diff --git a/...tifacts/model/data/pickle_module_info.txt → ...tifacts/model/data/pickle_module_info.txt b/...tifacts/model/data/pickle_module_info.txt → ...tifacts/model/data/pickle_module_info.txt
diff --git a/...3fb5f1613/artifacts/model/python_env.yaml → ...3fb5f1613/artifacts/model/python_env.yaml b/...3fb5f1613/artifacts/model/python_env.yaml → ...3fb5f1613/artifacts/model/python_env.yaml
diff --git a/...fb5f1613/artifacts/model/requirements.txt → ...fb5f1613/artifacts/model/requirements.txt b/...fb5f1613/artifacts/model/requirements.txt → ...fb5f1613/artifacts/model/requirements.txt
diff --git a/...mary_52a68e2e46eb4fe0a55980f3fb5f1613.txt → ...mary_52a68e2e46eb4fe0a55980f3fb5f1613.txt b/...mary_52a68e2e46eb4fe0a55980f3fb5f1613.txt → ...mary_52a68e2e46eb4fe0a55980f3fb5f1613.txt
diff --git a/...2a68e2e46eb4fe0a55980f3fb5f1613/meta.yaml → ...2a68e2e46eb4fe0a55980f3fb5f1613/meta.yaml b/...2a68e2e46eb4fe0a55980f3fb5f1613/meta.yaml → ...2a68e2e46eb4fe0a55980f3fb5f1613/meta.yaml
diff --git a/...46eb4fe0a55980f3fb5f1613/metrics/accuracy → ...46eb4fe0a55980f3fb5f1613/metrics/accuracy b/...46eb4fe0a55980f3fb5f1613/metrics/accuracy → ...46eb4fe0a55980f3fb5f1613/metrics/accuracy
diff --git a/...fe0a55980f3fb5f1613/metrics/eval_accuracy → ...fe0a55980f3fb5f1613/metrics/eval_accuracy b/...fe0a55980f3fb5f1613/metrics/eval_accuracy → ...fe0a55980f3fb5f1613/metrics/eval_accuracy
diff --git a/...6eb4fe0a55980f3fb5f1613/metrics/eval_loss → ...6eb4fe0a55980f3fb5f1613/metrics/eval_loss b/...6eb4fe0a55980f3fb5f1613/metrics/eval_loss → ...6eb4fe0a55980f3fb5f1613/metrics/eval_loss
diff --git a/...8e2e46eb4fe0a55980f3fb5f1613/metrics/loss → ...8e2e46eb4fe0a55980f3fb5f1613/metrics/loss b/...8e2e46eb4fe0a55980f3fb5f1613/metrics/loss → ...8e2e46eb4fe0a55980f3fb5f1613/metrics/loss
diff --git a/...6eb4fe0a55980f3fb5f1613/params/batch_size → ...6eb4fe0a55980f3fb5f1613/params/batch_size b/...6eb4fe0a55980f3fb5f1613/params/batch_size → ...6eb4fe0a55980f3fb5f1613/params/batch_size
diff --git a/...b4fe0a55980f3fb5f1613/params/data_version → ...b4fe0a55980f3fb5f1613/params/data_version b/...b4fe0a55980f3fb5f1613/params/data_version → ...b4fe0a55980f3fb5f1613/params/data_version
diff --git a/...e2e46eb4fe0a55980f3fb5f1613/params/epochs → ...e2e46eb4fe0a55980f3fb5f1613/params/epochs b/...e2e46eb4fe0a55980f3fb5f1613/params/epochs → ...e2e46eb4fe0a55980f3fb5f1613/params/epochs
diff --git a/...4fe0a55980f3fb5f1613/params/learning_rate → ...4fe0a55980f3fb5f1613/params/learning_rate b/...4fe0a55980f3fb5f1613/params/learning_rate → ...4fe0a55980f3fb5f1613/params/learning_rate
diff --git a/...4fe0a55980f3fb5f1613/params/loss_function → ...4fe0a55980f3fb5f1613/params/loss_function b/...4fe0a55980f3fb5f1613/params/loss_function → ...4fe0a55980f3fb5f1613/params/loss_function
diff --git a/...e0a55980f3fb5f1613/params/metric_function → ...e0a55980f3fb5f1613/params/metric_function b/...e0a55980f3fb5f1613/params/metric_function → ...e0a55980f3fb5f1613/params/metric_function
diff --git a/...46eb4fe0a55980f3fb5f1613/params/optimizer → ...46eb4fe0a55980f3fb5f1613/params/optimizer b/...46eb4fe0a55980f3fb5f1613/params/optimizer → ...46eb4fe0a55980f3fb5f1613/params/optimizer
diff --git a/...0f3fb5f1613/tags/mlflow.log-model.history → ...0f3fb5f1613/tags/mlflow.log-model.history b/...0f3fb5f1613/tags/mlflow.log-model.history → ...0f3fb5f1613/tags/mlflow.log-model.history
diff --git a/...b4fe0a55980f3fb5f1613/tags/mlflow.runName → ...b4fe0a55980f3fb5f1613/tags/mlflow.runName b/...b4fe0a55980f3fb5f1613/tags/mlflow.runName → ...b4fe0a55980f3fb5f1613/tags/mlflow.runName
diff --git a/...0f3fb5f1613/tags/mlflow.source.git.commit → ...0f3fb5f1613/tags/mlflow.source.git.commit b/...0f3fb5f1613/tags/mlflow.source.git.commit → ...0f3fb5f1613/tags/mlflow.source.git.commit
diff --git a/...0a55980f3fb5f1613/tags/mlflow.source.name → ...0a55980f3fb5f1613/tags/mlflow.source.name b/...0a55980f3fb5f1613/tags/mlflow.source.name → ...0a55980f3fb5f1613/tags/mlflow.source.name
diff --git a/...0a55980f3fb5f1613/tags/mlflow.source.type → ...0a55980f3fb5f1613/tags/mlflow.source.type b/...0a55980f3fb5f1613/tags/mlflow.source.type → ...0a55980f3fb5f1613/tags/mlflow.source.type
diff --git a/...46eb4fe0a55980f3fb5f1613/tags/mlflow.user → ...46eb4fe0a55980f3fb5f1613/tags/mlflow.user b/...46eb4fe0a55980f3fb5f1613/tags/mlflow.user → ...46eb4fe0a55980f3fb5f1613/tags/mlflow.user
diff --git a/...28b5f876f1599f7a7/artifacts/model/MLmodel → ...28b5f876f1599f7a7/artifacts/model/MLmodel b/...28b5f876f1599f7a7/artifacts/model/MLmodel → ...28b5f876f1599f7a7/artifacts/model/MLmodel
diff --git a/...5f876f1599f7a7/artifacts/model/conda.yaml → ...5f876f1599f7a7/artifacts/model/conda.yaml b/...5f876f1599f7a7/artifacts/model/conda.yaml → ...5f876f1599f7a7/artifacts/model/conda.yaml
diff --git a/...6f1599f7a7/artifacts/model/data/model.pth → ...6f1599f7a7/artifacts/model/data/model.pth b/...6f1599f7a7/artifacts/model/data/model.pth → ...6f1599f7a7/artifacts/model/data/model.pth
diff --git a/...tifacts/model/data/pickle_module_info.txt → ...tifacts/model/data/pickle_module_info.txt b/...tifacts/model/data/pickle_module_info.txt → ...tifacts/model/data/pickle_module_info.txt
diff --git a/...f1599f7a7/artifacts/model/python_env.yaml → ...f1599f7a7/artifacts/model/python_env.yaml b/...f1599f7a7/artifacts/model/python_env.yaml → ...f1599f7a7/artifacts/model/python_env.yaml
diff --git a/...1599f7a7/artifacts/model/requirements.txt → ...1599f7a7/artifacts/model/requirements.txt b/...1599f7a7/artifacts/model/requirements.txt → ...1599f7a7/artifacts/model/requirements.txt
diff --git a/...mary_c38d9f13d19b47528b5f876f1599f7a7.txt → ...mary_c38d9f13d19b47528b5f876f1599f7a7.txt b/...mary_c38d9f13d19b47528b5f876f1599f7a7.txt → ...mary_c38d9f13d19b47528b5f876f1599f7a7.txt
diff --git a/...38d9f13d19b47528b5f876f1599f7a7/meta.yaml → ...38d9f13d19b47528b5f876f1599f7a7/meta.yaml b/...38d9f13d19b47528b5f876f1599f7a7/meta.yaml → ...38d9f13d19b47528b5f876f1599f7a7/meta.yaml
diff --git a/...d19b47528b5f876f1599f7a7/metrics/accuracy → ...d19b47528b5f876f1599f7a7/metrics/accuracy b/...d19b47528b5f876f1599f7a7/metrics/accuracy → ...d19b47528b5f876f1599f7a7/metrics/accuracy
diff --git a/...7528b5f876f1599f7a7/metrics/eval_accuracy → ...7528b5f876f1599f7a7/metrics/eval_accuracy b/...7528b5f876f1599f7a7/metrics/eval_accuracy → ...7528b5f876f1599f7a7/metrics/eval_accuracy
diff --git a/...19b47528b5f876f1599f7a7/metrics/eval_loss → ...19b47528b5f876f1599f7a7/metrics/eval_loss b/...19b47528b5f876f1599f7a7/metrics/eval_loss → ...19b47528b5f876f1599f7a7/metrics/eval_loss
diff --git a/...9f13d19b47528b5f876f1599f7a7/metrics/loss → ...9f13d19b47528b5f876f1599f7a7/metrics/loss b/...9f13d19b47528b5f876f1599f7a7/metrics/loss → ...9f13d19b47528b5f876f1599f7a7/metrics/loss
diff --git a/...19b47528b5f876f1599f7a7/params/batch_size → ...19b47528b5f876f1599f7a7/params/batch_size b/...19b47528b5f876f1599f7a7/params/batch_size → ...19b47528b5f876f1599f7a7/params/batch_size
diff --git a/...b47528b5f876f1599f7a7/params/data_version → ...b47528b5f876f1599f7a7/params/data_version b/...b47528b5f876f1599f7a7/params/data_version → ...b47528b5f876f1599f7a7/params/data_version
diff --git a/...f13d19b47528b5f876f1599f7a7/params/epochs → ...f13d19b47528b5f876f1599f7a7/params/epochs b/...f13d19b47528b5f876f1599f7a7/params/epochs → ...f13d19b47528b5f876f1599f7a7/params/epochs
diff --git a/...47528b5f876f1599f7a7/params/learning_rate → ...47528b5f876f1599f7a7/params/learning_rate b/...47528b5f876f1599f7a7/params/learning_rate → ...47528b5f876f1599f7a7/params/learning_rate
diff --git a/...47528b5f876f1599f7a7/params/loss_function → ...47528b5f876f1599f7a7/params/loss_function b/...47528b5f876f1599f7a7/params/loss_function → ...47528b5f876f1599f7a7/params/loss_function
diff --git a/...528b5f876f1599f7a7/params/metric_function → ...528b5f876f1599f7a7/params/metric_function b/...528b5f876f1599f7a7/params/metric_function → ...528b5f876f1599f7a7/params/metric_function
diff --git a/...d19b47528b5f876f1599f7a7/params/optimizer → ...d19b47528b5f876f1599f7a7/params/optimizer b/...d19b47528b5f876f1599f7a7/params/optimizer → ...d19b47528b5f876f1599f7a7/params/optimizer
diff --git a/...76f1599f7a7/tags/mlflow.log-model.history → ...76f1599f7a7/tags/mlflow.log-model.history b/...76f1599f7a7/tags/mlflow.log-model.history → ...76f1599f7a7/tags/mlflow.log-model.history
diff --git a/...b47528b5f876f1599f7a7/tags/mlflow.runName → ...b47528b5f876f1599f7a7/tags/mlflow.runName b/...b47528b5f876f1599f7a7/tags/mlflow.runName → ...b47528b5f876f1599f7a7/tags/mlflow.runName
diff --git a/...76f1599f7a7/tags/mlflow.source.git.commit → ...76f1599f7a7/tags/mlflow.source.git.commit b/...76f1599f7a7/tags/mlflow.source.git.commit → ...76f1599f7a7/tags/mlflow.source.git.commit
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diff --git a/...d19b47528b5f876f1599f7a7/tags/mlflow.user → ...d19b47528b5f876f1599f7a7/tags/mlflow.user b/...d19b47528b5f876f1599f7a7/tags/mlflow.user → ...d19b47528b5f876f1599f7a7/tags/mlflow.user
diff --git a/mlruns/344322571351468695/meta.yaml → mlops/mlruns/344322571351468695/meta.yaml b/mlruns/344322571351468695/meta.yaml → mlops/mlruns/344322571351468695/meta.yaml
diff --git a/...ata/files/eegmmidb/1.0.0/S001/S001R06.edf → ...ata/files/eegmmidb/1.0.0/S001/S001R06.edf b/...ata/files/eegmmidb/1.0.0/S001/S001R06.edf → ...ata/files/eegmmidb/1.0.0/S001/S001R06.edf
diff --git a/...ata/files/eegmmidb/1.0.0/S001/S001R10.edf → ...ata/files/eegmmidb/1.0.0/S001/S001R10.edf b/...ata/files/eegmmidb/1.0.0/S001/S001R10.edf → ...ata/files/eegmmidb/1.0.0/S001/S001R10.edf
diff --git a/...ata/files/eegmmidb/1.0.0/S001/S001R14.edf → ...ata/files/eegmmidb/1.0.0/S001/S001R14.edf b/...ata/files/eegmmidb/1.0.0/S001/S001R14.edf → ...ata/files/eegmmidb/1.0.0/S001/S001R14.edf
diff --git a/...mary_52a68e2e46eb4fe0a55980f3fb5f1613.txt → ...mary_52a68e2e46eb4fe0a55980f3fb5f1613.txt b/...mary_52a68e2e46eb4fe0a55980f3fb5f1613.txt → ...mary_52a68e2e46eb4fe0a55980f3fb5f1613.txt
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diff --git a/pyproject.toml → mlops/pyproject.toml b/pyproject.toml → mlops/pyproject.toml
diff --git a/requirements.txt → mlops/requirements.txt b/requirements.txt → mlops/requirements.txt
diff --git a/src/__init__.py → mlops/src/__init__.py b/src/__init__.py → mlops/src/__init__.py
diff --git a/src/data_ingestion.py → mlops/src/data_ingestion.py b/src/data_ingestion.py → mlops/src/data_ingestion.py
diff --git a/src/model.py → mlops/src/model.py b/src/model.py → mlops/src/model.py
diff --git a/src/train.py → mlops/src/train.py b/src/train.py → mlops/src/train.py
diff --git a/src/utils.py → mlops/src/utils.py b/src/utils.py → mlops/src/utils.py