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Cleanup some dead code #243

Merged
merged 2 commits into from
Nov 29, 2024
Merged

Cleanup some dead code #243

merged 2 commits into from
Nov 29, 2024

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sunxd3
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@sunxd3 sunxd3 commented Nov 29, 2024

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BridgeStan not found at location specified by $BRIDGESTAN environment variable, downloading version 2.5.0 to /home/runner/.bridgestan/bridgestan-2.5.0
Done!
Model dogs produces error: ErrorException("log_density() failed with exception: Exception: bernoulli_lpmf: Probability parameter is inf, but must be in the interval [0, 1] (in '/home/runner/work/JuliaBUGS.jl/JuliaBUGS.jl/benchmark/stan/bugs_examples/vol1/dogs/dogs.stan', line 37, column 6 to line 38, column 62)\n")

Model Parameter Count Data Count Stan Density Time (µs) Stan Density Gradient Time (µs) JuliaBUGS Density Time with Graph Walk (µs) JuliaBUGS Density Gradient Time with ReverseDiff.jl(compiled tape) (µs)
rats 65 150 5.5264 8.20867 66.344 91.992
pumps 12 10 1.00186 1.33957 14.0415 6.32925
dogs 2 720 NA NA 177.592 158.416
seeds 26 21 2.44958 3.07011 29.144 19.256
surgical_realistic 14 12 1.25452 1.61361 15.279 8.663
magnesium 108 96 10.4545 12.0575 123.881 73.567
salm 22 18 2.37108 3.0347 22.101 13.1545
equiv 15 20 2.59482 3.4815 19.767 15.208
dyes 9 30 1.00531 1.34527 12.1975 13.395
stacks 6 21 1.1325 1.66311 17.853 14.928
epil 303 236 32.971 38.402 296.47 245.424
blockers 47 44 3.20367 3.6455 61.565 30.146
oxford 244 240 16.351 19.086 361.962 203.951
lsat 1006 5000 175.948 217.506 2057.62 1251.38
bones 33 422 72.205 90.238 428.031 188.593
mice 20 65 7.35625 9.41767 27.572 38.972
kidney 64 58 10.71 16.17 67.356 76.213
leuk 18 714 20.398 26.74 208.294 196.928
leukfr 40 714 23.955 31.9 227.235 240.956

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Pull Request Test Coverage Report for Build 12081739528

Details

  • 4 of 5 (80.0%) changed or added relevant lines in 1 file are covered.
  • No unchanged relevant lines lost coverage.
  • Overall coverage decreased (-0.02%) to 71.885%

Changes Missing Coverage Covered Lines Changed/Added Lines %
src/model.jl 4 5 80.0%
Totals Coverage Status
Change from base Build 11953015266: -0.02%
Covered Lines: 1396
Relevant Lines: 1942

💛 - Coveralls

@sunxd3 sunxd3 merged commit 1d47fe2 into master Nov 29, 2024
13 checks passed
@sunxd3 sunxd3 deleted the sunxd/cleanup_dead_code branch November 29, 2024 09:31
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2 participants