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Unit testing with codecov #18

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SteveViss opened this issue Dec 6, 2016 · 1 comment
Open

Unit testing with codecov #18

SteveViss opened this issue Dec 6, 2016 · 1 comment
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enhancement

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@SteveViss
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  1. Covering all functions with testthatpackage by (at least) testing the class and structure of the output (@SteveViss or the author can take care of this part, see http://r-pkgs.had.co.nz/tests.html)
  2. Functions should be tested to see if results make sense and/or is accurate (this task will be assignees to the author of the function).
@SteveViss
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Unit testing on as.alienData():

  • Use @ibartomeus data and compare output of the function as.alienData() with the ./data/bartomeus2017.RData

SteveViss added a commit that referenced this issue Feb 17, 2017
@SteveViss
init test on integrity #18
8a9ae03
SteveViss added a commit that referenced this issue Feb 17, 2017
@SteveViss
cover unit tests as.alienData() - issue #18
0d46869
SteveViss added a commit that referenced this issue Feb 17, 2017
@SteveViss
add unit tests to data structure issue #18
2427cf4
SteveViss pushed a commit that referenced this issue Feb 17, 2017
@guiblanchet @SteveViss
Added the as.alienData function with help file written in roxygen2 (#2)
fa9b0a7 
* Added the as.alienData function with help file written in roxygen2

* CamelCase functions

* restore Bartomeus data file in R/

* Fixing issue with weight_sd and weight_mean functions

* removin weight_mean and weigthed_sd, already present in stats - close  #17

* Rebuild package and add new clean target in makefile

* fixinx syntax issues

* code review; fix minor issues/syntax errors

* Set mandatory idObs object in as.alienData() #21

* cleaning up data format

* removing ressourceConsumer matrix

* Details on roxygen documentation

* Add data consistency among interacPair and idObs #21

* set build interac matrix #21

* Add interacSp and interacInd from interacPair

* finish to reference interacSp and interacInd with idObs #21

* check consistency among traitSp and traitInd with idObs #21

* imp. coOcc methods: inferred or not; last checks on out objects; make sure coOcc rownames and colnames reffered to idObs

* make sure siteEnv are referenced in idObs #21

* build doc of as.alienData function

* Push last edits on as.alienData function

* set traitSp and traitInd as long format

* fixing functions errors

* Fixing last issue with res

* building docs; and close #21

* Add data and test it

* Add comments on as.alienData posible enhancements

* set Nacho's comments in issue #12

* set bartomeus in data folder

* init as.alienData test

* init test on integrity #18

* cover unit tests as.alienData() - issue #18

* add unit tests to data structure issue #18
SteveViss added a commit that referenced this issue Feb 17, 2017
@SteveViss
set tests unitaires with fake data instead of bartomeus2017 - issue #18
b1cc16d
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@SteveViss