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skeletonema_resequencing

Files

  • code - Store code used for the project here.
  • data - Directory for raw and filtered data.
  • test - Warious test analyses are performed here.

Data from Alvar

The final gff file is /nobackup/data6/skeletonema_resequencing/genes/04_curated_genes/handmade_gff/Sm_coding_regions_feb_2016.gff (md5: d76a97162bcc823e7fa487e93e34b372) and the reference is /nobackup/data6/skeletonema_resequencing/gene_search/20160323_SNPs_HFMF/LONG/long_fwrev_fixedheaders_c44fix_3discarded_7_mar.fasta (md5: 492ad54800a268fe53a1d16ce5bdbee2).

Data used by Pierre

/nobackup/data6/skeletonema_resequencing/gene_search/Pierre_SNPs (7e566f3518e6f3d1b9e6069608d9fe06) /nobackup/data8/pierre_skeletonema_project/long_fwrev_fixedheaders_c44fix_3discarded_7_mar.fasta (492ad54800a268fe53a1d16ce5bdbee2)