From 1759a41440a6efde4539dd192411eaf2067db219 Mon Sep 17 00:00:00 2001
From: Federica Eduati <f.eduati@tue.nl>
Date: Thu, 14 Nov 2024 17:14:16 +0100
Subject: [PATCH] updated bibliography

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 index.html | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

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@@ -64,7 +64,7 @@ <h3>Predictive biomarkers from functional analysis of static data</h3>
 							<h3>Spatial multicellular models</h3>
 							<p>
 								<ul>
-									<li>Development of computational approaches to quantitatively characterise spatial localization of cell types in the tumor microenvironment using radiogenomics approaches, i.e., combining imaging features and gene expression. Tool: <a href="https://github.com/SysBioOncology/SPoTLIghT">SPoTLIghT</a>. Paper: <a href="https://www.nature.com/articles/s41698-024-00749-w">Lapuente-Santana et al, npj Precision Oncology, 2024</a>.</li>
+									<li>Development of computational approaches to quantitatively characterise spatial localization of cell types in the tumor microenvironment combining imaging modalities (radiomics images, pathology slides) and molecular data. Tool: <a href="https://github.com/SysBioOncology/SPoTLIghT">SPoTLIghT</a>. Paper: <a href="https://www.nature.com/articles/s41698-024-00749-w">Lapuente-Santana et al, npj Precision Oncology, 2024</a>.</li>
 									<li>Development of agent-based models to study how interactions between different cells in the TME coordinate tumour development and response to treatment. Models: <a href="https://github.com/SysBioOncology/ABM_prostate_cancer_development">Prostate cancer development</a>, <a href="https://github.com/SysBioOncology/PCABM_ADT">Prostate cancer androgen deprivation therapy</a>. Papers: <a href="https://aacrjournals.org/cancerrescommun/article/doi/10.1158/2767-9764.CRC-23-0097/727779">Passier et al, Cancer Research Communications, 2023</a>, <a href="https://www.nature.com/articles/s41540-024-00344-6">van Genderen et al, npj Systems Biology and Applications, 2024</a>. See our cover artwork in the <a href="https://mathematical-oncology.org/art/292/">MathOnco newsletter</a>. </li>
 								</ul>
 							</p>
@@ -93,8 +93,8 @@ <h2>Selected publications</h2>
 						Full list of publications can be be found <a href="files/Publication_list_Eduati.pdf">here</a> or in <a href="https://scholar.google.com/citations?user=SAeklM8AAAAJ&hl=en&oi=ao">Google Scholar.</a>
 						</header>
 						<header>
-							<h4><a href="https://www.nature.com/articles/s41698-024-00749-w">Multimodal analysis unveils tumor microenvironment heterogeneity linked to immune activity and evasion</a></h4>
-							<p style="font-size:16px; ">Ó. Lapuente-Santana<sup>$</sup>, J. Kant<sup>$</sup>, F. Eduati. <i>npj Precision Oncology</i>, 2024. (<sup>$</sup> co-first authors, <sup>#</sup> co-last authors)</p>
+							<h4><a href="https://www.nature.com/articles/s41698-024-00749-w">Integrating histopathology and transcriptomics for spatial tumor microenvironment profiling in a melanoma case study</a></h4>
+							<p style="font-size:16px; ">Ó. Lapuente-Santana<sup>$</sup>, J. Kant<sup>$</sup>, F. Eduati. <i>npj Precision Oncology</i>, 2024. (<sup>$</sup> co-first authors)</p>
 							<h4><a href="https://www.cell.com/iscience/fulltext/S2589-0042(24)01754-1">Multimodal analysis unveils tumor microenvironment heterogeneity linked to immune activity and evasion</a></h4>
 							<p style="font-size:16px; ">Ó. Lapuente-Santana<sup>$</sup>, G. Sturm<sup>$</sup>, J. Kant, M. Ausserhofer, C. Zack, M. Zopoglou, N. McGranahan, D. Rieder, Z. Trajanoski, N. F. d C. C. de Miranda, F. Eduati<sup>#</sup>, F. Finotello<sup>#</sup>. <i>iScience</i>, 2024. (<sup>$</sup> co-first authors, <sup>#</sup> co-last authors)</p>
 							<h4><a href="https://www.nature.com/articles/s41540-024-00344-6">Agent-based modeling of the prostate tumor microenvironment uncovers spatial tumor growth constraints and immunomodulatory properties</a></h4>