diff --git a/magik-checks/src/main/java/nl/ramsolutions/sw/magik/checks/CheckList.java b/magik-checks/src/main/java/nl/ramsolutions/sw/magik/checks/CheckList.java
index ed7224cf..34bbd829 100644
--- a/magik-checks/src/main/java/nl/ramsolutions/sw/magik/checks/CheckList.java
+++ b/magik-checks/src/main/java/nl/ramsolutions/sw/magik/checks/CheckList.java
@@ -110,15 +110,4 @@ public static List<Class<? extends MagikCheck>> getChecks() {
       getFixers() {
     return Map.of(FormattingCheck.class, List.of(FormattingFixer.class));
   }
-
-  /**
-   * Get {@link MagikCheck}s which are disabled by default.
-   *
-   * @return List of {@link MagikCheck}s.
-   */
-  public static List<Class<? extends MagikCheck>> getDisabledByDefaultChecks() {
-    return getChecks().stream()
-        .filter(checkClass -> checkClass.getAnnotation(DisabledByDefault.class) != null)
-        .toList();
-  }
 }
diff --git a/magik-checks/src/main/java/nl/ramsolutions/sw/magik/checks/MagikChecksConfiguration.java b/magik-checks/src/main/java/nl/ramsolutions/sw/magik/checks/MagikChecksConfiguration.java
index 7e1c3041..ea20b9c4 100644
--- a/magik-checks/src/main/java/nl/ramsolutions/sw/magik/checks/MagikChecksConfiguration.java
+++ b/magik-checks/src/main/java/nl/ramsolutions/sw/magik/checks/MagikChecksConfiguration.java
@@ -49,9 +49,15 @@ public List<MagikCheckHolder> getAllChecks() {
 
     for (final Class<?> checkClass : this.checkClasses) {
       final String checkKey = MagikChecksConfiguration.checkKey(checkClass);
-      final boolean checkEnabled =
-          enableds.contains(checkKey)
-              || !disableds.contains(checkKey) && !disableds.contains("all");
+      final boolean checkEnabled;
+      if (enableds.contains(checkKey)) {
+        checkEnabled = true;
+      } else if (disableds.contains(checkKey) || disableds.contains("all")) {
+        checkEnabled = false;
+      } else {
+        // No explicit configuration, use default state
+        checkEnabled = checkClass.getAnnotation(DisabledByDefault.class) == null;
+      }
 
       // Gather parameters from MagikCheck, value from config.
       final Set<MagikCheckHolder.Parameter> parameters =
diff --git a/magik-typed-checks/src/main/java/nl/ramsolutions/sw/magik/typedchecks/CheckList.java b/magik-typed-checks/src/main/java/nl/ramsolutions/sw/magik/typedchecks/CheckList.java
index 3e50fbc7..157e6e11 100644
--- a/magik-typed-checks/src/main/java/nl/ramsolutions/sw/magik/typedchecks/CheckList.java
+++ b/magik-typed-checks/src/main/java/nl/ramsolutions/sw/magik/typedchecks/CheckList.java
@@ -2,7 +2,6 @@
 
 import java.util.List;
 import java.util.Map;
-import nl.ramsolutions.sw.magik.checks.DisabledByDefault;
 import nl.ramsolutions.sw.magik.checks.MagikCheck;
 import nl.ramsolutions.sw.magik.checks.checks.TypeDocCheck;
 import nl.ramsolutions.sw.magik.typedchecks.checks.ConditionalExpressionIsFalseTypedCheck;
@@ -58,15 +57,4 @@ public static List<Class<? extends MagikCheck>> getChecks() {
     return Map.of(
         TypeDocCheck.class, List.of(TypeDocParameterFixer.class, TypeDocReturnTypeFixer.class));
   }
-
-  /**
-   * Get {@link MagikCheck}s which are disabled by default.
-   *
-   * @return List of {@link MagikCheck}s.
-   */
-  public static List<Class<? extends MagikCheck>> getDisabledByDefaultChecks() {
-    return getChecks().stream()
-        .filter(checkClass -> checkClass.getAnnotation(DisabledByDefault.class) != null)
-        .toList();
-  }
 }