From de3153179bb385a0a40cec4b2a983fb34da6f3ec Mon Sep 17 00:00:00 2001 From: Alessio Buccino Date: Thu, 4 Jul 2024 17:49:31 +0200 Subject: [PATCH 1/2] analyse -> analyze neuropixels docs --- ...se_neuropixels.rst => analyze_neuropixels.rst} | 14 +++++++------- .../analyze_neuropixels_13_0.png} | Bin .../analyze_neuropixels_14_1.png} | Bin .../analyze_neuropixels_21_1.png} | Bin .../analyze_neuropixels_26_1.png} | Bin .../analyze_neuropixels_27_1.png} | Bin .../analyze_neuropixels_8_1.png} | Bin 7 files changed, 7 insertions(+), 7 deletions(-) rename doc/how_to/{analyse_neuropixels.rst => analyze_neuropixels.rst} (98%) rename doc/how_to/{analyse_neuropixels_files/analyse_neuropixels_13_0.png => analyze_neuropixels_files/analyze_neuropixels_13_0.png} (100%) rename doc/how_to/{analyse_neuropixels_files/analyse_neuropixels_14_1.png => analyze_neuropixels_files/analyze_neuropixels_14_1.png} (100%) rename doc/how_to/{analyse_neuropixels_files/analyse_neuropixels_21_1.png => analyze_neuropixels_files/analyze_neuropixels_21_1.png} (100%) rename doc/how_to/{analyse_neuropixels_files/analyse_neuropixels_26_1.png => analyze_neuropixels_files/analyze_neuropixels_26_1.png} (100%) rename doc/how_to/{analyse_neuropixels_files/analyse_neuropixels_27_1.png => analyze_neuropixels_files/analyze_neuropixels_27_1.png} (100%) rename doc/how_to/{analyse_neuropixels_files/analyse_neuropixels_8_1.png => analyze_neuropixels_files/analyze_neuropixels_8_1.png} (100%) diff --git a/doc/how_to/analyse_neuropixels.rst b/doc/how_to/analyze_neuropixels.rst similarity index 98% rename from doc/how_to/analyse_neuropixels.rst rename to doc/how_to/analyze_neuropixels.rst index 02e497b0fe..1fe741ea48 100644 --- a/doc/how_to/analyse_neuropixels.rst +++ b/doc/how_to/analyze_neuropixels.rst @@ -1,4 +1,4 @@ -Analyse Neuropixels datasets +Analyze Neuropixels datasets ============================ This example shows how to perform Neuropixels-specific analysis, @@ -218,7 +218,7 @@ We need to specify which one to read: -.. image:: analyse_neuropixels_files/analyse_neuropixels_8_1.png +.. image:: analyze_neuropixels_files/analyze_neuropixels_8_1.png Preprocess the recording @@ -286,7 +286,7 @@ is lazy, so you can change the previsous cell (parameters, step order, -.. image:: analyse_neuropixels_files/analyse_neuropixels_13_0.png +.. image:: analyze_neuropixels_files/analyze_neuropixels_13_0.png .. code:: ipython3 @@ -306,7 +306,7 @@ is lazy, so you can change the previsous cell (parameters, step order, -.. image:: analyse_neuropixels_files/analyse_neuropixels_14_1.png +.. image:: analyze_neuropixels_files/analyze_neuropixels_14_1.png Should we save the preprocessed data to a binary file? @@ -389,7 +389,7 @@ Noise levels can be estimated on the scaled traces or on the raw -.. image:: analyse_neuropixels_files/analyse_neuropixels_21_1.png +.. image:: analyze_neuropixels_files/analyze_neuropixels_21_1.png Detect and localize peaks @@ -480,7 +480,7 @@ documentation for motion estimation and correction for more details. -.. image:: analyse_neuropixels_files/analyse_neuropixels_26_1.png +.. image:: analyze_neuropixels_files/analyze_neuropixels_26_1.png .. code:: ipython3 @@ -502,7 +502,7 @@ documentation for motion estimation and correction for more details. -.. image:: analyse_neuropixels_files/analyse_neuropixels_27_1.png +.. image:: analyze_neuropixels_files/analyze_neuropixels_27_1.png Run a spike sorter diff --git a/doc/how_to/analyse_neuropixels_files/analyse_neuropixels_13_0.png b/doc/how_to/analyze_neuropixels_files/analyze_neuropixels_13_0.png similarity index 100% rename from doc/how_to/analyse_neuropixels_files/analyse_neuropixels_13_0.png rename to doc/how_to/analyze_neuropixels_files/analyze_neuropixels_13_0.png diff --git a/doc/how_to/analyse_neuropixels_files/analyse_neuropixels_14_1.png b/doc/how_to/analyze_neuropixels_files/analyze_neuropixels_14_1.png similarity index 100% rename from doc/how_to/analyse_neuropixels_files/analyse_neuropixels_14_1.png rename to doc/how_to/analyze_neuropixels_files/analyze_neuropixels_14_1.png diff --git a/doc/how_to/analyse_neuropixels_files/analyse_neuropixels_21_1.png b/doc/how_to/analyze_neuropixels_files/analyze_neuropixels_21_1.png similarity index 100% rename from doc/how_to/analyse_neuropixels_files/analyse_neuropixels_21_1.png rename to doc/how_to/analyze_neuropixels_files/analyze_neuropixels_21_1.png diff --git a/doc/how_to/analyse_neuropixels_files/analyse_neuropixels_26_1.png b/doc/how_to/analyze_neuropixels_files/analyze_neuropixels_26_1.png similarity index 100% rename from doc/how_to/analyse_neuropixels_files/analyse_neuropixels_26_1.png rename to doc/how_to/analyze_neuropixels_files/analyze_neuropixels_26_1.png diff --git a/doc/how_to/analyse_neuropixels_files/analyse_neuropixels_27_1.png b/doc/how_to/analyze_neuropixels_files/analyze_neuropixels_27_1.png similarity index 100% rename from doc/how_to/analyse_neuropixels_files/analyse_neuropixels_27_1.png rename to doc/how_to/analyze_neuropixels_files/analyze_neuropixels_27_1.png diff --git a/doc/how_to/analyse_neuropixels_files/analyse_neuropixels_8_1.png b/doc/how_to/analyze_neuropixels_files/analyze_neuropixels_8_1.png similarity index 100% rename from doc/how_to/analyse_neuropixels_files/analyse_neuropixels_8_1.png rename to doc/how_to/analyze_neuropixels_files/analyze_neuropixels_8_1.png From 6f462505ea7c6ec6d6e0f2a7bd4051fe554c097a Mon Sep 17 00:00:00 2001 From: Alessio Buccino Date: Thu, 4 Jul 2024 17:54:53 +0200 Subject: [PATCH 2/2] and index.rst --- doc/how_to/index.rst | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/doc/how_to/index.rst b/doc/how_to/index.rst index 66dd9b417c..7127c4faf0 100644 --- a/doc/how_to/index.rst +++ b/doc/how_to/index.rst @@ -8,7 +8,7 @@ Guides on how to solve specific, short problems in SpikeInterface. Learn how to. viewers handle_drift - analyse_neuropixels + analyze_neuropixels load_matlab_data combine_recordings process_by_channel_group