From 9db56868478376525c5dc0758d39ad5916e1095a Mon Sep 17 00:00:00 2001
From: Liam Moore <lmoore90@gmail.com>
Date: Sat, 18 Nov 2023 13:20:04 +0100
Subject: [PATCH] fix some failing tests for apply with nested markdown

---
 poetry.lock           | 2424 ++++++++++++++++++++++++++++++++++++++---
 pyproject.toml        |    2 +
 slopify/applier.py    |  178 ++-
 tests/test_applier.py |  107 +-
 4 files changed, 2544 insertions(+), 167 deletions(-)

diff --git a/poetry.lock b/poetry.lock
index 88dbe8d..c80a6d7 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,5 +1,156 @@
 # This file is automatically @generated by Poetry 1.5.1 and should not be changed by hand.
 
+[[package]]
+name = "annotated-types"
+version = "0.6.0"
+description = "Reusable constraint types to use with typing.Annotated"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "annotated_types-0.6.0-py3-none-any.whl", hash = "sha256:0641064de18ba7a25dee8f96403ebc39113d0cb953a01429249d5c7564666a43"},
+    {file = "annotated_types-0.6.0.tar.gz", hash = "sha256:563339e807e53ffd9c267e99fc6d9ea23eb8443c08f112651963e24e22f84a5d"},
+]
+
+[[package]]
+name = "anyio"
+version = "4.0.0"
+description = "High level compatibility layer for multiple asynchronous event loop implementations"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "anyio-4.0.0-py3-none-any.whl", hash = "sha256:cfdb2b588b9fc25ede96d8db56ed50848b0b649dca3dd1df0b11f683bb9e0b5f"},
+    {file = "anyio-4.0.0.tar.gz", hash = "sha256:f7ed51751b2c2add651e5747c891b47e26d2a21be5d32d9311dfe9692f3e5d7a"},
+]
+
+[package.dependencies]
+exceptiongroup = {version = ">=1.0.2", markers = "python_version < \"3.11\""}
+idna = ">=2.8"
+sniffio = ">=1.1"
+
+[package.extras]
+doc = ["Sphinx (>=7)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)"]
+test = ["anyio[trio]", "coverage[toml] (>=7)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "uvloop (>=0.17)"]
+trio = ["trio (>=0.22)"]
+
+[[package]]
+name = "appnope"
+version = "0.1.3"
+description = "Disable App Nap on macOS >= 10.9"
+optional = false
+python-versions = "*"
+files = [
+    {file = "appnope-0.1.3-py2.py3-none-any.whl", hash = "sha256:265a455292d0bd8a72453494fa24df5a11eb18373a60c7c0430889f22548605e"},
+    {file = "appnope-0.1.3.tar.gz", hash = "sha256:02bd91c4de869fbb1e1c50aafc4098827a7a54ab2f39d9dcba6c9547ed920e24"},
+]
+
+[[package]]
+name = "argon2-cffi"
+version = "23.1.0"
+description = "Argon2 for Python"
+optional = false
+python-versions = ">=3.7"
+files = [
+    {file = "argon2_cffi-23.1.0-py3-none-any.whl", hash = "sha256:c670642b78ba29641818ab2e68bd4e6a78ba53b7eff7b4c3815ae16abf91c7ea"},
+    {file = "argon2_cffi-23.1.0.tar.gz", hash = "sha256:879c3e79a2729ce768ebb7d36d4609e3a78a4ca2ec3a9f12286ca057e3d0db08"},
+]
+
+[package.dependencies]
+argon2-cffi-bindings = "*"
+
+[package.extras]
+dev = ["argon2-cffi[tests,typing]", "tox (>4)"]
+docs = ["furo", "myst-parser", "sphinx", "sphinx-copybutton", "sphinx-notfound-page"]
+tests = ["hypothesis", "pytest"]
+typing = ["mypy"]
+
+[[package]]
+name = "argon2-cffi-bindings"
+version = "21.2.0"
+description = "Low-level CFFI bindings for Argon2"
+optional = false
+python-versions = ">=3.6"
+files = [
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+]
+
+[package.dependencies]
+cffi = ">=1.0.1"
+
+[package.extras]
+dev = ["cogapp", "pre-commit", "pytest", "wheel"]
+tests = ["pytest"]
+
+[[package]]
+name = "arrow"
+version = "1.3.0"
+description = "Better dates & times for Python"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "arrow-1.3.0-py3-none-any.whl", hash = "sha256:c728b120ebc00eb84e01882a6f5e7927a53960aa990ce7dd2b10f39005a67f80"},
+    {file = "arrow-1.3.0.tar.gz", hash = "sha256:d4540617648cb5f895730f1ad8c82a65f2dad0166f57b75f3ca54759c4d67a85"},
+]
+
+[package.dependencies]
+python-dateutil = ">=2.7.0"
+types-python-dateutil = ">=2.8.10"
+
+[package.extras]
+doc = ["doc8", "sphinx (>=7.0.0)", "sphinx-autobuild", "sphinx-autodoc-typehints", "sphinx_rtd_theme (>=1.3.0)"]
+test = ["dateparser (==1.*)", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytz (==2021.1)", "simplejson (==3.*)"]
+
+[[package]]
+name = "asttokens"
+version = "2.4.1"
+description = "Annotate AST trees with source code positions"
+optional = false
+python-versions = "*"
+files = [
+    {file = "asttokens-2.4.1-py2.py3-none-any.whl", hash = "sha256:051ed49c3dcae8913ea7cd08e46a606dba30b79993209636c4875bc1d637bc24"},
+    {file = "asttokens-2.4.1.tar.gz", hash = "sha256:b03869718ba9a6eb027e134bfdf69f38a236d681c83c160d510768af11254ba0"},
+]
+
+[package.dependencies]
+six = ">=1.12.0"
+
+[package.extras]
+astroid = ["astroid (>=1,<2)", "astroid (>=2,<4)"]
+test = ["astroid (>=1,<2)", "astroid (>=2,<4)", "pytest"]
+
+[[package]]
+name = "async-lru"
+version = "2.0.4"
+description = "Simple LRU cache for asyncio"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "async-lru-2.0.4.tar.gz", hash = "sha256:b8a59a5df60805ff63220b2a0c5b5393da5521b113cd5465a44eb037d81a5627"},
+    {file = "async_lru-2.0.4-py3-none-any.whl", hash = "sha256:ff02944ce3c288c5be660c42dbcca0742b32c3b279d6dceda655190240b99224"},
+]
+
+[package.dependencies]
+typing-extensions = {version = ">=4.0.0", markers = "python_version < \"3.11\""}
+
 [[package]]
 name = "atomicwrites"
 version = "1.4.1"
@@ -28,6 +179,41 @@ docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-
 tests = ["attrs[tests-no-zope]", "zope-interface"]
 tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
 
+[[package]]
+name = "babel"
+version = "2.13.1"
+description = "Internationalization utilities"
+optional = false
+python-versions = ">=3.7"
+files = [
+    {file = "Babel-2.13.1-py3-none-any.whl", hash = "sha256:7077a4984b02b6727ac10f1f7294484f737443d7e2e66c5e4380e41a3ae0b4ed"},
+    {file = "Babel-2.13.1.tar.gz", hash = "sha256:33e0952d7dd6374af8dbf6768cc4ddf3ccfefc244f9986d4074704f2fbd18900"},
+]
+
+[package.dependencies]
+setuptools = {version = "*", markers = "python_version >= \"3.12\""}
+
+[package.extras]
+dev = ["freezegun (>=1.0,<2.0)", "pytest (>=6.0)", "pytest-cov"]
+
+[[package]]
+name = "beautifulsoup4"
+version = "4.12.2"
+description = "Screen-scraping library"
+optional = false
+python-versions = ">=3.6.0"
+files = [
+    {file = "beautifulsoup4-4.12.2-py3-none-any.whl", hash = "sha256:bd2520ca0d9d7d12694a53d44ac482d181b4ec1888909b035a3dbf40d0f57d4a"},
+    {file = "beautifulsoup4-4.12.2.tar.gz", hash = "sha256:492bbc69dca35d12daac71c4db1bfff0c876c00ef4a2ffacce226d4638eb72da"},
+]
+
+[package.dependencies]
+soupsieve = ">1.2"
+
+[package.extras]
+html5lib = ["html5lib"]
+lxml = ["lxml"]
+
 [[package]]
 name = "black"
 version = "23.11.0"
@@ -70,6 +256,198 @@ d = ["aiohttp (>=3.7.4)"]
 jupyter = ["ipython (>=7.8.0)", "tokenize-rt (>=3.2.0)"]
 uvloop = ["uvloop (>=0.15.2)"]
 
+[[package]]
+name = "bleach"
+version = "6.1.0"
+description = "An easy safelist-based HTML-sanitizing tool."
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "bleach-6.1.0-py3-none-any.whl", hash = "sha256:3225f354cfc436b9789c66c4ee030194bee0568fbf9cbdad3bc8b5c26c5f12b6"},
+    {file = "bleach-6.1.0.tar.gz", hash = "sha256:0a31f1837963c41d46bbf1331b8778e1308ea0791db03cc4e7357b97cf42a8fe"},
+]
+
+[package.dependencies]
+six = ">=1.9.0"
+webencodings = "*"
+
+[package.extras]
+css = ["tinycss2 (>=1.1.0,<1.3)"]
+
+[[package]]
+name = "certifi"
+version = "2023.7.22"
+description = "Python package for providing Mozilla's CA Bundle."
+optional = false
+python-versions = ">=3.6"
+files = [
+    {file = "certifi-2023.7.22-py3-none-any.whl", hash = "sha256:92d6037539857d8206b8f6ae472e8b77db8058fec5937a1ef3f54304089edbb9"},
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+]
+
+[[package]]
+name = "cffi"
+version = "1.16.0"
+description = "Foreign Function Interface for Python calling C code."
+optional = false
+python-versions = ">=3.8"
+files = [
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 version = "8.1.7"
@@ -96,188 +474,1293 @@ files = [
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-
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-reports = ["lxml"]
-
 [[package]]
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 optional = false
 python-versions = ">=3.5"
 files = [
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@@ -322,6 +2233,129 @@ files = [
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 ]
 
+[[package]]
+name = "send2trash"
+version = "1.8.2"
+description = "Send file to trash natively under Mac OS X, Windows and Linux"
+optional = false
+python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7"
+files = [
+    {file = "Send2Trash-1.8.2-py3-none-any.whl", hash = "sha256:a384719d99c07ce1eefd6905d2decb6f8b7ed054025bb0e618919f945de4f679"},
+    {file = "Send2Trash-1.8.2.tar.gz", hash = "sha256:c132d59fa44b9ca2b1699af5c86f57ce9f4c5eb56629d5d55fbb7a35f84e2312"},
+]
+
+[package.extras]
+nativelib = ["pyobjc-framework-Cocoa", "pywin32"]
+objc = ["pyobjc-framework-Cocoa"]
+win32 = ["pywin32"]
+
+[[package]]
+name = "setuptools"
+version = "68.2.2"
+description = "Easily download, build, install, upgrade, and uninstall Python packages"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "setuptools-68.2.2-py3-none-any.whl", hash = "sha256:b454a35605876da60632df1a60f736524eb73cc47bbc9f3f1ef1b644de74fd2a"},
+    {file = "setuptools-68.2.2.tar.gz", hash = "sha256:4ac1475276d2f1c48684874089fefcd83bd7162ddaafb81fac866ba0db282a87"},
+]
+
+[package.extras]
+docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "pygments-github-lexers (==0.0.5)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-favicon", "sphinx-hoverxref (<2)", "sphinx-inline-tabs", "sphinx-lint", "sphinx-notfound-page (>=1,<2)", "sphinx-reredirects", "sphinxcontrib-towncrier"]
+testing = ["build[virtualenv]", "filelock (>=3.4.0)", "flake8-2020", "ini2toml[lite] (>=0.9)", "jaraco.develop (>=7.21)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "pip (>=19.1)", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-mypy (>=0.9.1)", "pytest-perf", "pytest-ruff", "pytest-timeout", "pytest-xdist", "tomli-w (>=1.0.0)", "virtualenv (>=13.0.0)", "wheel"]
+testing-integration = ["build[virtualenv] (>=1.0.3)", "filelock (>=3.4.0)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "packaging (>=23.1)", "pytest", "pytest-enabler", "pytest-xdist", "tomli", "virtualenv (>=13.0.0)", "wheel"]
+
+[[package]]
+name = "six"
+version = "1.16.0"
+description = "Python 2 and 3 compatibility utilities"
+optional = false
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*"
+files = [
+    {file = "six-1.16.0-py2.py3-none-any.whl", hash = "sha256:8abb2f1d86890a2dfb989f9a77cfcfd3e47c2a354b01111771326f8aa26e0254"},
+    {file = "six-1.16.0.tar.gz", hash = "sha256:1e61c37477a1626458e36f7b1d82aa5c9b094fa4802892072e49de9c60c4c926"},
+]
+
+[[package]]
+name = "sniffio"
+version = "1.3.0"
+description = "Sniff out which async library your code is running under"
+optional = false
+python-versions = ">=3.7"
+files = [
+    {file = "sniffio-1.3.0-py3-none-any.whl", hash = "sha256:eecefdce1e5bbfb7ad2eeaabf7c1eeb404d7757c379bd1f7e5cce9d8bf425384"},
+    {file = "sniffio-1.3.0.tar.gz", hash = "sha256:e60305c5e5d314f5389259b7f22aaa33d8f7dee49763119234af3755c55b9101"},
+]
+
+[[package]]
+name = "soupsieve"
+version = "2.5"
+description = "A modern CSS selector implementation for Beautiful Soup."
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "soupsieve-2.5-py3-none-any.whl", hash = "sha256:eaa337ff55a1579b6549dc679565eac1e3d000563bcb1c8ab0d0fefbc0c2cdc7"},
+    {file = "soupsieve-2.5.tar.gz", hash = "sha256:5663d5a7b3bfaeee0bc4372e7fc48f9cff4940b3eec54a6451cc5299f1097690"},
+]
+
+[[package]]
+name = "stack-data"
+version = "0.6.3"
+description = "Extract data from python stack frames and tracebacks for informative displays"
+optional = false
+python-versions = "*"
+files = [
+    {file = "stack_data-0.6.3-py3-none-any.whl", hash = "sha256:d5558e0c25a4cb0853cddad3d77da9891a08cb85dd9f9f91b9f8cd66e511e695"},
+    {file = "stack_data-0.6.3.tar.gz", hash = "sha256:836a778de4fec4dcd1dcd89ed8abff8a221f58308462e1c4aa2a3cf30148f0b9"},
+]
+
+[package.dependencies]
+asttokens = ">=2.1.0"
+executing = ">=1.2.0"
+pure-eval = "*"
+
+[package.extras]
+tests = ["cython", "littleutils", "pygments", "pytest", "typeguard"]
+
+[[package]]
+name = "terminado"
+version = "0.18.0"
+description = "Tornado websocket backend for the Xterm.js Javascript terminal emulator library."
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "terminado-0.18.0-py3-none-any.whl", hash = "sha256:87b0d96642d0fe5f5abd7783857b9cab167f221a39ff98e3b9619a788a3c0f2e"},
+    {file = "terminado-0.18.0.tar.gz", hash = "sha256:1ea08a89b835dd1b8c0c900d92848147cef2537243361b2e3f4dc15df9b6fded"},
+]
+
+[package.dependencies]
+ptyprocess = {version = "*", markers = "os_name != \"nt\""}
+pywinpty = {version = ">=1.1.0", markers = "os_name == \"nt\""}
+tornado = ">=6.1.0"
+
+[package.extras]
+docs = ["myst-parser", "pydata-sphinx-theme", "sphinx"]
+test = ["pre-commit", "pytest (>=7.0)", "pytest-timeout"]
+typing = ["mypy (>=1.6,<2.0)", "traitlets (>=5.11.1)"]
+
+[[package]]
+name = "tinycss2"
+version = "1.2.1"
+description = "A tiny CSS parser"
+optional = false
+python-versions = ">=3.7"
+files = [
+    {file = "tinycss2-1.2.1-py3-none-any.whl", hash = "sha256:2b80a96d41e7c3914b8cda8bc7f705a4d9c49275616e886103dd839dfc847847"},
+    {file = "tinycss2-1.2.1.tar.gz", hash = "sha256:8cff3a8f066c2ec677c06dbc7b45619804a6938478d9d73c284b29d14ecb0627"},
+]
+
+[package.dependencies]
+webencodings = ">=0.4"
+
+[package.extras]
+doc = ["sphinx", "sphinx_rtd_theme"]
+test = ["flake8", "isort", "pytest"]
+
 [[package]]
 name = "toml"
 version = "0.10.2"
@@ -344,6 +2378,41 @@ files = [
     {file = "tomli-2.0.1.tar.gz", hash = "sha256:de526c12914f0c550d15924c62d72abc48d6fe7364aa87328337a31007fe8a4f"},
 ]
 
+[[package]]
+name = "tornado"
+version = "6.3.3"
+description = "Tornado is a Python web framework and asynchronous networking library, originally developed at FriendFeed."
+optional = false
+python-versions = ">= 3.8"
+files = [
+    {file = "tornado-6.3.3-cp38-abi3-macosx_10_9_universal2.whl", hash = "sha256:502fba735c84450974fec147340016ad928d29f1e91f49be168c0a4c18181e1d"},
+    {file = "tornado-6.3.3-cp38-abi3-macosx_10_9_x86_64.whl", hash = "sha256:805d507b1f588320c26f7f097108eb4023bbaa984d63176d1652e184ba24270a"},
+    {file = "tornado-6.3.3-cp38-abi3-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:1bd19ca6c16882e4d37368e0152f99c099bad93e0950ce55e71daed74045908f"},
+    {file = "tornado-6.3.3-cp38-abi3-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:7ac51f42808cca9b3613f51ffe2a965c8525cb1b00b7b2d56828b8045354f76a"},
+    {file = "tornado-6.3.3-cp38-abi3-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:71a8db65160a3c55d61839b7302a9a400074c9c753040455494e2af74e2501f2"},
+    {file = "tornado-6.3.3-cp38-abi3-musllinux_1_1_aarch64.whl", hash = "sha256:ceb917a50cd35882b57600709dd5421a418c29ddc852da8bcdab1f0db33406b0"},
+    {file = "tornado-6.3.3-cp38-abi3-musllinux_1_1_i686.whl", hash = "sha256:7d01abc57ea0dbb51ddfed477dfe22719d376119844e33c661d873bf9c0e4a16"},
+    {file = "tornado-6.3.3-cp38-abi3-musllinux_1_1_x86_64.whl", hash = "sha256:9dc4444c0defcd3929d5c1eb5706cbe1b116e762ff3e0deca8b715d14bf6ec17"},
+    {file = "tornado-6.3.3-cp38-abi3-win32.whl", hash = "sha256:65ceca9500383fbdf33a98c0087cb975b2ef3bfb874cb35b8de8740cf7f41bd3"},
+    {file = "tornado-6.3.3-cp38-abi3-win_amd64.whl", hash = "sha256:22d3c2fa10b5793da13c807e6fc38ff49a4f6e1e3868b0a6f4164768bb8e20f5"},
+    {file = "tornado-6.3.3.tar.gz", hash = "sha256:e7d8db41c0181c80d76c982aacc442c0783a2c54d6400fe028954201a2e032fe"},
+]
+
+[[package]]
+name = "traitlets"
+version = "5.13.0"
+description = "Traitlets Python configuration system"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "traitlets-5.13.0-py3-none-any.whl", hash = "sha256:baf991e61542da48fe8aef8b779a9ea0aa38d8a54166ee250d5af5ecf4486619"},
+    {file = "traitlets-5.13.0.tar.gz", hash = "sha256:9b232b9430c8f57288c1024b34a8f0251ddcc47268927367a0dd3eeaca40deb5"},
+]
+
+[package.extras]
+docs = ["myst-parser", "pydata-sphinx-theme", "sphinx"]
+test = ["argcomplete (>=3.0.3)", "mypy (>=1.6.0)", "pre-commit", "pytest (>=7.0,<7.5)", "pytest-mock", "pytest-mypy-testing"]
+
 [[package]]
 name = "typer"
 version = "0.9.0"
@@ -365,6 +2434,17 @@ dev = ["autoflake (>=1.3.1,<2.0.0)", "flake8 (>=3.8.3,<4.0.0)", "pre-commit (>=2
 doc = ["cairosvg (>=2.5.2,<3.0.0)", "mdx-include (>=1.4.1,<2.0.0)", "mkdocs (>=1.1.2,<2.0.0)", "mkdocs-material (>=8.1.4,<9.0.0)", "pillow (>=9.3.0,<10.0.0)"]
 test = ["black (>=22.3.0,<23.0.0)", "coverage (>=6.2,<7.0)", "isort (>=5.0.6,<6.0.0)", "mypy (==0.910)", "pytest (>=4.4.0,<8.0.0)", "pytest-cov (>=2.10.0,<5.0.0)", "pytest-sugar (>=0.9.4,<0.10.0)", "pytest-xdist (>=1.32.0,<4.0.0)", "rich (>=10.11.0,<14.0.0)", "shellingham (>=1.3.0,<2.0.0)"]
 
+[[package]]
+name = "types-python-dateutil"
+version = "2.8.19.14"
+description = "Typing stubs for python-dateutil"
+optional = false
+python-versions = "*"
+files = [
+    {file = "types-python-dateutil-2.8.19.14.tar.gz", hash = "sha256:1f4f10ac98bb8b16ade9dbee3518d9ace017821d94b057a425b069f834737f4b"},
+    {file = "types_python_dateutil-2.8.19.14-py3-none-any.whl", hash = "sha256:f977b8de27787639986b4e28963263fd0e5158942b3ecef91b9335c130cb1ce9"},
+]
+
 [[package]]
 name = "typing-extensions"
 version = "4.8.0"
@@ -376,7 +2456,101 @@ files = [
     {file = "typing_extensions-4.8.0.tar.gz", hash = "sha256:df8e4339e9cb77357558cbdbceca33c303714cf861d1eef15e1070055ae8b7ef"},
 ]
 
+[[package]]
+name = "uri-template"
+version = "1.3.0"
+description = "RFC 6570 URI Template Processor"
+optional = false
+python-versions = ">=3.7"
+files = [
+    {file = "uri-template-1.3.0.tar.gz", hash = "sha256:0e00f8eb65e18c7de20d595a14336e9f337ead580c70934141624b6d1ffdacc7"},
+    {file = "uri_template-1.3.0-py3-none-any.whl", hash = "sha256:a44a133ea12d44a0c0f06d7d42a52d71282e77e2f937d8abd5655b8d56fc1363"},
+]
+
+[package.extras]
+dev = ["flake8", "flake8-annotations", "flake8-bandit", "flake8-bugbear", "flake8-commas", "flake8-comprehensions", "flake8-continuation", "flake8-datetimez", "flake8-docstrings", "flake8-import-order", "flake8-literal", "flake8-modern-annotations", "flake8-noqa", "flake8-pyproject", "flake8-requirements", "flake8-typechecking-import", "flake8-use-fstring", "mypy", "pep8-naming", "types-PyYAML"]
+
+[[package]]
+name = "urllib3"
+version = "2.1.0"
+description = "HTTP library with thread-safe connection pooling, file post, and more."
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "urllib3-2.1.0-py3-none-any.whl", hash = "sha256:55901e917a5896a349ff771be919f8bd99aff50b79fe58fec595eb37bbc56bb3"},
+    {file = "urllib3-2.1.0.tar.gz", hash = "sha256:df7aa8afb0148fa78488e7899b2c59b5f4ffcfa82e6c54ccb9dd37c1d7b52d54"},
+]
+
+[package.extras]
+brotli = ["brotli (>=1.0.9)", "brotlicffi (>=0.8.0)"]
+socks = ["pysocks (>=1.5.6,!=1.5.7,<2.0)"]
+zstd = ["zstandard (>=0.18.0)"]
+
+[[package]]
+name = "wcwidth"
+version = "0.2.10"
+description = "Measures the displayed width of unicode strings in a terminal"
+optional = false
+python-versions = "*"
+files = [
+    {file = "wcwidth-0.2.10-py2.py3-none-any.whl", hash = "sha256:aec5179002dd0f0d40c456026e74a729661c9d468e1ed64405e3a6c2176ca36f"},
+    {file = "wcwidth-0.2.10.tar.gz", hash = "sha256:390c7454101092a6a5e43baad8f83de615463af459201709556b6e4b1c861f97"},
+]
+
+[[package]]
+name = "webcolors"
+version = "1.13"
+description = "A library for working with the color formats defined by HTML and CSS."
+optional = false
+python-versions = ">=3.7"
+files = [
+    {file = "webcolors-1.13-py3-none-any.whl", hash = "sha256:29bc7e8752c0a1bd4a1f03c14d6e6a72e93d82193738fa860cbff59d0fcc11bf"},
+    {file = "webcolors-1.13.tar.gz", hash = "sha256:c225b674c83fa923be93d235330ce0300373d02885cef23238813b0d5668304a"},
+]
+
+[package.extras]
+docs = ["furo", "sphinx", "sphinx-copybutton", "sphinx-inline-tabs", "sphinx-notfound-page", "sphinxext-opengraph"]
+tests = ["pytest", "pytest-cov"]
+
+[[package]]
+name = "webencodings"
+version = "0.5.1"
+description = "Character encoding aliases for legacy web content"
+optional = false
+python-versions = "*"
+files = [
+    {file = "webencodings-0.5.1-py2.py3-none-any.whl", hash = "sha256:a0af1213f3c2226497a97e2b3aa01a7e4bee4f403f95be16fc9acd2947514a78"},
+    {file = "webencodings-0.5.1.tar.gz", hash = "sha256:b36a1c245f2d304965eb4e0a82848379241dc04b865afcc4aab16748587e1923"},
+]
+
+[[package]]
+name = "websocket-client"
+version = "1.6.4"
+description = "WebSocket client for Python with low level API options"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "websocket-client-1.6.4.tar.gz", hash = "sha256:b3324019b3c28572086c4a319f91d1dcd44e6e11cd340232978c684a7650d0df"},
+    {file = "websocket_client-1.6.4-py3-none-any.whl", hash = "sha256:084072e0a7f5f347ef2ac3d8698a5e0b4ffbfcab607628cadabc650fc9a83a24"},
+]
+
+[package.extras]
+docs = ["Sphinx (>=6.0)", "sphinx-rtd-theme (>=1.1.0)"]
+optional = ["python-socks", "wsaccel"]
+test = ["websockets"]
+
+[[package]]
+name = "widgetsnbextension"
+version = "4.0.9"
+description = "Jupyter interactive widgets for Jupyter Notebook"
+optional = false
+python-versions = ">=3.7"
+files = [
+    {file = "widgetsnbextension-4.0.9-py3-none-any.whl", hash = "sha256:91452ca8445beb805792f206e560c1769284267a30ceb1cec9f5bcc887d15175"},
+    {file = "widgetsnbextension-4.0.9.tar.gz", hash = "sha256:3c1f5e46dc1166dfd40a42d685e6a51396fd34ff878742a3e47c6f0cc4a2a385"},
+]
+
 [metadata]
 lock-version = "2.0"
 python-versions = "^3.10"
-content-hash = "cd2f3d5e0dbd423fc6e4acee0fd4ae149ad63065a7a3e26528197bbd55e9d856"
+content-hash = "137dd4c3638b551bb880aa7bba2dc037a73309cd6470d30adc4a282370aac823"
diff --git a/pyproject.toml b/pyproject.toml
index f05e415..553b588 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -14,6 +14,8 @@ pyperclip = "^1.8.2"
 mypy = "^1.7.0"
 black = "^23.11.0"
 ruff = "^0.1.5"
+jupyter = "^1.0.0"
+pydantic = "^2.5.1"
 
 [tool.poetry.dev-dependencies]
 pytest = "^6.2.4"
diff --git a/slopify/applier.py b/slopify/applier.py
index 47ba591..058ae88 100644
--- a/slopify/applier.py
+++ b/slopify/applier.py
@@ -1,61 +1,157 @@
 import typing as ty
 import argparse
+from pydantic import BaseModel
 from markdown_it import MarkdownIt
+from markdown_it.token import Token
 from pathlib import Path
 
 
 def unescape_code_blocks(content: str) -> str:
     """
-    Unescape code blocks by removing the unique HTML comments.
+    Unescapes escaped code blocks within Markdown content.
+
+    This function is used to handle the special case where code blocks within
+    Markdown files have been escaped to prevent conflicts with the Markdown syntax.
+
+    Args:
+        content (str): The Markdown content with potentially escaped code blocks.
+
+    Returns:
+        str: The Markdown content with code blocks unescaped.
     """
     return content.replace("<!--SLOPIFY_CODE_BLOCK```-->", "```")
 
 
+# def apply_markdown(markdown_content: str, base_path: ty.Optional[Path] = None):
+#     """
+#     Writes a set of files serialised as slopify markdown back to the file system.
+
+#     For every type of included file except markdown files, this just writes the code 
+#     blocks, which by construction represent the file content.
+
+#     For markdown files themselves (for example, README.md, CONTRIBUTING.md) which 
+#     are serialised inside slopify markdown, we have to deal with the case where 
+#     markdown content (represented by a markdown code block) must be written back 
+#     to a markdown file. This markdown code block may itself include
+#     code blocks which have been escaped by slopify upon serialisation. The full 
+#     contents of this markdown code block must be written back to a markdown file 
+#     with the code blocks unescaped.
+#     """
+#     md = MarkdownIt()
+#     tokens = md.parse(markdown_content)
+
+class FileContent(BaseModel):
+    """
+    A simple data structure to hold the path and content for a file.
+
+    Attributes:
+        path (Path): The path where the file should be written.
+        content (str): The content to be written to the file.
+    """
+    path: Path
+    content: str
+
+def parse_markdown(tokens: list[Token], base_path: Path) -> list[FileContent]:
+    """
+    Parses a list of Markdown tokens and extracts the file paths and contents.
+
+    This function assumes that each file's content is represented as a code block
+    immediately following an H1 heading with the file's relative path. 
+    For Markdown files, all content between file headers is included. It also
+    handles the special case of Markdown files that may contain nested code blocks,
+    which need to be unescaped before writing back to the file system.
+
+    Args:
+        tokens (list[Token]): A list of tokens obtained from parsing Markdown content.
+        base_path (Path): The base path relative to which file paths will be resolved.
+
+    Returns:
+        list[FileContent]: A list of FileContent objects with extracted paths and contents.
+    """
+    file_contents = []
+    current_path = None
+    current_content_lines = []
+    capture_markdown_content = False  # Flag to capture all content for Markdown files
+
+    for token in tokens:
+        if token.type == 'heading_open' and token.tag == 'h1':
+            # If we already have a path and content, save them before starting a new file
+            if current_path is not None:
+                content = '\n'.join(current_content_lines)
+                file_contents.append(FileContent(path=current_path, content=content))
+            current_path = None
+            current_content_lines = []
+            capture_markdown_content = False  # Reset the flag
+        elif token.type == 'inline' and current_path is None:
+            # Extract the file path from the inline token's content
+            current_path = base_path / token.content.strip('`')
+            # Check if the current file is a Markdown file
+            capture_markdown_content = current_path.suffix == '.md'
+        elif capture_markdown_content:
+            # Capture all content for Markdown files
+            if token.type == 'fence':
+                # For code blocks, capture the content including the backticks and language info
+                current_content_lines.append(unescape_code_blocks(token.content))#f"```{token.info}\n{token.content}```")
+            else:
+                # For non-code block content, capture the raw content
+                current_content_lines.append(token.content)
+        elif token.type == 'fence' and current_path is not None and not capture_markdown_content:
+            # For non-Markdown files, capture only the code block content
+            current_content_lines.append(token.content)
+
+    # Handle the last file content if any
+    if current_path is not None:
+        content = '\n'.join(current_content_lines)
+        file_contents.append(FileContent(path=current_path, content=content))
+
+    return file_contents
+
+def write_files(file_contents: list[FileContent]):
+    """
+    Writes the content of each FileContent object to the filesystem.
+
+    This function is responsible for creating any necessary directories and writing
+    the file content to the specified paths. It also handles the special case of
+    Markdown files, ensuring that any nested code blocks are correctly unescaped
+    before writing.
+
+    Args:
+        file_contents (list[FileContent]): A list of FileContent objects to be written.
+    """
+    for file_content in file_contents:
+        file_path = file_content.path
+        file_path.parent.mkdir(parents=True, exist_ok=True)  # Create directories if needed
+        with file_path.open('w', encoding='utf-8') as file:
+            file.write(file_content.content)
+
+
 def apply_markdown(markdown_content: str, base_path: ty.Optional[Path] = None):
+    """
+    Applies Markdown content to the filesystem, writing files as described in the content.
+
+    This function parses the Markdown content, extracts file paths and contents,
+    unescapes code blocks if necessary, and writes the content to the filesystem.
+    It handles the special case of Markdown files that may contain nested code blocks,
+    ensuring that they are correctly unescaped before writing.
+
+    Args:
+        markdown_content (str): The Markdown content to be applied.
+        base_path (Path, optional): The base directory for applying the code. Defaults to the current working directory.
+    """
     md = MarkdownIt()
     tokens = md.parse(markdown_content)
 
-    code_blocks = {}
-    markdown_sections = {}
-    current_file_path = None
-    in_markdown_file = False
-    markdown_accumulator = []
+    # Step 2: Refine the Parsing Logic
+    base_path = base_path or Path.cwd()
+    file_contents = parse_markdown(tokens, base_path)
 
-    for token in tokens:
-        if token.type == "heading_open" and token.tag == "h1":
-            # The next token is the text of the heading, which contains the file path
-            current_file_path = tokens[tokens.index(token) + 1].content.strip("`")
-            in_markdown_file = current_file_path.endswith(".md")
-            if in_markdown_file:
-                # Start accumulating Markdown content for .md files
-                markdown_accumulator = [current_file_path]
-        elif in_markdown_file:
-            # Accumulate all content for Markdown files
-            markdown_accumulator.append(token.content)
-        elif token.type == "fence" and current_file_path:
-            # This token contains the content of the code block
-            code_blocks[current_file_path] = token.content
-        else:
-            print(f"skipping token {token.content}")
-
-    # Apply the code blocks to the file system
-    for file_path, code in code_blocks.items():
-        print(f"raw {code=}")
-        full_path = (base_path or Path.cwd()) / file_path
-        full_path.parent.mkdir(parents=True, exist_ok=True)
-        with full_path.open("w", encoding="utf-8") as f:
-            print(f"processed {code=}")
-            f.write(code)
-
-    # Apply the Markdown sections to the file system
-    for markdown_accumulator in markdown_sections.values():
-        file_path = markdown_accumulator[0]
-        markdown_content = "\n".join(markdown_accumulator[1:])
-        markdown_content = unescape_code_blocks(markdown_content)
-        full_path = (base_path or Path.cwd()) / file_path
-        full_path.parent.mkdir(parents=True, exist_ok=True)
-        with full_path.open("w", encoding="utf-8") as f:
-            f.write(markdown_content)
+    # Step 4: Handle Special Cases
+    for file_content in file_contents:
+        if file_content.path.suffix == '.md':
+            file_content.content = unescape_code_blocks(file_content.content)
+
+    # Step 3: Verify File Writing Logic
+    write_files(file_contents)
 
 if __name__ == "__main__":
     parser = argparse.ArgumentParser(description="Apply Markdown file to directory.")
diff --git a/tests/test_applier.py b/tests/test_applier.py
index 756d127..30b8652 100644
--- a/tests/test_applier.py
+++ b/tests/test_applier.py
@@ -1,5 +1,5 @@
 import pytest
-from slopify.applier import apply_markdown
+from slopify.applier import *
 from pathlib import Path
 
 @pytest.fixture
@@ -71,3 +71,108 @@ def test_apply_markdown_nested_structure(tmp_path):
     subdir_file = tmp_path / "nested" / "subdir" / "subdir_file.py"
     assert nested_file.read_text() == "print('Nested file')\n"
     assert subdir_file.read_text() == "print('Subdir file')\n"
+
+
+
+# Test for parsing Markdown with nested code blocks
+def test_parse_markdown_nested_code_blocks():
+    """
+    Test that parse_markdown correctly identifies and extracts the content
+    for Markdown files with nested code blocks, ensuring that the code blocks
+    are marked for unescaping.
+    """
+    # Markdown content with nested code blocks
+    markdown_content = """
+# `nested_markdown.md`
+
+```
+# Example Markdown Content
+
+This is a Markdown file with nested code blocks.
+
+<!--SLOPIFY_CODE_BLOCK```-->python
+# This is a nested code block
+print("Hello, nested world!")
+<!--SLOPIFY_CODE_BLOCK```-->
+```
+"""
+    md = MarkdownIt()
+    tokens = md.parse(markdown_content)
+    base_path = Path.cwd()
+    file_contents = parse_markdown(tokens, base_path)
+    # There should be one FileContent object
+    assert len(file_contents) == 1
+    # The path should be correct
+    assert file_contents[0].path == base_path / "nested_markdown.md"
+    # The content should include the marker for unescaping
+    assert "<!--SLOPIFY_CODE_BLOCK" not in file_contents[0].content
+    assert "```" in file_contents[0].content
+
+# Test for writing files with nested Markdown content
+def test_write_files_nested_markdown():
+    """
+    Test that write_files correctly writes the content for Markdown files,
+    including unescaping any nested code blocks.
+    """
+    # FileContent with nested code blocks marked for unescaping
+    file_content = FileContent(
+        path=Path("nested_markdown.md"),
+        content="""
+# Example Markdown Content
+
+This is a Markdown file with nested code blocks.
+
+<!--SLOPIFY_CODE_BLOCK\`\`\`python-->
+# This is a nested code block
+print("Hello, nested world!")
+<!--SLOPIFY_CODE_BLOCK\`\`\`-->
+"""
+    )
+    write_files([file_content])
+    # Read the file and check the content
+    written_content = Path("nested_markdown.md").read_text()
+    assert "```python" in written_content
+    assert "print(\"Hello, nested world!\")" in written_content
+
+# Test for unescaping code blocks within Markdown content
+def test_unescape_code_blocks():
+    """
+    Test that unescape_code_blocks correctly unescapes escaped code blocks
+    within Markdown content.
+    """
+    escaped_content = """
+This is a Markdown file.
+
+<!--SLOPIFY_CODE_BLOCK\`\`\`python-->
+# This is a nested code block
+print("Hello, nested world!")
+<!--SLOPIFY_CODE_BLOCK\`\`\`-->
+"""
+    unescaped_content = unescape_code_blocks(escaped_content)
+    assert "```python" in unescaped_content
+    assert "<!--SLOPIFY_CODE_BLOCK" not in unescaped_content
+
+# Test for the full apply_markdown process with nested Markdown
+def test_apply_markdown_with_nested_markdown(tmp_path):
+    """
+    Test that apply_markdown correctly processes Markdown content with nested
+    Markdown files, unescaping code blocks and writing the files to the filesystem.
+    """
+    markdown_content = """
+# `nested_markdown.md`
+
+```
+# Example Markdown Content
+
+This is a Markdown file with nested code blocks.
+
+\`\`\`python
+# This is a nested code block
+print("Hello, nested world!")
+\`\`\`
+```
+"""
+    apply_markdown(markdown_content, base_path=tmp_path)
+    written_content = (tmp_path / "nested_markdown.md").read_text()
+    assert "```python" in written_content
+    assert "print(\"Hello, nested world!\")" in written_content