forked from easybuilders/easybuild-easyconfigs
-
Notifications
You must be signed in to change notification settings - Fork 0
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Merge pull request easybuilders#21157 from pavelToman/20240808183956_…
…new_pr_miniprot013 {bio}[GCCcore/12.3.0] miniprot v0.13
- Loading branch information
Showing
1 changed file
with
33 additions
and
0 deletions.
There are no files selected for viewing
33 changes: 33 additions & 0 deletions
33
easybuild/easyconfigs/m/miniprot/miniprot-0.13-GCCcore-12.3.0.eb
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,33 @@ | ||
easyblock = "MakeCp" | ||
|
||
name = 'miniprot' | ||
version = '0.13' | ||
|
||
homepage = 'https://github.com/lh3/miniprot' | ||
description = """Miniprot aligns a protein sequence against a genome with affine gap penalty, splicing and frameshift. | ||
It is primarily intended for annotating protein-coding genes in a new species using known genes from other species. | ||
Miniprot is similar to GeneWise and Exonerate in functionality but it can map proteins to whole genomes and is much | ||
faster at the residue alignment step.""" | ||
|
||
toolchain = {'name': 'GCCcore', 'version': '12.3.0'} | ||
|
||
source_urls = ['https://github.com/lh3/miniprot/archive'] | ||
sources = [{'download_filename': 'v%(version)s.tar.gz', 'filename': SOURCE_TAR_GZ}] | ||
checksums = ['be12d98d998beb78e4e06350c03d2f188bcdf3245d6bcaf43e2cc80785a617a4'] | ||
|
||
builddependencies = [('binutils', '2.40')] | ||
dependencies = [('zlib', '1.2.13')] | ||
|
||
files_to_copy = [ | ||
(['*.h', 'miniprot.1', 'test', 'tex'], 'lib'), | ||
(['miniprot'], 'bin'), | ||
'README.md', | ||
'LICENSE.txt', | ||
] | ||
|
||
sanity_check_paths = { | ||
'files': ['bin/miniprot'], | ||
'dirs': ['lib'], | ||
} | ||
|
||
moduleclass = 'bio' |