From 2d09e6cc68fad30059a0ddf279c0745d83fcc853 Mon Sep 17 00:00:00 2001 From: Sam Isaacson Date: Sat, 26 Oct 2024 08:49:48 -0400 Subject: [PATCH] try to add PEtab back --- docs/Project.toml | 4 ++-- docs/pages.jl | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/docs/Project.toml b/docs/Project.toml index a009c89b8d..a303fe9720 100644 --- a/docs/Project.toml +++ b/docs/Project.toml @@ -27,6 +27,7 @@ OptimizationNLopt = "4e6fcdb7-1186-4e1f-a706-475e75c168bb" OptimizationOptimJL = "36348300-93cb-4f02-beb5-3c3902f8871e" OptimizationOptimisers = "42dfb2eb-d2b4-4451-abcd-913932933ac1" OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" +PEtab = "48d54b35-e43e-4a66-a5a1-dde6b987cf69" Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" QuasiMonteCarlo = "8a4e6c94-4038-4cdc-81c3-7e6ffdb2a71b" SciMLBase = "0bca4576-84f4-4d90-8ffe-ffa030f20462" @@ -35,7 +36,6 @@ SpecialFunctions = "276daf66-3868-5448-9aa4-cd146d93841b" StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" SteadyStateDiffEq = "9672c7b4-1e72-59bd-8a11-6ac3964bc41f" StochasticDiffEq = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0" -#StructuralIdentifiability = "220ca800-aa68-49bb-acd8-6037fa93a544" Symbolics = "0c5d862f-8b57-4792-8d23-62f2024744c7" [compat] @@ -65,6 +65,7 @@ OptimizationNLopt = "0.3" OptimizationOptimJL = "0.4" OptimizationOptimisers = "0.3" OrdinaryDiffEq = "6.80.1" +PEtab = "3.3.0" Plots = "1.40" QuasiMonteCarlo = "0.3" SciMLBase = "2.46" @@ -73,5 +74,4 @@ SpecialFunctions = "2.4" StaticArrays = "1.9" SteadyStateDiffEq = "2.2" StochasticDiffEq = "6.65" -#StructuralIdentifiability = "0.5.8" Symbolics = "5.30.1, 6" diff --git a/docs/pages.jl b/docs/pages.jl index bfb450d301..551cdc40bf 100644 --- a/docs/pages.jl +++ b/docs/pages.jl @@ -46,7 +46,7 @@ pages = Any[ ], "Inverse problems" => Any[ "inverse_problems/optimization_ode_param_fitting.md", - # "inverse_problems/petab_ode_param_fitting.md", + "inverse_problems/petab_ode_param_fitting.md", "inverse_problems/behaviour_optimisation.md", # "inverse_problems/structural_identifiability.md", "inverse_problems/global_sensitivity_analysis.md",