From c58154bba6de8c24c3fa83ccb814b5584f74c476 Mon Sep 17 00:00:00 2001
From: Saniya Khullar <sk792@georgetown.edu>
Date: Wed, 1 May 2024 12:12:33 -0500
Subject: [PATCH] updates by Saniya

---
 README.md | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/README.md b/README.md
index 494563d..06bc902 100644
--- a/README.md
+++ b/README.md
@@ -59,7 +59,9 @@ default_weight_new_edges. -->
     &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*edge_list*, <br>
     &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*beta_net = 1*, <br>
     &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*alpha_lasso = 0.01*, <br>
-    &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*default_edge_weight = 0.1*,<br>
+    &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*default_edge_weight = 0.01*,<br>
+    &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*edge_vals_for_d = True*,<br>
+    &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*w_transform_for_d = "none"*,<br>
     &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*degree_threshold = 0.5*,<br>
     &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*gene_expression_nodes = []*,<br>
     &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;*overlapped_nodes_only = False*,<br>