ci.yaml

name: CI

on: 
  push:
  pull_request:
  # To prevent PAT from expiring
  schedule:
    - cron:  '0 17 1 * *'


jobs:

  test:
    runs-on: ubuntu-latest
    steps:

      - name: Git Checkout
        id: git_checkout
        uses: actions/checkout@v2

      - name: Setup Python
        id: setup_python
        uses: actions/setup-python@v1
        with:
          python-version: '3.7'

      - name: Setup Test Environment
        id: setup_test_environment
        run: |
          python -m pip install pipenv
          pipenv install --dev
          short_sha=${GITHUB_SHA::8}
          echo "SHORT_SHA=$short_sha" >> $GITHUB_ENV

          # create synapse config file for integration test
          OUTPUT_FILE=/tmp/.synapseConfig
          cat > "$OUTPUT_FILE" << EOM
          [authentication]
          authtoken = ${{secrets.SYNAPSE_PAT}}
          EOM
          chmod +x "$OUTPUT_FILE"
      - name: Test CWL
        id: test_cwl
        run: |
          pipenv run cwltest --test tests/test-descriptions.yaml --tool cwl-runner
  # tag:
  #   if: "!contains(github.event.head_commit.message, '[skip-ci]')"
  #   runs-on: ubuntu-latest
  #   needs: test
  #   steps:

  #     - name: Git Checkout
  #       id: git_checkout
  #       uses: actions/checkout@v2

  #     - name: Tag
  #       id: tag
  #       uses: mathieudutour/github-tag-action@v4.2
  #       with:
  #         github_token: ${{ secrets.GITHUB_TOKEN }}
  #         default_bump: patch
  #         release_branches: master