diff --git a/CHANGELOG.md b/CHANGELOG.md
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# Changelog
+## 2.35 (OWL 2)
+- Added algorithms and characteristics for attractor methods in mpbn
+
## 2.34 (OWL 2)
- Added organizational 'DAE solver' (`KISAO_0000699`) for collecting solvers that can solve DAE problems.
- Removed 'has characteristic' some 'differential-algebraic equation problem' from KINSOL and from 'method for solving a system of linear equations'.
diff --git a/kisao.owl b/kisao.owl
index 174b10e..70dd2ee 100644
--- a/kisao.owl
+++ b/kisao.owl
@@ -14027,7 +14027,13 @@ This method only involves evaluations of f. This method is suitable for non-stif
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2021-07-08
@@ -14063,6 +14069,12 @@ This method only involves evaluations of f. This method is suitable for non-stif
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2021-07-08
JRK
true
@@ -14076,6 +14088,12 @@ This method only involves evaluations of f. This method is suitable for non-stif
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2021-07-08
JRK
true
@@ -15081,6 +15099,258 @@ This method only involves evaluations of f. This method is suitable for non-stif
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+ 2022-01-20
+ JRK
+ LP
+ logical network
+ A network of logical-valued (an enumeration, such as a set of integers) variables.
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+ 2022-01-20
+ JRK
+ LP
+ boolean network
+ A network of Boolean-valued variables.
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+
+ 2022-01-20
+ JRK
+ LP
+ locally-monotone Boolean network
+ Boolean network where each regulator is either an activator or an inhibitor, but cannot be both.
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+
+ 2022-01-20
+ JRK
+ logical variable
+ A variable whose value can be one of an enumerated set of possible values such as ON/OFF, HIGH/MEDIUM/LOW, or a set integers (e.g., 0, 1, 2).
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+ 2022-01-20
+ JRK
+ Boolean variable
+ A variable whose value can be TRUE/FALSE (e.g., ON/OFF, YES/NO, 1/0).
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+ 2022-01-20
+ JRK
+ LP
+ most permissive updating policy
+ http://identifiers.org/doi:10.1038/s41467-020-18112-5
+ The most permissive updating policy captures behaviors of any compatible quantitative model.
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+
+
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+ http://identifiers.org/doi:10.1038/s41467-020-18112-5
+ Loïc Paulevé, Juraj Kolčák, Thomas Chatain, Stefan Haar. Reconciling qualitative, abstract, and scalable modeling of biological networks. Nat Commun 11(1):4256 (2020).
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+ 2022-01-20
+ JRK
+ LP
+ http://identifiers.org/biosimulators/mpbn
+ Paulevé ASP-based fixed point identification
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+
+
+
+ http://identifiers.org/biosimulators/mpbn
+ mpbn
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+ 2022-01-20
+ JRK
+ LP
+ http://identifiers.org/biosimulators/mpbn
+ Paulevé ASP-based minimal trap space identification
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+
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+ http://identifiers.org/biosimulators/mpbn
+ mpbn
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+ 2022-01-20
+ JRK
+ LP
+ http://identifiers.org/biosimulators/mpbn
+ logical model attractor identification method
+
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+
+
+ http://identifiers.org/biosimulators/mpbn
+ mpbn
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+ 2022-01-20
+ JRK
+ LP
+ http://identifiers.org/biosimulators/mpbn
+ Paulevé ASP-based most permissive attractor identification
+
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+
+
+ http://identifiers.org/biosimulators/mpbn
+ mpbn
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+ 2022-01-20
+ JRK
+ trap space
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+ 2022-01-20
+ JRK
+ stable state
+ steady state
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+ 2022-01-20
+ JRK
+ minimal trap space
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+ 2022-01-20
+ JRK
+ attractor
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+
@@ -16671,7 +16941,5 @@ This method only involves evaluations of f. This method is suitable for non-stif
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-
diff --git a/kisao_full.owl b/kisao_full.owl
index 62c4a6c..4ed1127 100644
--- a/kisao_full.owl
+++ b/kisao_full.owl
@@ -19,7 +19,7 @@
Kinetic Simulation Algorithm Ontology (full version, containing deprecated classes)
http://co.mbine.org/standards/kisao
http://identifiers.org/pubmed/22027554
- 2.34
+ 2.35
The Kinetic Simulation Algorithm Ontology (KiSAO) classifies algorithms available for the simulation and analysis of models in biology, and their characteristics and the parameters required for their use.