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Full join instead of inner join cohorts together #5

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jackhump opened this issue May 24, 2022 · 0 comments
Open

Full join instead of inner join cohorts together #5

jackhump opened this issue May 24, 2022 · 0 comments
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@jackhump
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Current code inner joins SNP-Gene pairs recursively across cohorts, meaning that the eventual meta-analysis can only be run on the SNP-Genes present in every cohort. This was due to RE2C failing on missing values.

ACTION:

Swap out inner join to a full join, figure out how to make RE2C happy. If necessary, let RE2C step throw out SNP-Genes with missing rows. Not ideal.

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