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recetox-xmsannotator: simple annotation #612

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hechth opened this issue Nov 18, 2024 · 0 comments
Open

recetox-xmsannotator: simple annotation #612

hechth opened this issue Nov 18, 2024 · 0 comments

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@hechth
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hechth commented Nov 18, 2024

Create a wrapper for the simple_annotation function.

Inputs

  • peak metadata_table from recetox-aplcms
  • compound_table -> tabular, csv, parquet
  • adduct_table -> tabular, csv, parquet
  • mass_tolerance in ppm -> float, needs to be converted to ppm for the tool as the tool does expect tolerances in Da

Outputs

  • annotation table -> tabular

You can use this file as peak table input for parquet as test data
variable_metadata.zip

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