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DESCRIPTION
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DESCRIPTION
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Package: MFAssignR
Type: Package
Title: An R Package for Data Preparation and Molecular Formula Assignment
Version: 1.1.2
Author: Simeon Schum, Lynn Mazzoleni, Laura Brown
Maintainer: Simeon Schum, <[email protected]>
Description: This package contains functions that can estimate
the signal-to-noise for raw mass spectra, provide
preliminary identification of potential isotopic masses,
recalibrate mass spectral data, and assign molecular formulas
to exact mass measurements from ultrahigh resolution mass spectral
data using either Orbitrap MS or FT-ICR MS. The core algorithm for
formula assignment is the CHOFIT algorithm developed by
Green and Perdue, Anal. Chem. (2015). This algorithm has
been expanded on, using formula extension to increase its
performance and data quality.
License: GNU GPL-2
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.4.1)
Imports: dplyr (>= 0.7.6),
tidyr (>= 0.8.1),
ggplot2 (>= 3.0.0),
colorRamps (>= 2.3),
gtools (>= 3.9.5)
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Suggests: knitr,
rmarkdown,
patrick (>= 0.2.0)
VignetteBuilder: knitr
Config/testthat/edition: 3