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DESCRIPTION
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Package: CoVarNet
Title: Multicellular co-occurring network
Version: 0.2.0
Authors@R: c(
person(given = "Qiang", family = "Shi",
email = "[email protected]", role = c("aut", "cre"),
comment = c(ORCID = "0000-0003-1851-773X")),
person(given = "Yihan", family = "Chen",
email = "[email protected]", role = c("ctb"))
)
Description: CoVarNet is a computational framework aiming to unravel the coordination among multiple cell types by analyzing the covariance in the frequencies of cell types across various samples.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
biocViews:
Imports:
circlize,
cluster,
ComplexHeatmap,
ggsci,
grid,
psych,
RColorBrewer,
viridis,
tidytext,
dendextend,
sp,
spdep
Depends:
dplyr,
ggplot2,
igraph,
NMF,
Seurat
LazyData: true