This will shift the points to the left, so we need to re-upload them all. We (I) did this once. I could do it again if needed.

@mlocardpaulet We must wait with the merge, until we set up a way to recompute all the points?

@mlocardpaulet We must wait with the merge, until we set up a way to recompute all the points?

Yes. I think that this is necessary.

@mlocardpaulet We must wait with the merge, until we set up a way to recompute all the points?

Yes. I think that this is necessary.

Would like to get this up and going ASAP. Should be done before Christmas.

@mlocardpaulet We must wait with the merge, until we set up a way to recompute all the points?

Yes. I think that this is necessary.

Would like to get this up and going ASAP. Should be done before Christmas.

In the end, the idea is to:

• have the plot with mean values showing up by default when opening the module page
• have a switch button that would allow to plot the median for all points (instead of mean).

Now the mean AND median are calculated at each submission, but we do not have the median values for points that were uploaded before now.

There is an issue opened for setting up the automatic re-running of all points already submitted (while keeping their unique ID and associated comments): #470. Since the "main" plot will not change, maybe we do not have to wait for the issue to be fixed. The only thing is that until we are able to re-run everything there will have points missing in the plot with the median?

Mentioned in original issue, but relevant here too:
#436 (comment)

@mlocardpaulet We must wait with the merge, until we set up a way to recompute all the points?

Yes. I think that this is necessary.

Would like to get this up and going ASAP. Should be done before Christmas.

In the end, the idea is to:

• have the plot with mean values showing up by default when opening the module page
• have a switch button that would allow to plot the median for all points (instead of mean).

Now the mean AND median are calculated at each submission, but we do not have the median values for points that were uploaded before now.

There is an issue opened for setting up the automatic re-running of all points already submitted (while keeping their unique ID and associated comments): #470. Since the "main" plot will not change, maybe we do not have to wait for the issue to be fixed. The only thing is that until we are able to re-run everything there will have points missing in the plot with the median?

Saving of the raw data is implemented. Only thing that remains is a notebook that allows for automatic reuploading. But I think we should do that manually for now. Are you OK with that?

Automatic reupload should be done from:

https://proteobench.cubimed.rub.de/datasets/

As this is currently not supported (most saved submissions are wrong; or incomplete). Only in the latest version everything is correct.

@mlocardpaulet We must wait with the merge, until we set up a way to recompute all the points?

Yes. I think that this is necessary.

Would like to get this up and going ASAP. Should be done before Christmas.

In the end, the idea is to:

• have the plot with mean values showing up by default when opening the module page
• have a switch button that would allow to plot the median for all points (instead of mean).

Now the mean AND median are calculated at each submission, but we do not have the median values for points that were uploaded before now.
There is an issue opened for setting up the automatic re-running of all points already submitted (while keeping their unique ID and associated comments): #470. Since the "main" plot will not change, maybe we do not have to wait for the issue to be fixed. The only thing is that until we are able to re-run everything there will have points missing in the plot with the median?

Saving of the raw data is implemented. Only thing that remains is a notebook that allows for automatic reuploading. But I think we should do that manually for now. Are you OK with that?

Automatic reupload should be done from:

https://proteobench.cubimed.rub.de/datasets/

As this is currently not supported (most saved submissions are wrong; or incomplete). Only in the latest version everything is correct.

Yes, thanks. Manual re-upload with a Jupiter notebook is great.
If the old submissions cannot be reloaded, we can add them again. I can make this Happen (Holda has all the MQ data, Olivier can re-upload the i2MassChroQ, not sure about alphapept but I can find out).
We'll just need to "clean up" the server and remove all wrong submissions.
Just let me know when we want to do that and if/how I can help.