swinLayers.py

import logging
import math
from functools import partial
from typing import Optional

import torch
import torch.nn as nn
from timm.data import IMAGENET_DEFAULT_MEAN, IMAGENET_DEFAULT_STD
from typing import Callable
import collections
from itertools import repeat
import warnings

_autowrap_functions = set()

def register_notrace_function(func: Callable):
    """
    Decorator for functions which ought not to be traced through
    """
    _autowrap_functions.add(func)
    return func

def _ntuple(n):
    def parse(x):
        if isinstance(x, collections.abc.Iterable) and not isinstance(x, str):
            return x
        return tuple(repeat(x, n))
    return parse
to_2tuple = _ntuple(2)


class PatchEmbed(nn.Module):
    """ 2D Image to Patch Embedding
    """
    def __init__(self, img_size=224, patch_size=16, in_chans=3, embed_dim=768, norm_layer=None, flatten=True):
        super().__init__()
        img_size = to_2tuple(img_size)
        patch_size = to_2tuple(patch_size)
        self.img_size = img_size
        self.patch_size = patch_size
        self.grid_size = (img_size[0] // patch_size[0], img_size[1] // patch_size[1])
        self.num_patches = self.grid_size[0] * self.grid_size[1]
        self.flatten = flatten

        self.proj = nn.Conv2d(in_chans, embed_dim, kernel_size=patch_size, stride=patch_size)
        self.norm = norm_layer(embed_dim) if norm_layer else nn.Identity()

    def forward(self, x):
        B, C, H, W = x.shape
        assert H == self.img_size[0], f"Input image height ({H}) doesn't match model ({self.img_size[0]})."
        assert W == self.img_size[1], f"Input image width ({W}) doesn't match model ({self.img_size[1]})."

        x = self.proj(x)
        if self.flatten:
            x = x.flatten(2).transpose(1, 2)  # BCHW -> BNC
        x = self.norm(x)
        return x

class Mlp(nn.Module):
    """ MLP as used in Vision Transformer, MLP-Mixer and related networks
    """
    def __init__(self, in_features, hidden_features=None, out_features=None, act_layer=nn.GELU, bias=True, drop=0.):
        super().__init__()
        out_features = out_features or in_features
        hidden_features = hidden_features or in_features
        bias = to_2tuple(bias)
        drop_probs = to_2tuple(drop)

        self.fc1 = nn.Linear(in_features, hidden_features, bias=bias[0])
        self.act = act_layer()
        self.drop1 = nn.Dropout(drop_probs[0])
        self.fc2 = nn.Linear(hidden_features, out_features, bias=bias[1])
        self.drop2 = nn.Dropout(drop_probs[1])

    def forward(self, x):
        x = self.fc1(x)
        x = self.act(x)
        x = self.drop1(x)
        x = self.fc2(x)
        x = self.drop2(x)
        return x


def drop_path(x, drop_prob: float = 0., training: bool = False, scale_by_keep: bool = True):
    """Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks).

    This is the same as the DropConnect impl I created for EfficientNet, etc networks, however,
    the original name is misleading as 'Drop Connect' is a different form of dropout in a separate paper...
    See discussion: https://github.com/tensorflow/tpu/issues/494#issuecomment-532968956 ... I've opted for
    changing the layer and argument names to 'drop path' rather than mix DropConnect as a layer name and use
    'survival rate' as the argument.

    """
    if drop_prob == 0. or not training:
        return x
    keep_prob = 1 - drop_prob
    shape = (x.shape[0],) + (1,) * (x.ndim - 1)  # work with diff dim tensors, not just 2D ConvNets
    random_tensor = x.new_empty(shape).bernoulli_(keep_prob)
    if keep_prob > 0.0 and scale_by_keep:
        random_tensor.div_(keep_prob)
    return x * random_tensor

class DropPath(nn.Module):
    """Drop paths (Stochastic Depth) per sample  (when applied in main path of residual blocks).
    """
    def __init__(self, drop_prob: float = 0., scale_by_keep: bool = True):
        super(DropPath, self).__init__()
        self.drop_prob = drop_prob
        self.scale_by_keep = scale_by_keep

    def forward(self, x):
        return drop_path(x, self.drop_prob, self.training, self.scale_by_keep)

    def extra_repr(self):
        return f'drop_prob={round(self.drop_prob,3):0.3f}'



def _no_grad_trunc_normal_(tensor, mean, std, a, b):
    # Cut & paste from PyTorch official master until it's in a few official releases - RW
    # Method based on https://people.sc.fsu.edu/~jburkardt/presentations/truncated_normal.pdf
    def norm_cdf(x):
        # Computes standard normal cumulative distribution function
        return (1. + math.erf(x / math.sqrt(2.))) / 2.

    if (mean < a - 2 * std) or (mean > b + 2 * std):
        warnings.warn("mean is more than 2 std from [a, b] in nn.init.trunc_normal_. "
                      "The distribution of values may be incorrect.",
                      stacklevel=2)

    with torch.no_grad():
        # Values are generated by using a truncated uniform distribution and
        # then using the inverse CDF for the normal distribution.
        # Get upper and lower cdf values
        l = norm_cdf((a - mean) / std)
        u = norm_cdf((b - mean) / std)

        # Uniformly fill tensor with values from [l, u], then translate to
        # [2l-1, 2u-1].
        tensor.uniform_(2 * l - 1, 2 * u - 1)

        # Use inverse cdf transform for normal distribution to get truncated
        # standard normal
        tensor.erfinv_()

        # Transform to proper mean, std
        tensor.mul_(std * math.sqrt(2.))
        tensor.add_(mean)

        # Clamp to ensure it's in the proper range
        tensor.clamp_(min=a, max=b)
        return tensor


def trunc_normal_(tensor, mean=0., std=1., a=-2., b=2.):
    # type: (Tensor, float, float, float, float) -> Tensor
    return _no_grad_trunc_normal_(tensor, mean, std, a, b)


_logger = logging.getLogger(__name__)



def window_partition(x, window_size: int):
    """
    Args:
        x: (B, H, W, C)
        window_size (int): window size

    Returns:
        windows: (num_windows*B, window_size, window_size, C)
    """
    B, H, W, C = x.shape
    x = x.view(B, H // window_size, window_size, W // window_size, window_size, C)
    windows = x.permute(0, 1, 3, 2, 4, 5).contiguous().view(-1, window_size, window_size, C)
    return windows


@register_notrace_function  # reason: int argument is a Proxy
def window_reverse(windows, window_size: int, H: int, W: int):
    """
    Args:
        windows: (num_windows*B, window_size, window_size, C)
        window_size (int): Window size
        H (int): Height of image
        W (int): Width of image

    Returns:
        x: (B, H, W, C)
    """
    B = int(windows.shape[0] / (H * W / window_size / window_size))
    x = windows.view(B, H // window_size, W // window_size, window_size, window_size, -1)
    x = x.permute(0, 1, 3, 2, 4, 5).contiguous().view(B, H, W, -1)
    return x


def get_relative_position_index(win_h, win_w):
    # get pair-wise relative position index for each token inside the window
    coords = torch.stack(torch.meshgrid([torch.arange(win_h), torch.arange(win_w)]))  # 2, Wh, Ww
    coords_flatten = torch.flatten(coords, 1)  # 2, Wh*Ww
    relative_coords = coords_flatten[:, :, None] - coords_flatten[:, None, :]  # 2, Wh*Ww, Wh*Ww
    relative_coords = relative_coords.permute(1, 2, 0).contiguous()  # Wh*Ww, Wh*Ww, 2
    relative_coords[:, :, 0] += win_h - 1  # shift to start from 0
    relative_coords[:, :, 1] += win_w - 1
    relative_coords[:, :, 0] *= 2 * win_w - 1
    return relative_coords.sum(-1)  # Wh*Ww, Wh*Ww


class WindowAttention(nn.Module):
    r""" Window based multi-head self attention (W-MSA) module with relative position bias.
    It supports both of shifted and non-shifted window.

    Args:
        dim (int): Number of input channels.
        num_heads (int): Number of attention heads.
        head_dim (int): Number of channels per head (dim // num_heads if not set)
        window_size (tuple[int]): The height and width of the window.
        qkv_bias (bool, optional):  If True, add a learnable bias to query, key, value. Default: True
        attn_drop (float, optional): Dropout ratio of attention weight. Default: 0.0
        proj_drop (float, optional): Dropout ratio of output. Default: 0.0
    """

    def __init__(self, dim, num_heads, head_dim=None, window_size=7, qkv_bias=True, attn_drop=0., proj_drop=0.):

        super().__init__()
        self.dim = dim
        self.window_size = to_2tuple(window_size)  # Wh, Ww
        win_h, win_w = self.window_size
        self.window_area = win_h * win_w
        self.num_heads = num_heads
        head_dim = head_dim or dim // num_heads
        attn_dim = head_dim * num_heads
        self.scale = head_dim ** -0.5

        # define a parameter table of relative position bias, shape: 2*Wh-1 * 2*Ww-1, nH
        self.relative_position_bias_table = nn.Parameter(torch.zeros((2 * win_h - 1) * (2 * win_w - 1), num_heads))

        # get pair-wise relative position index for each token inside the window
        self.register_buffer("relative_position_index", get_relative_position_index(win_h, win_w))

        self.qkv = nn.Linear(dim, attn_dim * 3, bias=qkv_bias)
        self.attn_drop = nn.Dropout(attn_drop)
        self.proj = nn.Linear(attn_dim, dim)
        self.proj_drop = nn.Dropout(proj_drop)

        trunc_normal_(self.relative_position_bias_table, std=.02)
        self.softmax = nn.Softmax(dim=-1)

    def _get_rel_pos_bias(self) -> torch.Tensor:
        relative_position_bias = self.relative_position_bias_table[
            self.relative_position_index.view(-1)].view(self.window_area, self.window_area, -1)  # Wh*Ww,Wh*Ww,nH
        relative_position_bias = relative_position_bias.permute(2, 0, 1).contiguous()  # nH, Wh*Ww, Wh*Ww
        return relative_position_bias.unsqueeze(0)

    def forward(self, x, mask: Optional[torch.Tensor] = None):
        """
        Args:
            x: input features with shape of (num_windows*B, N, C)
            mask: (0/-inf) mask with shape of (num_windows, Wh*Ww, Wh*Ww) or None
        """
        B_, N, C = x.shape
        qkv = self.qkv(x).reshape(B_, N, 3, self.num_heads, -1).permute(2, 0, 3, 1, 4)
        q, k, v = qkv.unbind(0)  # make torchscript happy (cannot use tensor as tuple)

        q = q * self.scale
        attn = (q @ k.transpose(-2, -1))
        attn = attn + self._get_rel_pos_bias()

        if mask is not None:
            num_win = mask.shape[0]
            attn = attn.view(B_ // num_win, num_win, self.num_heads, N, N) + mask.unsqueeze(1).unsqueeze(0)
            attn = attn.view(-1, self.num_heads, N, N)
            attn = self.softmax(attn)
        else:
            attn = self.softmax(attn)

        attn = self.attn_drop(attn)

        x = (attn @ v).transpose(1, 2).reshape(B_, N, -1)
        x = self.proj(x)
        x = self.proj_drop(x)
        return x




class SwinTransformerBlock(nn.Module):
    r""" Swin Transformer Block.

    Args:
        dim (int): Number of input channels.
        input_resolution (tuple[int]): Input resulotion.
        window_size (int): Window size.
        num_heads (int): Number of attention heads.
        head_dim (int): Enforce the number of channels per head
        shift_size (int): Shift size for SW-MSA.
        mlp_ratio (float): Ratio of mlp hidden dim to embedding dim.
        qkv_bias (bool, optional): If True, add a learnable bias to query, key, value. Default: True
        drop (float, optional): Dropout rate. Default: 0.0
        attn_drop (float, optional): Attention dropout rate. Default: 0.0
        drop_path (float, optional): Stochastic depth rate. Default: 0.0
        act_layer (nn.Module, optional): Activation layer. Default: nn.GELU
        norm_layer (nn.Module, optional): Normalization layer.  Default: nn.LayerNorm
    """

    def __init__(
            self, dim, input_resolution, num_heads=4, head_dim=None, window_size=7, shift_size=0,
            mlp_ratio=4., qkv_bias=True, drop=0., attn_drop=0., drop_path=0.,
            act_layer=nn.GELU, norm_layer=nn.LayerNorm):
        super().__init__()
        self.dim = dim
        self.input_resolution = input_resolution
        self.window_size = window_size
        self.shift_size = shift_size
        self.mlp_ratio = mlp_ratio
        if min(self.input_resolution) <= self.window_size:
            # if window size is larger than input resolution, we don't partition windows
            self.shift_size = 0
            self.window_size = min(self.input_resolution)
        assert 0 <= self.shift_size < self.window_size, "shift_size must in 0-window_size"

        self.norm1 = norm_layer(dim)
        self.attn = WindowAttention(
            dim, num_heads=num_heads, head_dim=head_dim, window_size=to_2tuple(self.window_size),
            qkv_bias=qkv_bias, attn_drop=attn_drop, proj_drop=drop)

        self.drop_path = DropPath(drop_path) if drop_path > 0. else nn.Identity()
        self.norm2 = norm_layer(dim)
        self.mlp = Mlp(in_features=dim, hidden_features=int(dim * mlp_ratio), act_layer=act_layer, drop=drop)

        if self.shift_size > 0:
            # calculate attention mask for SW-MSA
            H, W = self.input_resolution
            img_mask = torch.zeros((1, H, W, 1))  # 1 H W 1
            cnt = 0
            for h in (
                    slice(0, -self.window_size),
                    slice(-self.window_size, -self.shift_size),
                    slice(-self.shift_size, None)):
                for w in (
                        slice(0, -self.window_size),
                        slice(-self.window_size, -self.shift_size),
                        slice(-self.shift_size, None)):
                    img_mask[:, h, w, :] = cnt
                    cnt += 1
            mask_windows = window_partition(img_mask, self.window_size)  # num_win, window_size, window_size, 1
            mask_windows = mask_windows.view(-1, self.window_size * self.window_size)
            attn_mask = mask_windows.unsqueeze(1) - mask_windows.unsqueeze(2)
            attn_mask = attn_mask.masked_fill(attn_mask != 0, float(-100.0)).masked_fill(attn_mask == 0, float(0.0))
        else:
            attn_mask = None

        self.register_buffer("attn_mask", attn_mask)

    def forward(self, x):
        H, W = self.input_resolution
        B, L, C = x.shape
        assert L == H * W, "input feature has wrong size"

        shortcut = x
        x = self.norm1(x)
        x = x.view(B, H, W, C)

        # cyclic shift
        if self.shift_size > 0:
            shifted_x = torch.roll(x, shifts=(-self.shift_size, -self.shift_size), dims=(1, 2))
        else:
            shifted_x = x

        # partition windows
        x_windows = window_partition(shifted_x, self.window_size)  # num_win*B, window_size, window_size, C
        x_windows = x_windows.view(-1, self.window_size * self.window_size, C)  # num_win*B, window_size*window_size, C

        # W-MSA/SW-MSA
        attn_windows = self.attn(x_windows, mask=self.attn_mask)  # num_win*B, window_size*window_size, C

        # merge windows
        attn_windows = attn_windows.view(-1, self.window_size, self.window_size, C)
        shifted_x = window_reverse(attn_windows, self.window_size, H, W)  # B H' W' C

        # reverse cyclic shift
        if self.shift_size > 0:
            x = torch.roll(shifted_x, shifts=(self.shift_size, self.shift_size), dims=(1, 2))
        else:
            x = shifted_x
        x = x.view(B, H * W, C)

        # FFN
        x = shortcut + self.drop_path(x)
        x = x + self.drop_path(self.mlp(self.norm2(x)))

        return x



class PatchMerging(nn.Module):
    r""" Patch Merging Layer.

    Args:
        input_resolution (tuple[int]): Resolution of input feature.
        dim (int): Number of input channels.
        norm_layer (nn.Module, optional): Normalization layer.  Default: nn.LayerNorm
    """

    def __init__(self, input_resolution, dim, out_dim=None, norm_layer=nn.LayerNorm):
        super().__init__()
        self.input_resolution = input_resolution
        self.dim = dim
        self.out_dim = out_dim or 2 * dim
        self.norm = norm_layer(4 * dim)
        self.reduction = nn.Linear(4 * dim, self.out_dim, bias=False)

    def forward(self, x):
        """
        x: B, H*W, C
        """
        H, W = self.input_resolution
        B, L, C = x.shape
        assert L == H * W, "input feature has wrong size"
        assert H % 2 == 0 and W % 2 == 0, f"x size ({H}*{W}) are not even."

        x = x.view(B, H, W, C)

        x0 = x[:, 0::2, 0::2, :]  # B H/2 W/2 C
        x1 = x[:, 1::2, 0::2, :]  # B H/2 W/2 C
        x2 = x[:, 0::2, 1::2, :]  # B H/2 W/2 C
        x3 = x[:, 1::2, 1::2, :]  # B H/2 W/2 C
        x = torch.cat([x0, x1, x2, x3], -1)  # B H/2 W/2 4*C
        x = x.view(B, -1, 4 * C)  # B H/2*W/2 4*C

        x = self.norm(x)
        x = self.reduction(x)

        return x


class BasicLayer(nn.Module):
    """ A basic Swin Transformer layer for one stage.

    Args:
        dim (int): Number of input channels.
        input_resolution (tuple[int]): Input resolution.
        depth (int): Number of blocks.
        num_heads (int): Number of attention heads.
        head_dim (int): Channels per head (dim // num_heads if not set)
        window_size (int): Local window size.
        mlp_ratio (float): Ratio of mlp hidden dim to embedding dim.
        qkv_bias (bool, optional): If True, add a learnable bias to query, key, value. Default: True
        drop (float, optional): Dropout rate. Default: 0.0
        attn_drop (float, optional): Attention dropout rate. Default: 0.0
        drop_path (float | tuple[float], optional): Stochastic depth rate. Default: 0.0
        norm_layer (nn.Module, optional): Normalization layer. Default: nn.LayerNorm
        downsample (nn.Module | None, optional): Downsample layer at the end of the layer. Default: None
    """

    def __init__(
            self, dim, out_dim, input_resolution, depth, num_heads=4, head_dim=None,
            window_size=7, mlp_ratio=4., qkv_bias=True, drop=0., attn_drop=0.,
            drop_path=0., norm_layer=nn.LayerNorm, downsample=None):

        super().__init__()
        self.dim = dim
        self.input_resolution = input_resolution
        self.depth = depth
        self.grad_checkpointing = False

        # build blocks
        self.blocks = nn.Sequential(*[
            SwinTransformerBlock(
                dim=dim, input_resolution=input_resolution, num_heads=num_heads, head_dim=head_dim,
                window_size=window_size, shift_size=0 if (i % 2 == 0) else window_size // 2,
                mlp_ratio=mlp_ratio, qkv_bias=qkv_bias, drop=drop, attn_drop=attn_drop,
                drop_path=drop_path[i] if isinstance(drop_path, list) else drop_path, norm_layer=norm_layer)
            for i in range(depth)])

        # patch merging layer
        if downsample is not None:
            self.downsample = downsample(input_resolution, dim=dim, out_dim=out_dim, norm_layer=norm_layer)
        else:
            self.downsample = None

    def forward(self, x):
        if self.grad_checkpointing and not torch.jit.is_scripting():
            x = checkpoint_seq(self.blocks, x)
        else:
            x = self.blocks(x)
        if self.downsample is not None:
            x = self.downsample(x)
        return x