fix(flag_nonwear): dropna when recalculating wear time stats #163
Workflow file for this run
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| name: cwa-windows | |
| on: | |
| push: | |
| branches: | |
| - '**' | |
| pull_request: | |
| jobs: | |
| cwa-windows: | |
| runs-on: ${{matrix.os}} | |
| strategy: | |
| matrix: | |
| os: [windows-latest] | |
| python-version: ["3.8", "3.9", "3.10", "3.11"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Setup Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Setup java | |
| uses: actions/setup-java@v4 | |
| with: | |
| distribution: 'zulu' | |
| java-version: '8' | |
| - name: Compile java files | |
| run: | | |
| java -version | |
| javac src\actipy\*.java | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install . | |
| python -m pip install pytest joblib | |
| - name: Download test file | |
| run: | | |
| mkdir tests\data | |
| curl --output-dir tests\data\ -O https://wearables-files.ndph.ox.ac.uk/files/data/samples/ax3/tiny-sample.cwa.gz | |
| curl --output-dir tests\data\ -O https://wearables-files.ndph.ox.ac.uk/files/actipy/tests/data/read.csv.gz | |
| curl --output-dir tests\data\ -O https://wearables-files.ndph.ox.ac.uk/files/actipy/tests/data/lowpass.csv.gz | |
| curl --output-dir tests\data\ -O https://wearables-files.ndph.ox.ac.uk/files/actipy/tests/data/calib.csv.gz | |
| curl --output-dir tests\data\ -O https://wearables-files.ndph.ox.ac.uk/files/actipy/tests/data/nonwear.csv.gz | |
| curl --output-dir tests\data\ -O https://wearables-files.ndph.ox.ac.uk/files/actipy/tests/data/resample.csv.gz | |
| copy tests\data\tiny-sample.cwa.gz tests\data\tiny-sample1.cwa.gz # make copies for multiprocessing test | |
| copy tests\data\tiny-sample.cwa.gz tests\data\tiny-sample2.cwa.gz | |
| - name: Test with pytest | |
| run: | | |
| echo "########## NOTE ##########" | |
| echo "Windows access violation error can be safely ignored. See: https://github.com/jpype-project/jpype/issues/561" | |
| pytest tests |