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Merge pull request #550 from OuhscBbmc/dev #640

Merge pull request #550 from OuhscBbmc/dev

Merge pull request #550 from OuhscBbmc/dev #640

# For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag.
# https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions
on:
push:
branches-ignore:
# Ignore the pkgdown pages.
- 'gh-pages'
pull_request:
branches:
- main
- master
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.os }}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
strategy:
fail-fast: false
matrix:
# config:
# - {os: ubuntu-latest, r: 'release'}
# - {os: macOS-latest, r: 'release', http-user-agent: 'release', ONLY_READ_TESTS: true}
# - {os: windows-latest, r: 'release'}
os: [ubuntu-latest]
include:
- os: ubuntu-latest
# os: [windows-latest]
# include:
# - os: windows-latest
steps:
- uses: actions/checkout@v4
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2
with:
# r-version: ${{ matrix.config.r }}
# http-user-agent: ${{ matrix.config.http-user-agent }}
# ONLY_READ_TESTS: ${{ matrix.config.ONLY_READ_TESTS }}
use-public-rspm: true
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: rcmdcheck
# extra-packages: rcmdcheck, DBI=?ignore, odbc=?ignore
- uses: r-lib/actions/check-r-package@v2
# with:
# ONLY_READ_TESTS: ${{ matrix.config.ONLY_READ_TESTS }}
- name: Show testthat output
if: always()
run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash
- name: Test coverage
run: covr::codecov()
shell: Rscript {0}